SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    117801 2xyt:C (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359
    117802 2xyt:D (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117803 2xyt:E (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359
    117804 2xyt:F (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117805 2xyt:G (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117806 2xyt:G (2.05) BS02 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117807 2xyt:H (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117808 2xyt:H (2.05) BS02 TC9 ? GO:0004888 ... Q8WSF8 21468359 MOAD: Ki=509.2nM
    117809 2xyt:I (2.05) BS01 TC9 ? GO:0004888 ... Q8WSF8 21468359
    117810 2xyu:A (2.117) BS01 Q9G 2.7.10.1 GO:0004672 ... Q03137 22137457 MOAD: ic50=4.5uM
    117811 2xyv:A (2.06) BS01 SAH 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0004483 ... P0C6X7 21637813
    117812 2xyv:B (2.06) BS01 ZN 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0C6X7 21637813
    117813 2xyv:B (2.06) BS02 ZN 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0003723 ... P0C6X7 21637813
    117814 2xyw:A (3.14) BS01 08S ? GO:0003677 ... Q03181 21400663
    117815 2xyw:B (3.14) BS01 08S ? GO:0003677 ... Q03181 21400663
    117816 2xyx:A (2.7) BS01 Z00 ? GO:0003677 ... Q03181 21400663
    117817 2xyx:B (2.7) BS01 Z00 ? GO:0003677 ... Q03181 21400663
    117818 2xz0:A (3.0) BS01 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117819 2xz0:A (3.0) BS02 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117820 2xz0:B (3.0) BS01 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117821 2xz0:B (3.0) BS02 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117822 2xz0:C (3.0) BS01 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117823 2xz0:C (3.0) BS02 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117824 2xz1:A (3.35) BS01 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117825 2xz1:A (3.35) BS02 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117826 2xz1:B (3.35) BS01 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117827 2xz1:B (3.35) BS02 FE 1.14.19.2 GO:0005515 ... P22337 21930947
    117828 2xz1:B (3.35) BS03 CA 1.14.19.2 GO:0005515 ... P22337 21930947
    117829 2xz3:A (1.95) BS01 GLC ? GO:0008643 ... P51519 21304939
    117830 2xz3:A (1.95) BS02 GLC ? GO:0008643 ... P51519 21304939
    117831 2xz4:A (1.72) BS01 CU ? GO:0008270 ... Q8SXQ7 21372849
    117832 2xz5:A (2.8) BS01 ACH ? GO:0004888 ... Q8WSF8 21115477
    117833 2xz5:A (2.8) BS02 ACH ? GO:0004888 ... Q8WSF8 21115477
    117834 2xz5:A (2.8) BS03 PO4 ? GO:0004888 ... Q8WSF8 21115477
    117835 2xz5:A (2.8) BS04 ACH ? GO:0004888 ... Q8WSF8 21115477
    117836 2xz5:B (2.8) BS01 ACH ? GO:0004888 ... Q8WSF8 21115477
    117837 2xz5:B (2.8) BS02 ACH ? GO:0004888 ... Q8WSF8 21115477
    117838 2xz5:B (2.8) BS03 PO4 ? GO:0004888 ... Q8WSF8 21115477
    117839 2xz5:C (2.8) BS01 ACH ? GO:0004888 ... Q8WSF8 21115477
    117840 2xz5:C (2.8) BS02 ACH ? GO:0004888 ... Q8WSF8 21115477
    117841 2xz5:C (2.8) BS03 PO4 ? GO:0004888 ... Q8WSF8 21115477
    117842 2xz5:C (2.8) BS04 ACH ? GO:0004888 ... Q8WSF8 21115477
    117843 2xz5:D (2.8) BS01 ACH ? GO:0004888 ... Q8WSF8 21115477
    117844 2xz5:E (2.8) BS01 ACH ? GO:0004888 ... Q8WSF8 21115477
    117845 2xz5:E (2.8) BS02 ACH ? GO:0004888 ... Q8WSF8 21115477
    117846 2xz5:E (2.8) BS03 ACH ? GO:0004888 ... Q8WSF8 21115477
    117847 2xz5:E (2.8) BS04 PO4 ? GO:0004888 ... Q8WSF8 21115477
    117848 2xz6:D (3.137) BS01 ETM ? GO:0004888 ... Q8WSF8 21115477
