SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    114601 2wxu:A (1.8) BS05 CA 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114602 2wxv:A (2.6) BS01 WXV 2.7.11.22 GO:0000082 ... P24941 20141146
    114603 2wxv:C (2.6) BS01 WXV 2.7.11.22 GO:0000082 ... P24941 20141146
    114604 2wy2:D (-1.00) BS01 PO3 2.7.1.196 GO:0005515 ... P69795 19959833
    114605 2wy4:A (1.35) BS01 HEM ? GO:0008941 ... Q0P842 20164176
    114606 2wy6:A (3.2) BS01 ZN 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114607 2wy6:B (3.2) BS01 ZN 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114608 2wy6:B (3.2) BS02 CA 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114609 2wy6:B (3.2) BS03 CA 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114610 2wy6:C (3.2) BS01 ZN 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114611 2wy6:C (3.2) BS02 CA 3.1.4.3 GO:0001907 ... Q0TV31 20944240
    114612 2wya:A (1.7) BS01 HMG 2.3.3.10 GO:0001822 ... P54868 20346956
    114613 2wya:B (1.7) BS01 HMG 2.3.3.10 GO:0001822 ... P54868 20346956
    114614 2wya:C (1.7) BS01 HMG 2.3.3.10 GO:0001822 ... P54868 20346956
    114615 2wya:D (1.7) BS01 HMG 2.3.3.10 GO:0001822 ... P54868 20346956
    114616 2wyc:A (1.9) BS01 3LA 3.5.1.97 GO:0016787 ... Q9I194 20080736
    114617 2wyc:B (1.9) BS01 3LA 3.5.1.97 GO:0016787 ... Q9I194 20080736
    114618 2wyf:A (2.4) BS01 MBG ? GO:0005737 ... Q05097 20410292 BindingDB: Kd=70000nM
    114619 2wyf:A (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    114620 2wyf:A (2.4) BS03 CA ? GO:0005737 ... Q05097 20410292
    114621 2wyf:B (2.4) BS01 CA ? GO:0005737 ... Q05097 20410292
    114622 2wyf:B (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    114623 2wyf:C (2.4) BS01 MBG ? GO:0005737 ... Q05097 20410292 BindingDB: Kd=70000nM
    114624 2wyf:C (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    114625 2wyf:C (2.4) BS03 CA ? GO:0005737 ... Q05097 20410292
    114626 2wyf:D (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    114627 2wyf:D (2.4) BS02 CA ? GO:0005737 ... Q05097 20410292
    114628 2wyf:E (2.4) BS01 CA ? GO:0005737 ... Q05097 20410292
    114629 2wyf:E (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    114630 2wyf:F (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    114631 2wyf:F (2.4) BS02 CA ? GO:0005737 ... Q05097 20410292
    114632 2wyf:G (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    114633 2wyf:G (2.4) BS02 CA ? GO:0005737 ... Q05097 20410292
    114634 2wyf:H (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    114635 2wyf:H (2.4) BS02 CA ? GO:0005737 ... Q05097 20410292
    114636 2wyg:A (1.88) BS01 461 3.4.21.6 GO:0004252 ... P00742 20006499 MOAD: Ki=2nM
    BindingDB: Ki=2nM
    114637 2wyh:A (1.9) BS01 ZN 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114638 2wyh:B (1.9) BS01 ZN 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114639 2wyi:A (2.6) BS01 ZN 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114640 2wyi:A (2.6) BS02 SWA 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114641 2wyi:B (2.6) BS01 ZN 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114642 2wyi:B (2.6) BS02 SWA 3.2.1.24 GO:0004559 ... Q99YP5 20140249
    114643 2wyj:A (2.38) BS01 898 3.4.21.6 GO:0004252 ... P00742 20006499 MOAD: Ki=1nM
    BindingDB: Ki=0.8nM
    114644 2wyk:A (1.5) BS01 NGE ? GO:0030288 ... P44542 31518131
    114645 2wym:A (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114646 2wym:B (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114647 2wym:C (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114648 2wym:D (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114649 2wym:E (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114650 2wym:F (2.6) BS01 MN 3.1.1.- GO:0005737 ... P39300 20359483
    114651 2wyn:A (2.1) BS01 LG9 3.2.1.28 GO:0004555 ... P13482 20461849
    114652 2wyn:A (2.1) BS02 GLC 3.2.1.28 GO:0004555 ... P13482 20461849
    114653 2wyn:B (2.1) BS01 LG9 3.2.1.28 GO:0004555 ... P13482 20461849
    114654 2wyn:B (2.1) BS02 GLC 3.2.1.28 GO:0004555 ... P13482 20461849
    114655 2wyn:C (2.1) BS01 LG9 3.2.1.28 GO:0004555 ... P13482 20461849
    114656 2wyn:C (2.1) BS02 GLC 3.2.1.28 GO:0004555 ... P13482 20461849
    114657 2wyn:D (2.1) BS01 LG9 3.2.1.28 GO:0004555 ... P13482 20461849
    114658 2wyn:D (2.1) BS02 GLC 3.2.1.28 GO:0004555 ... P13482 20461849
    114659 2wyo:A (3.15) BS01 GSH 6.3.2.3 GO:0000287 ... Q57UN0 20045436
    114660 2wyo:B (3.15) BS01 GSH 6.3.2.3 GO:0000287 ... Q57UN0 20045436
    114661 2wyo:C (3.15) BS01 GSH 6.3.2.3 GO:0000287 ... Q57UN0 20045436
    114662 2wyo:D (3.15) BS01 GSH 6.3.2.3 GO:0000287 ... Q57UN0 20045436
    114663 2wyp:A (1.5) BS01 KDN ? GO:0030288 ... P44542 31518131
