SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    122401 2zm7:A (1.6) BS02 ACA 3.5.1.46 N/A P07061
    P07062
    19476493
    122402 2zm8:A (1.55) BS01 ACA 3.5.1.46 N/A P07061
    P07062
    19521995
    122403 2zm8:A (1.55) BS02 ACA 3.5.1.46 N/A P07061
    P07062
    19521995
    122404 2zm9:A (1.5) BS01 ACA 3.5.1.46 N/A P07061
    P07062
    19521995
    122405 2zm9:A (1.5) BS02 ACA 3.5.1.46 N/A P07061
    P07062
    19521995
    122406 2zma:A (1.51) BS01 ACA 3.5.1.46 N/A P07061
    P07062
    19476493
    122407 2zma:A (1.51) BS02 ACA 3.5.1.46 N/A P07061
    P07062
    19476493
    122408 2zmb:A (2.9) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    122409 2zmb:A (2.9) BS02 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    122410 2zmb:A (2.9) BS03 PXB 3.4.21.- GO:0005576 ... P24627 N/A
    122411 2zmd:A (2.88) BS01 537 2.7.12.1 GO:0004672 ... P33981 18480048 BindingDB: IC50=98nM
    122412 2zmf:A (2.1) BS01 CMP 3.1.4.17 N/A Q9Y233 18477562
    122413 2zmf:B (2.1) BS01 CMP 3.1.4.17 N/A Q9Y233 18477562
    122414 2zmh:A (2.1) BS01 peptide ? GO:0003677 ... P13053 18710208
    122415 2zmh:A (2.1) BS02 NYA ? GO:0003677 ... P13053 18710208
    122416 2zmi:A (1.7) BS01 peptide ? GO:0003677 ... P13053 18710208
    122417 2zmi:A (1.7) BS02 TT2 ? GO:0003677 ... P13053 18710208 MOAD: ic50=3nM
    122418 2zmj:A (2.35) BS01 peptide ? GO:0003677 ... P13053 18710208
    122419 2zmj:A (2.35) BS02 MI4 ? GO:0003677 ... P13053 18710208 MOAD: ic50=30nM
    122420 2zmk:A (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    122421 2zmk:A (2.5) BS02 MN ? GO:0030246 ... O24313 18566508
    122422 2zmk:A (2.5) BS03 CA ? GO:0030246 ... O24313 18566508
    122423 2zmk:B (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    122424 2zmk:B (2.5) BS02 MN ? GO:0030246 ... O24313 18566508
    122425 2zmk:B (2.5) BS03 CA ? GO:0030246 ... O24313 18566508
    122426 2zmk:C (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    122427 2zmk:C (2.5) BS02 MN ? GO:0030246 ... O24313 18566508
    122428 2zmk:C (2.5) BS03 CA ? GO:0030246 ... O24313 18566508
    122429 2zmk:D (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    122430 2zmk:D (2.5) BS02 MN ? GO:0030246 ... O24313 18566508
    122431 2zmk:D (2.5) BS03 CA ? GO:0030246 ... O24313 18566508
    122432 2zml:A (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    122433 2zml:A (2.65) BS02 MN ? GO:0030246 ... O24313 18566508
    122434 2zml:A (2.65) BS03 CA ? GO:0030246 ... O24313 18566508
    122435 2zml:B (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    122436 2zml:B (2.65) BS02 MN ? GO:0030246 ... O24313 18566508
    122437 2zml:B (2.65) BS03 CA ? GO:0030246 ... O24313 18566508
    122438 2zml:C (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    122439 2zml:C (2.65) BS02 MN ? GO:0030246 ... O24313 18566508
    122440 2zml:C (2.65) BS03 CA ? GO:0030246 ... O24313 18566508
    122441 2zml:D (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    122442 2zml:D (2.65) BS02 MN ? GO:0030246 ... O24313 18566508
    122443 2zml:D (2.65) BS03 CA ? GO:0030246 ... O24313 18566508
    122444 2zmm:A (2.1) BS01 35B 3.1.3.48 GO:0004725 ... P18031 18798205 MOAD: Ki=25nM
    122445 2zmn:A (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    122446 2zmn:A (2.9) BS02 MN ? GO:0030246 ... O24313 18566508
    122447 2zmn:A (2.9) BS03 CA ? GO:0030246 ... O24313 18566508
    122448 2zmn:B (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    122449 2zmn:B (2.9) BS02 MN ? GO:0030246 ... O24313 18566508
    122450 2zmn:B (2.9) BS03 CA ? GO:0030246 ... O24313 18566508
