SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    119601 2yjd:A (1.93) BS02 YJD ? GO:0003677 ... Q92731 21612236
    119602 2yjd:B (1.93) BS01 peptide ? GO:0003677 ... Q92731 21612236
    119603 2yjd:B (1.93) BS02 YJD ? GO:0003677 ... Q92731 21612236
    119604 2yje:A (3.1) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    119605 2yje:A (3.1) BS02 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119606 2yje:B (3.1) BS01 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119607 2yje:B (3.1) BS02 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    119608 2yje:C (3.1) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    119609 2yje:C (3.1) BS02 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119610 2yjf:A (3.5) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    119611 2yjf:A (3.5) BS02 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119612 2yjf:B (3.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119613 2yjf:C (3.5) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    119614 2yjf:C (3.5) BS02 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119615 2yjf:D (3.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119616 2yjf:E (3.5) BS01 ATP 3.6.4.- GO:0000287 ... P68135 21673315
    119617 2yjg:A (1.8) BS01 MG 5.1.2.1 GO:0050043 ... D9TQ02 24710389
    119618 2yjg:B (1.8) BS01 MG 5.1.2.1 GO:0050043 ... D9TQ02 24710389
    119619 2yjj:A (2.05) BS01 FE ? GO:0008199 ... Q1X6M4 21768097
    119620 2yjj:A (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119621 2yjj:B (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119622 2yjj:C (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119623 2yjj:C (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119624 2yjj:D (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119625 2yjj:D (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119626 2yjj:E (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119627 2yjj:E (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119628 2yjj:F (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119629 2yjj:F (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119630 2yjj:G (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119631 2yjj:H (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119632 2yjj:H (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119633 2yjj:I (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119634 2yjj:I (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119635 2yjj:J (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119636 2yjj:J (2.05) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119637 2yjj:K (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119638 2yjj:L (2.05) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119639 2yjj:L (2.05) BS02 FE ? GO:0008199 ... Q1X6M4 21768097
    119640 2yjk:A (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119641 2yjk:A (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119642 2yjk:B (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119643 2yjk:B (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119644 2yjk:C (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119645 2yjk:C (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119646 2yjk:D (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119647 2yjk:D (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119648 2yjk:E (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119649 2yjk:F (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119650 2yjk:F (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119651 2yjk:G (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119652 2yjk:H (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119653 2yjk:H (2.0) BS02 FE ? GO:0008199 ... Q1X6M4 21768097
