SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    111601 2w69:D (2.05) BS01 MN 3.1.-.- GO:0003723 ... P31343 19194459
    111602 2w69:D (2.05) BS02 MN 3.1.-.- GO:0003723 ... P31343 19194459
    111603 2w6c:X (2.69) BS01 BM4 3.1.1.7 GO:0001507 ... P04058 19326912
    111604 2w6d:A (9.0) BS01 GDP 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111605 2w6d:A (9.0) BS02 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111606 2w6d:A (9.0) BS03 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111607 2w6d:A (9.0) BS04 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111608 2w6d:A (9.0) BS05 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111609 2w6d:A (9.0) BS06 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111610 2w6d:A (9.0) BS07 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111611 2w6d:A (9.0) BS08 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111612 2w6d:A (9.0) BS09 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111613 2w6d:A (9.0) BS10 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111614 2w6d:A (9.0) BS11 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111615 2w6d:A (9.0) BS12 GDP 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111616 2w6d:B (9.0) BS01 GDP 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111617 2w6d:B (9.0) BS02 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111618 2w6d:B (9.0) BS03 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111619 2w6d:B (9.0) BS04 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111620 2w6d:B (9.0) BS05 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111621 2w6d:B (9.0) BS06 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111622 2w6d:B (9.0) BS07 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111623 2w6d:B (9.0) BS08 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111624 2w6d:B (9.0) BS09 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111625 2w6d:B (9.0) BS10 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111626 2w6d:B (9.0) BS11 CPL 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111627 2w6d:B (9.0) BS12 GDP 3.6.5.5 GO:0003924 ... B2IZD3 20064379
    111628 2w6e:D (6.5) BS01 ADP 7.1.2.2 GO:0005515 ... P00829 19966409
    111629 2w6i:G (4.0) BS01 peptide 3.6.3.14 GO:0005515 ... P05631 19966409
    111630 2w6i:H (4.0) BS01 peptide 3.6.3.14 GO:0005198 ... P05630 19966409
    111631 2w6j:H (3.84) BS01 peptide 3.6.3.14 GO:0005198 ... P05630 19966409
    111632 2w6m:A (2.0) BS01 OA1 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=21.5uM
    BindingDB: IC50=21500nM
    111633 2w6m:B (2.0) BS01 OA1 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=21.5uM
    BindingDB: IC50=21500nM
    111634 2w6n:A (1.87) BS01 OA2 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.125uM
    BindingDB: IC50=125nM
    111635 2w6n:B (1.87) BS01 OA2 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.125uM
    BindingDB: IC50=125nM
    111636 2w6o:A (2.5) BS01 OA3 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=60.8uM
    BindingDB: IC50=60800nM
    111637 2w6o:C (2.5) BS01 OA3 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=60.8uM
    BindingDB: IC50=60800nM
    111638 2w6p:A (1.85) BS01 OA4 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.333uM
    BindingDB: IC50=333nM
    111639 2w6q:A (2.05) BS01 OA5 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=25.4uM
    BindingDB: IC50=25400nM
    111640 2w6q:B (2.05) BS01 OA5 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=25.4uM
    BindingDB: IC50=25400nM
    111641 2w6t:B (2.9) BS01 peptide ? GO:0002049 ... P48632 19504741
    111642 2w6t:B (2.9) BS02 PVE ? GO:0002049 ... P48632 19504741
    111643 2w6u:B (3.0) BS01 peptide ? GO:0002049 ... P48632 19504741