    117849 2xz7:A (1.83) BS01 PEP 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117850 2xz7:A (1.83) BS02 MG 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117851 2xz9:A (1.677) BS01 MG 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117852 2xz9:A (1.677) BS02 PYR 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117853 2xz9:B (1.677) BS01 MG 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117854 2xz9:B (1.677) BS02 PYR 2.7.3.9 GO:0016310 ... Q8R7R4 21250658
    117855 2xzc:L (1.36) BS01 XOP N/A N/A N/A 21896761
    117856 2xze:A (1.75) BS01 peptide 3.4.19.- N/A O95630 21827950
    117857 2xze:A (1.75) BS02 peptide 3.4.19.- N/A O95630 21827950
    117858 2xze:B (1.75) BS01 peptide 3.4.19.- N/A O95630 21827950
    117859 2xzf:A (1.799) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117860 2xzf:A (1.799) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117861 2xzf:A (1.799) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117862 2xzg:A (1.7) BS01 VH1 ? GO:0005198 ... Q00610 21816279 BindingDB: IC50=18000nM
    117863 2xzi:A (1.45) BS01 KDM 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117864 2xzi:A (1.45) BS02 KDM 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117865 2xzi:B (1.45) BS01 KDM 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117866 2xzi:B (1.45) BS02 KDM 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117867 2xzj:A (1.84) BS01 KFN 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117868 2xzj:B (1.84) BS01 KFN 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117869 2xzk:A (1.5) BS01 FKD 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117870 2xzk:A (1.5) BS02 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117871 2xzk:A (1.5) BS03 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117872 2xzk:A (1.5) BS04 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117873 2xzk:B (1.5) BS01 FKD 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117874 2xzk:B (1.5) BS02 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117875 2xzk:B (1.5) BS03 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117876 2xzk:B (1.5) BS04 K99 3.2.1.18 GO:0004308 ... Q4WQS0 21247893
    117877 2xzl:A (2.4) BS01 rna 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117878 2xzl:A (2.4) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117879 2xzl:A (2.4) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117880 2xzl:A (2.4) BS04 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117881 2xzl:A (2.4) BS05 ADP 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117882 2xzl:A (2.4) BS06 ALF 3.6.4.12
    3.6.4.13
    GO:0000184 ... P30771 21419344
    117883 2xzo:A (2.395) BS01 rna 3.6.4.12
    3.6.4.13
    GO:0003677 ... Q92900 21419344
    117884 2xzo:A (2.395) BS02 ADP 3.6.4.12
    3.6.4.13
    GO:0003677 ... Q92900 21419344
    117885 2xzo:A (2.395) BS03 ALF 3.6.4.12
    3.6.4.13
    GO:0003677 ... Q92900 21419344
    117886 2xzo:A (2.395) BS04 MG 3.6.4.12
    3.6.4.13
    GO:0003677 ... Q92900 21419344
    117887 2xzq:H (2.4) BS01 peptide N/A N/A N/A 22266283
    117888 2xzq:L (2.4) BS01 peptide N/A N/A N/A 22266283
    117889 2xzs:A (2.0) BS01 MG 2.7.11.1 GO:0004672 ... P53355 27133022
    117890 2xzs:B (2.0) BS01 MG 2.7.11.1 GO:0004672 ... P53355 27133022
    117891 2xzu:A (1.82) BS01 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117892 2xzu:A (1.82) BS02 dna 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117893 2xzu:A (1.82) BS03 ZN 3.2.2.23
    4.2.99.18
    GO:0003676 ... P42371 21486746
    117894 2xzv:A (1.6) BS01 CA 3.1.3.16 GO:0004722 ... Q8DGS1 21310952
    117895 2xzv:A (1.6) BS02 MG 3.1.3.16 GO:0004722 ... Q8DGS1 21310952