    119654 2yjk:I (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119655 2yjk:I (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119656 2yjk:J (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119657 2yjk:J (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119658 2yjk:K (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119659 2yjk:K (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119660 2yjk:L (2.0) BS01 OFE ? GO:0008199 ... Q1X6M4 21768097
    119661 2yjk:L (2.0) BS02 OFE ? GO:0008199 ... Q1X6M4 21768097
    119662 2yjp:A (2.26) BS01 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    119663 2yjp:A (2.26) BS02 ZN ? N/A Q5F5B5 22138345
    119664 2yjp:A (2.26) BS03 ZN ? N/A Q5F5B5 22138345
    119665 2yjp:B (2.26) BS01 ZN ? N/A Q5F5B5 22138345
    119666 2yjp:B (2.26) BS02 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    119667 2yjp:C (2.26) BS01 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    119668 2yjp:C (2.26) BS02 ZN ? N/A Q5F5B5 22138345
    119669 2yjp:C (2.26) BS03 ZN ? N/A Q5F5B5 22138345
    119670 2yjq:A (2.25) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119671 2yjq:A (2.25) BS02 BGC 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119672 2yjq:A (2.25) BS03 OXZ 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119673 2yjq:A (2.25) BS04 CA 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119674 2yjq:B (2.25) BS01 BGC 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119675 2yjq:B (2.25) BS02 OXZ 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119676 2yjq:B (2.25) BS03 CA 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119677 2yjv:C (2.8) BS01 peptide ? GO:0005515 ... P0A8R0 24045937
    119678 2yjv:C (2.8) BS02 peptide ? GO:0005515 ... P0A8R0 24045937
    119679 2yjw:A (1.61) BS01 YJW 3.6.4.10 GO:0005524 ... P07900 21972823
    119680 2yjx:A (1.83) BS01 YJX 3.6.4.10 GO:0005524 ... P07900 21972823
    119681 2yjy:A (2.598) BS01 rna ? GO:0003723 ... Q14671 21653694
    119682 2yjy:B (2.598) BS01 rna ? GO:0003723 ... Q14671 21653694
    119683 2yjz:A (2.2) BS01 NAP 1.16.1.- N/A Q4V8K1 23733181
    119684 2yjz:B (2.2) BS01 NAP 1.16.1.- N/A Q4V8K1 23733181
    119685 2yjz:C (2.2) BS01 NAP 1.16.1.- N/A Q4V8K1 23733181
    119686 2yjz:D (2.2) BS01 NAP 1.16.1.- N/A Q4V8K1 23733181
    119687 2yk0:A (2.8) BS01 MG ? GO:0016020 ... B7T1P0 22807674
    119688 2yk0:A (2.8) BS02 MG ? GO:0016020 ... B7T1P0 22807674
    119689 2yk1:H (1.85) BS01 NCT N/A N/A N/A 22079050 MOAD: Kd=7.4nM
    119690 2yk1:L (1.85) BS01 NCT N/A N/A N/A 22079050
    119691 2yk2:A (1.74) BS01 YJW 3.6.4.10 GO:0005524 ... P07900 21972823
    119692 2yk2:A (1.74) BS02 YJX 3.6.4.10 GO:0005524 ... P07900 21972823
    119693 2yk3:A (1.55) BS01 HEC ? GO:0005758 ... P00078 19459937
    119694 2yk3:B (1.55) BS01 HEC ? GO:0005758 ... P00078 19459937
    119695 2yk3:C (1.55) BS01 HEC ? GO:0005758 ... P00078 19459937
    119696 2yk4:A (1.94) BS01 EGC 2.4.3.6 N/A P72097 21880735
    119697 2yk4:A (1.94) BS02 EDO 2.4.3.6 N/A P72097 21880735
    119698 2yk5:A (2.32) BS01 C 2.4.3.6 N/A P72097 21880735
    119699 2yk5:A (2.32) BS02 EDO 2.4.3.6 N/A P72097 21880735
    119700 2yk5:A (2.32) BS03 EDO 2.4.3.6 N/A P72097 21880735
    119701 2yk6:A (2.83) BS01 CDP 2.4.3.6 N/A P72097 21880735