    111644 2w6u:B (3.0) BS02 PVE ? GO:0002049 ... P48632 19504741
    111645 2w6v:A (1.8) BS01 HEM ? GO:0004601 ... P69905 19365817
    111646 2w6v:A (1.8) BS02 XE ? GO:0004601 ... P69905 19365817
    111647 2w6v:A (1.8) BS03 XE ? GO:0004601 ... P69905 19365817
    111648 2w6v:A (1.8) BS04 XE ? GO:0004601 ... P69905 19365817
    111649 2w6v:B (1.8) BS01 HEM ? GO:0004601 ... P68871 19365817
    111650 2w6v:B (1.8) BS02 XE ? GO:0004601 ... P68871 19365817
    111651 2w6v:C (1.8) BS01 HEM ? GO:0004601 ... P69905 19365817
    111652 2w6v:C (1.8) BS02 XE ? GO:0004601 ... P69905 19365817
    111653 2w6v:C (1.8) BS03 XE ? GO:0004601 ... P69905 19365817
    111654 2w6v:C (1.8) BS04 XE ? GO:0004601 ... P69905 19365817
    111655 2w6v:D (1.8) BS01 HEM ? GO:0004601 ... P68871 19365817
    111656 2w6v:D (1.8) BS02 XE ? GO:0004601 ... P68871 19365817
    111657 2w6v:D (1.8) BS03 XE ? GO:0004601 ... P68871 19365817
    111658 2w6w:A (1.99) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 19365817
    111659 2w6w:A (1.99) BS02 XE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 19365817
    111660 2w6w:A (1.99) BS03 XE 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 19365817
    111661 2w6x:A (1.73) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    111662 2w6y:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    111663 2w6z:A (1.9) BS01 L21 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=1500uM
    BindingDB: IC50=1500000nM
    111664 2w70:A (1.77) BS01 L22 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=12uM
    BindingDB: IC50=12000nM
    111665 2w70:B (1.77) BS01 L22 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=12uM
    BindingDB: IC50=12000nM
    111666 2w71:A (1.99) BS01 L23 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.334uM
    BindingDB: IC50=334nM
    111667 2w71:C (1.99) BS01 L23 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.334uM
    BindingDB: IC50=334nM
    111668 2w72:A (1.07) BS01 HEM ? GO:0004601 ... P69905 19365817
    111669 2w72:A (1.07) BS02 XE ? GO:0004601 ... P69905 19365817
    111670 2w72:A (1.07) BS03 XE ? GO:0004601 ... P69905 19365817
    111671 2w72:A (1.07) BS04 XE ? GO:0004601 ... P69905 19365817
    111672 2w72:A (1.07) BS05 XE ? GO:0004601 ... P69905 19365817
    111673 2w72:A (1.07) BS06 XE ? GO:0004601 ... P69905 19365817
    111674 2w72:B (1.07) BS01 HEM ? GO:0004601 ... P68871 19365817
    111675 2w72:B (1.07) BS02 XE ? GO:0004601 ... P68871 19365817
    111676 2w72:B (1.07) BS03 XE ? GO:0004601 ... P68871 19365817
    111677 2w72:C (1.07) BS01 HEM ? GO:0004601 ... P69905 19365817
    111678 2w72:C (1.07) BS02 XE ? GO:0004601 ... P69905 19365817
    111679 2w72:C (1.07) BS03 XE ? GO:0004601 ... P69905 19365817
    111680 2w72:C (1.07) BS04 XE ? GO:0004601 ... P69905 19365817
    111681 2w72:D (1.07) BS01 HEM ? GO:0004601 ... P68871 19365817
    111682 2w72:D (1.07) BS02 XE ? GO:0004601 ... P68871 19365817
    111683 2w72:D (1.07) BS03 XE ? GO:0004601 ... P68871 19365817
    111684 2w73:A (1.45) BS01 peptide ? GO:0000922 ... P0DP23 19404396
    111685 2w73:A (1.45) BS02 peptide ? GO:0000922 ... P0DP23 19404396
    111686 2w73:A (1.45) BS03 CA ? GO:0000922 ... P0DP23 19404396
    111687 2w73:A (1.45) BS04 CA ? GO:0000922 ... P0DP23 19404396
    111688 2w73:A (1.45) BS05 CA ? GO:0000922 ... P0DP23 19404396
    111689 2w73:A (1.45) BS06 CA ? GO:0000922 ... P0DP23 19404396
    111690 2w73:B (1.45) BS01 peptide ? GO:0000922 ... P0DP23 19404396
    111691 2w73:B (1.45) BS02 peptide ? GO:0000922 ... P0DP23 19404396
    111692 2w73:B (1.45) BS03 CA ? GO:0000922 ... P0DP23 19404396
    111693 2w73:B (1.45) BS04 CA ? GO:0000922 ... P0DP23 19404396
    111694 2w73:B (1.45) BS05 CA ? GO:0000922 ... P0DP23 19404396
    111695 2w73:B (1.45) BS06 CA ? GO:0000922 ... P0DP23 19404396