    122451 2zmn:C (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    122452 2zmn:C (2.9) BS02 MN ? GO:0030246 ... O24313 18566508
    122453 2zmn:C (2.9) BS03 CA ? GO:0030246 ... O24313 18566508
    122454 2zmn:D (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    122455 2zmn:D (2.9) BS02 MN ? GO:0030246 ... O24313 18566508
    122456 2zmn:D (2.9) BS03 CA ? GO:0030246 ... O24313 18566508
    122457 2zmx:A (1.33) BS01 CU 1.14.18.1 GO:0016491 ... Q83WS2 16436386
    122458 2zmx:A (1.33) BS02 CU 1.14.18.1 GO:0016491 ... Q83WS2 16436386
    122459 2zmx:B (1.33) BS01 CU ? GO:0005507 ... Q83WS1 16436386
    122460 2zmy:A (1.45) BS01 CU 1.14.18.1 GO:0016491 ... Q83WS2 N/A
    122461 2zmy:A (1.45) BS02 CU 1.14.18.1 GO:0016491 ... Q83WS2 N/A
    122462 2zmy:B (1.45) BS01 CU ? GO:0005507 ... Q83WS1 N/A
    122463 2zmz:A (1.37) BS01 CU1 1.14.18.1 GO:0016491 ... Q83WS2 N/A
    122464 2zmz:A (1.37) BS02 CU1 1.14.18.1 GO:0016491 ... Q83WS2 N/A
    122465 2zmz:B (1.37) BS01 CU1 ? GO:0005507 ... Q83WS1 N/A
    122466 2zn7:A (2.1) BS01 410 3.1.3.48 GO:0004725 ... P18031 18798205 MOAD: Ki=13nM
    122467 2zn8:A (2.7) BS01 ZN ? GO:0000287 ... O75340 18940611
    122468 2zn8:A (2.7) BS02 ZN ? GO:0000287 ... O75340 18940611
    122469 2zn8:A (2.7) BS03 ZN ? GO:0000287 ... O75340 18940611
    122470 2zn9:A (2.4) BS01 CA ? GO:0000287 ... O75340 18940611
    122471 2zn9:A (2.4) BS02 CA ? GO:0000287 ... O75340 18940611
    122472 2zn9:A (2.4) BS03 CA ? GO:0000287 ... O75340 18940611
    122473 2zn9:B (2.4) BS01 CA ? GO:0000287 ... O75340 18940611
    122474 2zn9:B (2.4) BS02 CA ? GO:0000287 ... O75340 18940611
    122475 2zn9:B (2.4) BS03 CA ? GO:0000287 ... O75340 18940611
    122476 2znb:A (2.15) BS01 CD 3.5.2.6 GO:0008270 ... P25910 9416622
    122477 2znb:A (2.15) BS02 CD 3.5.2.6 GO:0008270 ... P25910 9416622
    122478 2znb:B (2.15) BS01 CD 3.5.2.6 GO:0008270 ... P25910 9416622
    122479 2znb:B (2.15) BS02 CD 3.5.2.6 GO:0008270 ... P25910 9416622
    122480 2znc:A (2.8) BS01 ZN 4.2.1.1 GO:0004089 ... Q64444 9541386
    122481 2zne:A (2.2) BS01 peptide ? GO:0005509 ... O75340 18940611
    122482 2zne:A (2.2) BS02 ZN ? GO:0005509 ... O75340 18940611
    122483 2zne:A (2.2) BS03 ZN ? GO:0005509 ... O75340 18940611
    122484 2zne:A (2.2) BS04 ZN ? GO:0005509 ... O75340 18940611
    122485 2zne:A (2.2) BS05 ZN ? GO:0005509 ... O75340 18940611
    122486 2zne:B (2.2) BS01 peptide ? GO:0005509 ... O75340 18940611
    122487 2zne:B (2.2) BS02 ZN ? GO:0005509 ... O75340 18940611
    122488 2zne:B (2.2) BS03 ZN ? GO:0005509 ... O75340 18940611
    122489 2zne:B (2.2) BS04 ZN ? GO:0005509 ... O75340 18940611
    122490 2zne:B (2.2) BS05 ZN ? GO:0005509 ... O75340 18940611
    122491 2zni:A (3.1) BS01 rna 6.1.1.26 GO:0000049 ... B0S4P3 19118381
    122492 2zni:A (3.1) BS02 rna 6.1.1.26 GO:0000049 ... B0S4P3 19118381
    122493 2zni:B (3.1) BS01 rna 6.1.1.26 GO:0000049 ... B0S4P3 19118381
    122494 2zni:B (3.1) BS02 rna 6.1.1.26 GO:0000049 ... B0S4P3 19118381
    122495 2znk:H (1.8) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 20156458
    122496 2znk:H (1.8) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 20156458
    122497 2znk:H (1.8) BS03 31U 3.4.21.5 GO:0004252 ... P00734 20156458 MOAD: Ki=0.02uM
    122498 2znl:A (2.3) BS01 peptide 3.1.-.- GO:0003723 ... P03433 18660801
    122499 2znn:A (2.01) BS01 S44 ? GO:0003677 ... Q07869 19622862 BindingDB: EC50=54nM
    122500 2zno:A (2.4) BS01 S44 ? GO:0003677 ... P37231 19622862 BindingDB: EC50=43nM
    122501 2zno:B (2.4) BS01 S44 ? GO:0003677 ... P37231 19622862 BindingDB: EC50=43nM
    122502 2znp:A (3.0) BS01 B7G ? GO:0003677 ... Q03181 19622862
    122503 2znp:A (3.0) BS02 K55 ? GO:0003677 ... Q03181 19622862 BindingDB: EC50=0.72nM