    114664 2wyr:A (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114665 2wyr:A (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114666 2wyr:B (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114667 2wyr:B (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114668 2wyr:C (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114669 2wyr:C (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114670 2wyr:D (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114671 2wyr:D (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114672 2wyr:E (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114673 2wyr:E (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114674 2wyr:F (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114675 2wyr:F (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114676 2wyr:G (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114677 2wyr:G (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114678 2wyr:H (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114679 2wyr:H (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114680 2wyr:I (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114681 2wyr:I (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114682 2wyr:J (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114683 2wyr:J (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114684 2wyr:K (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114685 2wyr:K (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114686 2wyr:L (2.245) BS01 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114687 2wyr:L (2.245) BS02 CO 3.4.11.- GO:0004177 ... O58255 N/A
    114688 2wys:A (2.75) BS01 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114689 2wys:A (2.75) BS02 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114690 2wys:A (2.75) BS03 CA 3.2.1.8 GO:0004553 ... P51584 20682344
    114691 2wys:A (2.75) BS04 CA 3.2.1.8 GO:0004553 ... P51584 20682344
    114692 2wys:B (2.75) BS01 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114693 2wys:B (2.75) BS02 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114694 2wys:B (2.75) BS03 CA 3.2.1.8 GO:0004553 ... P51584 20682344
    114695 2wyt:A (1.0) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114696 2wyt:A (1.0) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114697 2wyt:A (1.0) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114698 2wyt:F (1.0) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114699 2wyt:F (1.0) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114700 2wyt:F (1.0) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114701 2wyv:B (1.86) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114702 2wyv:D (1.86) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114703 2wyw:A (1.9) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114704 2wyw:A (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114705 2wyw:B (1.9) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114706 2wyw:B (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114707 2wyw:C (1.9) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114708 2wyw:C (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114709 2wyw:D (1.9) BS01 NAD 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114710 2wyw:D (1.9) BS02 TCL 1.3.1.9 GO:0004318 ... Q5SLI9 23027736
    114711 2wyy:A (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114712 2wyy:C (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114713 2wyy:D (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114714 2wyy:F (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114715 2wyy:H (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114716 2wyy:I (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114717 2wyy:J (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114718 2wyy:K (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114719 2wyy:L (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114720 2wyy:M (10.6) BS01 rna ? GO:0003723 ... P03521 20133572
    114721 2wyz:A (1.7) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114722 2wyz:A (1.7) BS02 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114723 2wyz:A (1.7) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114724 2wyz:A (1.7) BS04 U5P 1.15.1.1 GO:0000303 ... P00441 20067275
    114725 2wyz:F (1.7) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114726 2wyz:F (1.7) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114727 2wyz:F (1.7) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114728 2wz0:A (1.72) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114729 2wz0:A (1.72) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114730 2wz0:A (1.72) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114731 2wz0:A (1.72) BS04 ZZT 1.15.1.1 GO:0000303 ... P00441 20067275