    111696 2w73:E (1.45) BS01 peptide ? GO:0000922 ... P0DP23 19404396
    111697 2w73:E (1.45) BS02 peptide ? GO:0000922 ... P0DP23 19404396
    111698 2w73:E (1.45) BS03 CA ? GO:0000922 ... P0DP23 19404396
    111699 2w73:E (1.45) BS04 CA ? GO:0000922 ... P0DP23 19404396
    111700 2w73:E (1.45) BS05 CA ? GO:0000922 ... P0DP23 19404396
    111701 2w73:E (1.45) BS06 CA ? GO:0000922 ... P0DP23 19404396
    111702 2w73:F (1.45) BS01 peptide ? GO:0000922 ... P0DP23 19404396
    111703 2w73:F (1.45) BS02 peptide ? GO:0000922 ... P0DP23 19404396
    111704 2w73:F (1.45) BS03 CA ? GO:0000922 ... P0DP23 19404396
    111705 2w73:F (1.45) BS04 CA ? GO:0000922 ... P0DP23 19404396
    111706 2w73:F (1.45) BS05 CA ? GO:0000922 ... P0DP23 19404396
    111707 2w73:F (1.45) BS06 CA ? GO:0000922 ... P0DP23 19404396
    111708 2w73:F (1.45) BS07 CA ? GO:0000922 ... P0DP23 19404396
    111709 2w76:B (2.8) BS01 peptide ? GO:0002049 ... P48632 19504741
    111710 2w76:B (2.8) BS02 PVE ? GO:0002049 ... P48632 19504741
    111711 2w77:B (2.9) BS01 peptide ? GO:0002049 ... P48632 19504741
    111712 2w77:B (2.9) BS02 PVE ? GO:0002049 ... P48632 19504741
    111713 2w78:B (3.0) BS01 peptide ? GO:0002049 ... P48632 19504741
    111714 2w78:B (3.0) BS02 PVE ? GO:0002049 ... P48632 19504741
    111715 2w7d:A (1.8) BS01 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111716 2w7e:A (1.69) BS01 GLY 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111717 2w7e:A (1.69) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111718 2w7f:A (1.67) BS01 SER 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111719 2w7f:A (1.67) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111720 2w7g:A (1.92) BS01 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111721 2w7g:A (1.92) BS02 ALO 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111722 2w7h:A (1.67) BS01 GLY 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111723 2w7h:A (1.67) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111724 2w7i:A (2.72) BS01 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111725 2w7j:A (1.68) BS01 GLY 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111726 2w7j:A (1.68) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111727 2w7k:A (2.42) BS01 SER 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111728 2w7k:A (2.42) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111729 2w7l:A (2.41) BS01 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111730 2w7l:A (2.41) BS02 ALO 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111731 2w7m:A (1.86) BS01 GLY 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111732 2w7m:A (1.86) BS02 PLP 2.1.2.1 GO:0004372 ... Q7SIB6 18699779
    111733 2w7n:A (1.85) BS01 dna ? GO:0005515 ... P03052 19190096
    111734 2w7n:A (1.85) BS02 dna ? GO:0005515 ... P03052 19190096
    111735 2w7n:A (1.85) BS03 dna ? GO:0005515 ... P03052 19190096
    111736 2w7n:A (1.85) BS04 dna ? GO:0005515 ... P03052 19190096
    111737 2w7n:B (1.85) BS01 dna ? GO:0005515 ... P03052 19190096
    111738 2w7n:B (1.85) BS02 dna ? GO:0005515 ... P03052 19190096
    111739 2w7n:B (1.85) BS03 dna ? GO:0005515 ... P03052 19190096
    111740 2w7n:B (1.85) BS04 dna ? GO:0005515 ... P03052 19190096