    117896 2xzw:A (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117897 2xzw:A (1.95) BS02 AKG ? GO:0005515 ... P0A3F4 21041661
    117898 2xzw:A (1.95) BS03 ATP ? GO:0005515 ... P0A3F4 21041661
    117899 2xzw:B (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117900 2xzw:B (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117901 2xzw:B (1.95) BS03 AKG ? GO:0005515 ... P0A3F4 21041661
    117902 2xzw:C (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117903 2xzw:C (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117904 2xzw:C (1.95) BS03 AKG ? GO:0005515 ... P0A3F4 21041661
    117905 2xzw:D (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117906 2xzw:D (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117907 2xzw:E (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117908 2xzw:E (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117909 2xzw:F (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117910 2xzw:F (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117911 2xzw:F (1.95) BS03 AKG ? GO:0005515 ... P0A3F4 21041661
    117912 2xzw:G (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117913 2xzw:G (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117914 2xzw:H (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117915 2xzw:H (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117916 2xzw:H (1.95) BS03 AKG ? GO:0005515 ... P0A3F4 21041661
    117917 2xzw:I (1.95) BS01 ATP ? GO:0005515 ... P0A3F4 21041661
    117918 2xzw:I (1.95) BS02 ATP ? GO:0005515 ... P0A3F4 21041661
    117919 2xzw:I (1.95) BS03 AKG ? GO:0005515 ... P0A3F4 21041661
    117920 2y00:A (2.5) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117921 2y00:A (2.5) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117922 2y00:A (2.5) BS03 2CV ? GO:0004930 ... P07700 21228877
    117923 2y00:A (2.5) BS04 2CV ? GO:0004930 ... P07700 21228877
    117924 2y00:A (2.5) BS05 2CV ? GO:0004930 ... P07700 21228877
    117925 2y00:A (2.5) BS06 Y00 ? GO:0004930 ... P07700 21228877
    117926 2y00:A (2.5) BS07 Y01 ? GO:0004930 ... P07700 21228877
    117927 2y00:B (2.5) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117928 2y00:B (2.5) BS02 2CV ? GO:0004930 ... P07700 21228877
    117929 2y00:B (2.5) BS03 Y01 ? GO:0004930 ... P07700 21228877
    117930 2y00:B (2.5) BS04 Y01 ? GO:0004930 ... P07700 21228877
    117931 2y00:B (2.5) BS05 2CV ? GO:0004930 ... P07700 21228877
    117932 2y00:B (2.5) BS06 2CV ? GO:0004930 ... P07700 21228877
    117933 2y00:B (2.5) BS07 Y00 ? GO:0004930 ... P07700 21228877
    117934 2y01:A (2.6) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117935 2y01:A (2.6) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117936 2y01:A (2.6) BS03 2CV ? GO:0004930 ... P07700 21228877
    117937 2y01:A (2.6) BS04 2CV ? GO:0004930 ... P07700 21228877
    117938 2y01:A (2.6) BS05 2CV ? GO:0004930 ... P07700 21228877
    117939 2y01:A (2.6) BS06 Y00 ? GO:0004930 ... P07700 21228877
    117940 2y01:A (2.6) BS07 Y01 ? GO:0004930 ... P07700 21228877
    117941 2y01:B (2.6) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117942 2y01:B (2.6) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117943 2y01:B (2.6) BS03 2CV ? GO:0004930 ... P07700 21228877
    117944 2y01:B (2.6) BS04 2CV ? GO:0004930 ... P07700 21228877
    117945 2y01:B (2.6) BS05 2CV ? GO:0004930 ... P07700 21228877
    117946 2y01:B (2.6) BS06 Y00 ? GO:0004930 ... P07700 21228877
    117947 2y02:A (2.6) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117948 2y02:A (2.6) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117949 2y02:A (2.6) BS03 2CV ? GO:0004930 ... P07700 21228877