    119702 2yk7:A (2.18) BS01 CSF 2.4.3.6 N/A P72097 21880735
    119703 2yk7:A (2.18) BS02 EDO 2.4.3.6 N/A P72097 21880735
    119704 2yk9:A (1.32) BS01 YK9 3.6.4.10 GO:0005524 ... P07900 21972823
    119705 2yka:A (-1.00) BS01 peptide ? GO:0003676 ... Q9JJW6 24550725
    119706 2ykb:A (1.93) BS01 YKB 3.6.4.10 GO:0005524 ... P07900 21972823
    119707 2ykc:A (1.67) BS01 YKC 3.6.4.10 GO:0005524 ... P07900 21972823
    119708 2yke:A (1.43) BS01 YKE 3.6.4.10 GO:0005524 ... P07900 21972823
    119709 2ykg:A (2.5) BS01 rna 3.6.4.13 GO:0003676 ... O95786 22000018
    119710 2ykg:A (2.5) BS02 rna 3.6.4.13 GO:0003676 ... O95786 22000018
    119711 2ykg:A (2.5) BS03 ZN 3.6.4.13 GO:0003676 ... O95786 22000018
    119712 2yki:A (1.67) BS01 YKI 3.6.4.10 GO:0005524 ... P07900 21972823 MOAD: Kd=0.35nM
    119713 2ykj:A (1.46) BS01 YKJ 3.6.4.10 GO:0005524 ... P07900 21972823
    119714 2ykk:A (1.79) BS01 CA 3.2.1.151'
    '3.2.1.4
    N/A Q1A2D0 21795708
    119715 2ykl:H (2.1) BS01 NLD N/A N/A N/A 22079050
    119716 2ykl:L (2.1) BS01 NLD N/A N/A N/A 22079050
    119717 2ykm:A (2.9) BS01 YKN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 22017513
    119718 2ykm:A (2.9) BS02 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 22017513
    119719 2ykn:A (2.12) BS01 YKN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 22017513
    119720 2ykn:A (2.12) BS02 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P03366 22017513
    119721 2ykr:B (9.8) BS01 rna ? GO:0000028 ... P0A7V0 21788480
    119722 2ykr:C (9.8) BS01 rna ? GO:0003676 ... P0A7V3 21788480
    119723 2ykr:D (9.8) BS01 rna ? GO:0000028 ... P0A7V8 21788480
    119724 2ykr:E (9.8) BS01 rna ? GO:0000028 ... P0A7W1 21788480
    119725 2ykr:F (9.8) BS01 rna ? GO:0003735 ... P02358 21788480
    119726 2ykr:G (9.8) BS01 rna ? GO:0003723 ... P02359 21788480
    119727 2ykr:H (9.8) BS01 rna ? GO:0000028 ... P0A7W7 21788480
    119728 2ykr:I (9.8) BS01 rna ? GO:0002181 ... P0A7X3 21788480
    119729 2ykr:J (9.8) BS01 rna ? GO:0000049 ... P0A7R5 21788480
    119730 2ykr:K (9.8) BS01 rna ? GO:0002181 ... P0A7R9 21788480
    119731 2ykr:L (9.8) BS01 rna ? GO:0000049 ... P0A7S3 21788480
    119732 2ykr:M (9.8) BS01 rna ? GO:0000049 ... P0A7S9 21788480
    119733 2ykr:N (9.8) BS01 rna ? GO:0000028 ... P0AG59 21788480
    119734 2ykr:O (9.8) BS01 rna ? GO:0000028 ... P0ADZ4 21788480
    119735 2ykr:P (9.8) BS01 rna ? GO:0000028 ... P0A7T3 21788480
    119736 2ykr:Q (9.8) BS01 rna ? GO:0000028 ... P0AG63 21788480
    119737 2ykr:R (9.8) BS01 rna ? GO:0003735 ... P0A7T7 21788480
    119738 2ykr:S (9.8) BS01 rna ? GO:0003723 ... P0A7U3 21788480
    119739 2ykr:T (9.8) BS01 rna ? GO:0000028 ... P0A7U7 21788480
    119740 2ykr:U (9.8) BS01 rna ? GO:0003735 ... P68679 21788480
    119741 2ykr:W (9.8) BS01 rna 3.6.1.- GO:0000028 ... P39286 21788480
    119742 2ykt:A (2.11) BS01 peptide ? GO:0007009 ... Q9UQB8 21893288
    119743 2yku:A (1.9) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119744 2yku:B (1.9) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119745 2yku:C (1.9) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119746 2ykv:A (1.9) BS01 IK2 ? GO:0030170 ... A3EYF7 22745123
    119747 2ykv:A (1.9) BS02 IK2 ? GO:0030170 ... A3EYF7 22745123
    119748 2ykv:B (1.9) BS01 IK2 ? GO:0030170 ... A3EYF7 22745123
    119749 2ykv:B (1.9) BS02 IK2 ? GO:0030170 ... A3EYF7 22745123
    119750 2ykv:C (1.9) BS01 IK2 ? GO:0030170 ... A3EYF7 22745123