    111741 2w7o:A (3.16) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111742 2w7o:A (3.16) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111743 2w7o:A (3.16) BS03 DGT 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111744 2w7o:A (3.16) BS04 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111745 2w7o:A (3.16) BS05 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111746 2w7o:B (3.16) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111747 2w7o:B (3.16) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111748 2w7o:B (3.16) BS03 DGT 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111749 2w7o:B (3.16) BS04 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111750 2w7o:B (3.16) BS05 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111751 2w7p:A (3.71) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111752 2w7p:A (3.71) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111753 2w7p:A (3.71) BS03 DTP 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111754 2w7p:A (3.71) BS04 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111755 2w7p:A (3.71) BS05 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111756 2w7p:B (3.71) BS01 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111757 2w7p:B (3.71) BS02 dna 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111758 2w7p:B (3.71) BS03 DTP 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111759 2w7p:B (3.71) BS04 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111760 2w7p:B (3.71) BS05 CA 2.7.7.7 GO:0003684 ... Q9UBT6 19542228
    111761 2w7w:A (1.7) BS01 FE 1.15.1.1 GO:0004784 ... B6ENP9 19193992
    111762 2w7w:B (1.7) BS01 FE 1.15.1.1 GO:0004784 ... B6ENP9 19193992
    111763 2w7x:A (2.07) BS01 D1A 2.7.11.1 GO:0004672 ... O96017 19741151 MOAD: ic50=24nM
    111764 2w7x:A (2.07) BS02 MG 2.7.11.1 GO:0004672 ... O96017 19741151
    111765 2w7y:A (2.35) BS01 GAL N/A N/A N/A 19285508
    111766 2w7y:A (2.35) BS02 FUC N/A N/A N/A 19285508
    111767 2w7y:B (2.35) BS01 GAL N/A N/A N/A 19285508
    111768 2w7y:B (2.35) BS02 FUC N/A N/A N/A 19285508
    111769 2w83:A (1.93) BS01 GTP 3.6.5.2 GO:0001726 ... P62330 19644450
    111770 2w83:A (1.93) BS02 MG 3.6.5.2 GO:0001726 ... P62330 19644450
    111771 2w83:B (1.93) BS01 GTP 3.6.5.2 GO:0001726 ... P62330 19644450
    111772 2w83:B (1.93) BS02 MG 3.6.5.2 GO:0001726 ... P62330 19644450
    111773 2w83:E (1.93) BS01 GTP 3.6.5.2 GO:0001726 ... P62330 19644450
    111774 2w83:E (1.93) BS02 MG 3.6.5.2 GO:0001726 ... P62330 19644450
    111775 2w84:A (-1.00) BS01 peptide ? GO:0005778 ... O75381 19197237
    111776 2w85:A (-1.00) BS01 peptide ? GO:0005778 ... O75381 19197237
    111777 2w86:A (1.8) BS01 CA ? GO:0005509 ... P35555 19446531
    111778 2w86:A (1.8) BS02 CA ? GO:0005509 ... P35555 19446531
    111779 2w87:A (1.6) BS01 CA 3.2.1.- GO:0030246 ... Q51815 19218457
    111780 2w87:A (1.6) BS02 CA 3.2.1.- GO:0030246 ... Q51815 19218457
    111781 2w87:A (1.6) BS03 GCU 3.2.1.- GO:0030246 ... Q51815 19218457
    111782 2w87:B (1.6) BS01 GCU 3.2.1.- GO:0030246 ... Q51815 19218457
    111783 2w87:B (1.6) BS02 CA 3.2.1.- GO:0030246 ... Q51815 19218457
    111784 2w87:B (1.6) BS03 CA 3.2.1.- GO:0030246 ... Q51815 19218457
    111785 2w88:A (2.89) BS01 CU ? GO:0005507 ... Q51883 19834935
    111786 2w88:A (2.89) BS02 ZN ? GO:0005507 ... Q51883 19834935
    111787 2w88:A (2.89) BS03 ZN ? GO:0005507 ... Q51883 19834935
    111788 2w88:B (2.89) BS01 ZN ? GO:0005507 ... Q51883 19834935
    111789 2w88:B (2.89) BS02 CU ? GO:0005507 ... Q51883 19834935
    111790 2w88:B (2.89) BS03 ZN ? GO:0005507 ... Q51883 19834935
    111791 2w88:C (2.89) BS01 CU ? GO:0005507 ... Q51883 19834935
    111792 2w88:C (2.89) BS02 ZN ? GO:0005507 ... Q51883 19834935
    111793 2w88:C (2.89) BS03 ZN ? GO:0005507 ... Q51883 19834935
    111794 2w8c:A (1.8) BS01 CU ? GO:0005507 ... Q51883 19834935
    111795 2w8c:A (1.8) BS02 ZN ? GO:0005507 ... Q51883 19834935
    111796 2w8c:A (1.8) BS03 ZN ? GO:0005507 ... Q51883 19834935
    111797 2w8c:B (1.8) BS01 CU ? GO:0005507 ... Q51883 19834935
    111798 2w8c:B (1.8) BS02 ZN ? GO:0005507 ... Q51883 19834935
    111799 2w8d:A (2.35) BS01 MG 2.7.8.- N/A O34952 19229300
    111800 2w8d:B (2.35) BS01 MG 2.7.8.- N/A O34952 19229300

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).