    122504 2znp:B (3.0) BS01 B7G ? GO:0003677 ... Q03181 19622862
    122505 2znp:B (3.0) BS02 K55 ? GO:0003677 ... Q03181 19622862 BindingDB: EC50=0.72nM
    122506 2znq:A (2.65) BS01 B7G ? GO:0003677 ... Q03181 19622862
    122507 2znq:A (2.65) BS02 401 ? GO:0003677 ... Q03181 19622862 BindingDB: EC50=12nM
    122508 2znq:B (2.65) BS01 B7G ? GO:0003677 ... Q03181 19622862
    122509 2znq:B (2.65) BS02 401 ? GO:0003677 ... Q03181 19622862 BindingDB: EC50=12nM
    122510 2znr:A (1.2) BS01 ZN 3.4.19.- GO:0008233 ... Q96FJ0 18758443
    122511 2znr:A (1.2) BS02 ZN 3.4.19.- GO:0008233 ... Q96FJ0 18758443
    122512 2zns:A (2.0) BS01 GLU ? GO:0015276 ... P39086 21893069
    122513 2znt:A (1.6) BS01 DYH ? GO:0015276 ... P39086 21893069 MOAD: Ki=0.5nM
    BindingDB: Ki=0.740000nM
    122514 2znu:A (1.8) BS01 NDZ ? GO:0015276 ... P39086 21893069 MOAD: Ki=7.7nM
    122515 2znv:A (1.6) BS01 ZN 3.4.19.- GO:0008233 ... Q96FJ0 18758443
    122516 2znv:D (1.6) BS01 ZN 3.4.19.- GO:0008233 ... Q96FJ0 18758443
    122517 2zny:A (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122518 2zny:B (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122519 2zny:C (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122520 2zny:C (2.59) BS02 ARG ? GO:0005515 ... O59188 19004003
    122521 2zny:D (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122522 2zny:D (2.59) BS02 ARG ? GO:0005515 ... O59188 19004003
    122523 2zny:E (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122524 2zny:E (2.59) BS02 ARG ? GO:0005515 ... O59188 19004003
    122525 2zny:F (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122526 2zny:F (2.59) BS02 ARG ? GO:0005515 ... O59188 19004003
    122527 2zny:G (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122528 2zny:H (2.59) BS01 ARG ? GO:0005515 ... O59188 19004003
    122529 2znz:A (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122530 2znz:B (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122531 2znz:C (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122532 2znz:D (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122533 2znz:E (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122534 2znz:F (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122535 2znz:G (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122536 2znz:H (2.39) BS01 LYS ? GO:0005515 ... O59188 19004003
    122537 2zo0:B (2.19) BS01 dna 2.3.2.27 N/A Q8VDF2 18772888
    122538 2zo0:B (2.19) BS02 dna 2.3.2.27 N/A Q8VDF2 18772888
    122539 2zo1:B (1.96) BS01 dna 2.3.2.27 N/A Q8VDF2 18772888
    122540 2zo1:B (1.96) BS02 dna 2.3.2.27 N/A Q8VDF2 18772888
    122541 2zo2:B (3.09) BS01 dna 2.3.2.27 N/A Q8VDF2 18772888
    122542 2zo3:H (1.7) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 19520086
    122543 2zo3:H (1.7) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 19520086
    122544 2zo3:H (1.7) BS03 33U 3.4.21.5 GO:0004252 ... P00734 19520086 MOAD: Ki=0.1nM
    BindingDB: Ki=0.036000nM
    122545 2zo4:A (2.1) BS01 ZN 3.-.-.- N/A Q5SIE5 18767153
    122546 2zo4:A (2.1) BS02 ZN 3.-.-.- N/A Q5SIE5 18767153