    117950 2y02:A (2.6) BS04 2CV ? GO:0004930 ... P07700 21228877
    117951 2y02:A (2.6) BS05 2CV ? GO:0004930 ... P07700 21228877
    117952 2y02:A (2.6) BS06 WHJ ? GO:0004930 ... P07700 21228877
    117953 2y02:A (2.6) BS07 Y01 ? GO:0004930 ... P07700 21228877
    117954 2y02:A (2.6) BS08 2CV ? GO:0004930 ... P07700 21228877
    117955 2y02:B (2.6) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117956 2y02:B (2.6) BS02 2CV ? GO:0004930 ... P07700 21228877
    117957 2y02:B (2.6) BS03 Y01 ? GO:0004930 ... P07700 21228877
    117958 2y02:B (2.6) BS04 Y01 ? GO:0004930 ... P07700 21228877
    117959 2y02:B (2.6) BS05 2CV ? GO:0004930 ... P07700 21228877
    117960 2y02:B (2.6) BS06 2CV ? GO:0004930 ... P07700 21228877
    117961 2y02:B (2.6) BS07 WHJ ? GO:0004930 ... P07700 21228877
    117962 2y03:A (2.85) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117963 2y03:A (2.85) BS02 2CV ? GO:0004930 ... P07700 21228877
    117964 2y03:A (2.85) BS03 2CV ? GO:0004930 ... P07700 21228877
    117965 2y03:A (2.85) BS04 5FW ? GO:0004930 ... P07700 21228877
    117966 2y03:A (2.85) BS05 Y01 ? GO:0004930 ... P07700 21228877
    117967 2y03:A (2.85) BS06 2CV ? GO:0004930 ... P07700 21228877
    117968 2y03:B (2.85) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117969 2y03:B (2.85) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117970 2y03:B (2.85) BS03 2CV ? GO:0004930 ... P07700 21228877
    117971 2y03:B (2.85) BS04 2CV ? GO:0004930 ... P07700 21228877
    117972 2y03:B (2.85) BS05 5FW ? GO:0004930 ... P07700 21228877
    117973 2y04:A (3.05) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117974 2y04:A (3.05) BS02 Y01 ? GO:0004930 ... P07700 21228877
    117975 2y04:A (3.05) BS03 2CV ? GO:0004930 ... P07700 21228877
    117976 2y04:A (3.05) BS04 2CV ? GO:0004930 ... P07700 21228877
    117977 2y04:A (3.05) BS05 68H ? GO:0004930 ... P07700 21228877
    117978 2y04:A (3.05) BS06 Y01 ? GO:0004930 ... P07700 21228877
    117979 2y04:B (3.05) BS01 Y01 ? GO:0004930 ... P07700 21228877
    117980 2y04:B (3.05) BS02 2CV ? GO:0004930 ... P07700 21228877
    117981 2y04:B (3.05) BS03 Y01 ? GO:0004930 ... P07700 21228877
    117982 2y04:B (3.05) BS04 Y01 ? GO:0004930 ... P07700 21228877
    117983 2y04:B (3.05) BS05 2CV ? GO:0004930 ... P07700 21228877
    117984 2y04:B (3.05) BS06 68H ? GO:0004930 ... P07700 21228877
    117985 2y05:A (2.2) BS01 NAP 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117986 2y05:A (2.2) BS02 RAL 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117987 2y05:A (2.2) BS03 RAL 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117988 2y05:B (2.2) BS01 RAL 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117989 2y05:B (2.2) BS02 NAP 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117990 2y05:C (2.2) BS01 NAP 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117991 2y05:D (2.2) BS01 NAP 1.3.1.48
    1.3.1.74
    GO:0005515 ... Q14914 N/A
    117992 2y06:H (2.5) BS01 peptide N/A N/A N/A 22266283
    117993 2y06:L (2.5) BS01 peptide N/A N/A N/A 22266283
    117994 2y07:H (2.4) BS01 peptide N/A N/A N/A 22266283
    117995 2y07:L (2.4) BS01 peptide N/A N/A N/A 22266283
    117996 2y08:A (1.7) BS01 FAD ? GO:0016491 ... D3Y1I2 21778983
    117997 2y08:B (1.7) BS01 FAD ? GO:0016491 ... D3Y1I2 21778983
    117998 2y09:A (1.7) BS01 CA 3.1.3.16 GO:0004722 ... Q8DGS1 21310952
    117999 2y09:A (1.7) BS02 CA 3.1.3.16 GO:0004722 ... Q8DGS1 21310952
    118000 2y09:A (1.7) BS03 MG 3.1.3.16 GO:0004722 ... Q8DGS1 21310952

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).