    114732 2wz0:F (1.72) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114733 2wz0:F (1.72) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114734 2wz0:F (1.72) BS03 DSN 1.15.1.1 GO:0000303 ... P00441 20067275
    114735 2wz0:F (1.72) BS04 ZZT 1.15.1.1 GO:0000303 ... P00441 20067275
    114736 2wz5:A (1.5) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114737 2wz5:A (1.5) BS02 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114738 2wz5:A (1.5) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114739 2wz5:A (1.5) BS04 MET 1.15.1.1 GO:0000303 ... P00441 20067275
    114740 2wz5:F (1.5) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114741 2wz5:F (1.5) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114742 2wz5:F (1.5) BS03 MET 1.15.1.1 GO:0000303 ... P00441 20067275
    114743 2wz6:A (1.55) BS01 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114744 2wz6:A (1.55) BS02 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114745 2wz6:A (1.55) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114746 2wz6:A (1.55) BS04 ZO0 1.15.1.1 GO:0000303 ... P00441 20067275
    114747 2wz6:F (1.55) BS01 CU 1.15.1.1 GO:0000303 ... P00441 20067275
    114748 2wz6:F (1.55) BS02 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114749 2wz6:F (1.55) BS03 ZN 1.15.1.1 GO:0000303 ... P00441 20067275
    114750 2wz6:F (1.55) BS04 ZO0 1.15.1.1 GO:0000303 ... P00441 20067275
    114751 2wz8:A (1.5) BS01 CA N/A GO:0030246 ... N/A 20496884
    114752 2wza:A (2.082) BS01 CA ? N/A P16952 20138058
    114753 2wza:A (2.082) BS02 CA ? N/A P16952 20138058
    114754 2wza:A (2.082) BS03 CA ? N/A P16952 20138058
    114755 2wzb:A (1.47) BS01 ADP 2.7.2.3 GO:0004618 ... P00558 20397725
    114756 2wzb:A (1.47) BS02 MGF 2.7.2.3 GO:0004618 ... P00558 20397725
    114757 2wzc:A (1.5) BS01 ALF 2.7.2.3 GO:0004618 ... P00558 20397725
    114758 2wzc:A (1.5) BS02 ADP 2.7.2.3 GO:0004618 ... P00558 20397725
    114759 2wzd:A (1.56) BS01 AF3 2.7.2.3 GO:0004618 ... P00558 20397725
    114760 2wzd:A (1.56) BS02 ADP 2.7.2.3 GO:0004618 ... P00558 20397725
    114761 2wze:A (2.5) BS01 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114762 2wze:A (2.5) BS02 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114763 2wze:A (2.5) BS03 CA 3.2.1.8 GO:0004553 ... P51584 20682344
    114764 2wze:B (2.5) BS01 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114765 2wze:B (2.5) BS02 XYP 3.2.1.8 GO:0004553 ... P51584 20682344
    114766 2wze:B (2.5) BS03 CA 3.2.1.8 GO:0004553 ... P51584 20682344
    114767 2wzf:A (2.1) BS01 UDP ? N/A Q5ZVS2 20030628
    114768 2wzf:A (2.1) BS02 BGC ? N/A Q5ZVS2 20030628
    114769 2wzg:A (1.9) BS01 UPG ? N/A Q5WWY0 20030628 MOAD: Kd=100nM
    114770 2wzh:A (2.2) BS01 NGO 3.2.1.169 N/A Q89ZI2 20067256
    114771 2wzh:A (2.2) BS02 CA 3.2.1.169 N/A Q89ZI2 20067256
    114772 2wzi:A (1.9) BS01 CA 3.2.1.169 N/A Q89ZI2 20067256
    114773 2wzi:A (1.9) BS02 5FN 3.2.1.169 N/A Q89ZI2 20067256
    114774 2wzi:B (1.9) BS01 CA 3.2.1.169 N/A Q89ZI2 20067256
    114775 2wzi:B (1.9) BS02 5FN 3.2.1.169 N/A Q89ZI2 20067256
    114776 2wzm:A (1.64) BS01 NA7 1.1.1.- GO:0016491 ... A0QV09 20188740
    114777 2wzm:B (1.64) BS01 NA7 1.1.1.- GO:0016491 ... A0QV09 20188740
    114778 2wzn:A (1.9) BS01 ZN ? GO:0004177 ... O59485 19291145
    114779 2wzn:A (1.9) BS02 ZN ? GO:0004177 ... O59485 19291145
    114780 2wzq:A (2.8) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... Q2YHF0 20375022
    114781 2wzs:A (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114782 2wzs:A (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114783 2wzs:B (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114784 2wzs:B (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114785 2wzs:C (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114786 2wzs:C (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114787 2wzs:D (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114788 2wzs:D (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114789 2wzs:E (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114790 2wzs:E (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114791 2wzs:F (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114792 2wzs:F (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114793 2wzs:G (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114794 2wzs:G (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114795 2wzs:H (2.25) BS01 CA ? GO:0000224 ... Q8A0N1 20081828
    114796 2wzs:H (2.25) BS02 MVL ? GO:0000224 ... Q8A0N1 20081828 MOAD: Ki=140uM
    114797 2wzv:A (1.75) BS01 FMN 1.-.-.- GO:0010181 ... A0R6D0 20624223
    114798 2wzv:A (1.75) BS02 FMN 1.-.-.- GO:0010181 ... A0R6D0 20624223
    114799 2wzv:B (1.75) BS01 FMN 1.-.-.- GO:0010181 ... A0R6D0 20624223
    114800 2wzv:B (1.75) BS02 FMN 1.-.-.- GO:0010181 ... A0R6D0 20624223

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).