    122547 2zo5:A (1.7) BS01 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122548 2zo5:A (1.7) BS02 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122549 2zo5:A (1.7) BS03 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122550 2zo5:A (1.7) BS04 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122551 2zo5:A (1.7) BS05 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122552 2zo5:A (1.7) BS06 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122553 2zo5:A (1.7) BS07 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122554 2zo5:A (1.7) BS08 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122555 2zo5:A (1.7) BS09 AZI 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122556 2zo5:A (1.7) BS10 CA 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122557 2zo5:A (1.7) BS11 CA 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122558 2zo5:B (1.7) BS01 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122559 2zo5:B (1.7) BS02 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122560 2zo5:B (1.7) BS03 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122561 2zo5:B (1.7) BS04 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122562 2zo5:B (1.7) BS05 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122563 2zo5:B (1.7) BS06 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122564 2zo5:B (1.7) BS07 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122565 2zo5:B (1.7) BS08 HEC 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122566 2zo5:B (1.7) BS09 AZI 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122567 2zo5:B (1.7) BS10 CA 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122568 2zo5:B (1.7) BS11 CA 1.7.2.2 GO:0005509 ... L0DSL2 19393666
    122569 2zo9:B (2.2) BS01 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122570 2zo9:B (2.2) BS02 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122571 2zo9:B (2.2) BS03 MLI 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122572 2zo9:C (2.2) BS01 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122573 2zo9:C (2.2) BS02 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122574 2zo9:C (2.2) BS03 MLI 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122575 2zoa:A (2.4) BS01 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122576 2zoa:A (2.4) BS02 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122577 2zoa:A (2.4) BS03 MLI 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122578 2zoa:B (2.4) BS01 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122579 2zoa:B (2.4) BS02 FE2 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122580 2zoa:B (2.4) BS03 MLI 3.1.4.46 GO:0004112 ... Q6XBH1 18678932
    122581 2zoc:A (2.0) BS01 CA ? GO:0000122 ... P09525 N/A
    122582 2zoc:A (2.0) BS02 CA ? GO:0000122 ... P09525 N/A
    122583 2zoc:A (2.0) BS03 CA ? GO:0000122 ... P09525 N/A
    122584 2zoc:A (2.0) BS04 CA ? GO:0000122 ... P09525 N/A
    122585 2zoc:B (2.0) BS01 CA ? GO:0000122 ... P09525 N/A
    122586 2zoc:B (2.0) BS02 CA ? GO:0000122 ... P09525 N/A
    122587 2zoc:B (2.0) BS03 CA ? GO:0000122 ... P09525 N/A
    122588 2zoc:B (2.0) BS04 CA ? GO:0000122 ... P09525 N/A
    122589 2zoe:B (2.6) BS01 SLB ? GO:0005576 ... P46085 19071137
    122590 2zof:A (2.3) BS01 MN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122591 2zof:A (2.3) BS02 MN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122592 2zof:A (2.3) BS03 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    122593 2zof:A (2.3) BS04 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    122594 2zof:B (2.3) BS01 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    122595 2zof:B (2.3) BS02 MN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122596 2zof:B (2.3) BS03 MN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122597 2zof:B (2.3) BS04 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540 MOAD: ic50=7nM
    122598 2zog:A (1.7) BS01 ZN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122599 2zog:A (1.7) BS02 ZN 3.4.13.18 GO:0004180 ... Q9D1A2 18550540
    122600 2zog:A (1.7) BS03 BES 3.4.13.18 GO:0004180 ... Q9D1A2 18550540

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).