    119751 2ykx:A (1.85) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119752 2ykx:A (1.85) BS02 AKG ? GO:0030170 ... A3EYF7 22745123
    119753 2ykx:A (1.85) BS03 PLP ? GO:0030170 ... A3EYF7 22745123
    119754 2ykx:A (1.85) BS04 AKG ? GO:0030170 ... A3EYF7 22745123
    119755 2ykx:B (1.85) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119756 2ykx:B (1.85) BS02 AKG ? GO:0030170 ... A3EYF7 22745123
    119757 2ykx:B (1.85) BS03 PLP ? GO:0030170 ... A3EYF7 22745123
    119758 2ykx:B (1.85) BS04 AKG ? GO:0030170 ... A3EYF7 22745123
    119759 2ykx:C (1.85) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119760 2ykx:C (1.85) BS02 AKG ? GO:0030170 ... A3EYF7 22745123
    119761 2yky:A (1.69) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119762 2yky:A (1.69) BS02 SFE ? GO:0030170 ... A3EYF7 22745123
    119763 2yky:A (1.69) BS03 SFE ? GO:0030170 ... A3EYF7 22745123
    119764 2yky:A (1.69) BS04 PLP ? GO:0030170 ... A3EYF7 22745123
    119765 2yky:A (1.69) BS05 SFE ? GO:0030170 ... A3EYF7 22745123
    119766 2yky:B (1.69) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119767 2yky:B (1.69) BS02 SFE ? GO:0030170 ... A3EYF7 22745123
    119768 2yky:B (1.69) BS03 PLP ? GO:0030170 ... A3EYF7 22745123
    119769 2yky:B (1.69) BS04 SFE ? GO:0030170 ... A3EYF7 22745123
    119770 2yky:C (1.69) BS01 PLP ? GO:0030170 ... A3EYF7 22745123
    119771 2yky:C (1.69) BS02 SFE ? GO:0030170 ... A3EYF7 22745123
    119772 2ykz:A (0.84) BS01 HEC ? GO:0005506 ... P00138 21900609
    119773 2yl0:A (0.95) BS01 HEC ? GO:0005506 ... P00138 21900609
    119774 2yl1:A (1.03) BS01 HEC ? GO:0005506 ... P00138 21900609
    119775 2yl3:A (1.04) BS01 HEC ? GO:0005506 ... P00138 21900609
    119776 2yl5:A (2.15) BS01 MG 3.2.1.52 GO:0004553 ... P49610 22078560
    119777 2yl5:A (2.15) BS02 MG 3.2.1.52 GO:0004553 ... P49610 22078560
    119778 2yl5:A (2.15) BS03 MG 3.2.1.52 GO:0004553 ... P49610 22078560
    119779 2yl5:C (2.15) BS01 MG 3.2.1.52 GO:0004553 ... P49610 22078560
    119780 2yl6:A (1.6) BS01 MG 3.2.1.52 GO:0004553 ... P49610 22078560
    119781 2yl7:A (0.9) BS01 HEC ? GO:0005506 ... P00138 21900609
    119782 2yl8:A (1.75) BS01 MAN 3.2.1.52 GO:0004553 ... P49610 22078560
    119783 2yl8:A (1.75) BS02 MN 3.2.1.52 GO:0004553 ... P49610 22078560
    119784 2yl8:A (1.75) BS03 MN 3.2.1.52 GO:0004553 ... P49610 22078560
    119785 2yl8:A (1.75) BS04 MN 3.2.1.52 GO:0004553 ... P49610 22078560
    119786 2yl9:C (2.65) BS01 MAN 3.2.1.52 GO:0004553 ... P49610 22078560
    119787 2yla:B (2.7) BS01 MAN 3.2.1.52 GO:0004553 ... P49610 22078560
    119788 2yla:C (2.7) BS01 MAN 3.2.1.52 GO:0004553 ... P49610 22078560
    119789 2ylc:A (1.3) BS01 U ? GO:0003723 ... P0A1R0 21737752
    119790 2yld:A (1.25) BS01 HEC ? GO:0005506 ... P00138 21900609
    119791 2yle:A (1.8) BS01 peptide ? GO:0003779 ... Q08AE8 21705804
    119792 2ylg:A (1.05) BS01 HEC ? GO:0005506 ... P00138 21900609
    119793 2ylg:A (1.05) BS02 CMO ? GO:0005506 ... P00138 21900609 MOAD: Kd=28mM
    119794 2ylg:A (1.05) BS03 ASC ? GO:0005506 ... P00138 21900609
    119795 2yli:A (1.45) BS01 HEC ? GO:0005506 ... P00138 21900609
    119796 2ylj:A (1.69) BS01 HEM 1.11.1.7 GO:0004601 ... P00433 N/A
    119797 2ylj:A (1.69) BS02 CA 1.11.1.7 GO:0004601 ... P00433 N/A
    119798 2ylj:A (1.69) BS03 CA 1.11.1.7 GO:0004601 ... P00433 N/A
    119799 2yll:A (1.85) BS01 CA 3.2.1.52 GO:0004553 ... P49610 22078560
    119800 2yln:A (1.12) BS01 CYS ? N/A Q5F9M1 22138345 MOAD: Kd=0.021uM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).