SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    123801 3a0h:K (4.0) BS03 CLA ? GO:0005737 ... P19054 19433803
    123802 3a0h:M (4.0) BS01 CLA ? GO:0005737 ... P12312 19433803
    123803 3a0h:T (4.0) BS01 IOD ? GO:0009523 ... P12313 19433803
    123804 3a0h:V (4.0) BS01 HEM ? GO:0005506 ... P0A387 19433803
    123805 3a0h:Z (4.0) BS01 peptide ? GO:0009523 ... D0VWR5 19433803
    123806 3a0h:a (4.0) BS01 OEC 1.10.3.9 GO:0005506 ... P51765 19433803
    123807 3a0h:a (4.0) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 19433803
    123808 3a0h:a (4.0) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123809 3a0h:a (4.0) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123810 3a0h:a (4.0) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123811 3a0h:a (4.0) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123812 3a0h:a (4.0) BS07 IOD 1.10.3.9 GO:0005506 ... P51765 19433803
    123813 3a0h:a (4.0) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123814 3a0h:a (4.0) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123815 3a0h:a (4.0) BS10 PHO 1.10.3.9 GO:0005506 ... P51765 19433803
    123816 3a0h:a (4.0) BS11 CLA 1.10.3.9 GO:0005506 ... P51765 19433803
    123817 3a0h:b (4.0) BS01 CLA ? GO:0009521 ... D0VWR1 19433803
    123818 3a0h:b (4.0) BS02 CLA ? GO:0009521 ... D0VWR1 19433803
    123819 3a0h:b (4.0) BS03 CLA ? GO:0009521 ... D0VWR1 19433803
    123820 3a0h:b (4.0) BS04 CLA ? GO:0009521 ... D0VWR1 19433803
    123821 3a0h:b (4.0) BS05 CLA ? GO:0009521 ... D0VWR1 19433803
    123822 3a0h:b (4.0) BS06 CLA ? GO:0009521 ... D0VWR1 19433803
    123823 3a0h:b (4.0) BS07 CLA ? GO:0009521 ... D0VWR1 19433803
    123824 3a0h:b (4.0) BS08 CLA ? GO:0009521 ... D0VWR1 19433803
    123825 3a0h:b (4.0) BS09 CLA ? GO:0009521 ... D0VWR1 19433803
    123826 3a0h:b (4.0) BS10 CLA ? GO:0009521 ... D0VWR1 19433803
    123827 3a0h:b (4.0) BS11 CLA ? GO:0009521 ... D0VWR1 19433803
    123828 3a0h:b (4.0) BS12 CLA ? GO:0009521 ... D0VWR1 19433803
    123829 3a0h:b (4.0) BS13 CLA ? GO:0009521 ... D0VWR1 19433803
    123830 3a0h:b (4.0) BS14 CLA ? GO:0009521 ... D0VWR1 19433803
    123831 3a0h:b (4.0) BS15 CLA ? GO:0009521 ... D0VWR1 19433803
    123832 3a0h:c (4.0) BS01 OEC ? GO:0005737 ... D0VWR7 19433803
    123833 3a0h:c (4.0) BS02 CLA ? GO:0005737 ... D0VWR7 19433803
    123834 3a0h:c (4.0) BS03 CLA ? GO:0005737 ... D0VWR7 19433803
    123835 3a0h:c (4.0) BS04 CLA ? GO:0005737 ... D0VWR7 19433803
    123836 3a0h:c (4.0) BS05 CLA ? GO:0005737 ... D0VWR7 19433803
    123837 3a0h:c (4.0) BS06 CLA ? GO:0005737 ... D0VWR7 19433803
    123838 3a0h:c (4.0) BS07 CLA ? GO:0005737 ... D0VWR7 19433803
    123839 3a0h:c (4.0) BS08 CLA ? GO:0005737 ... D0VWR7 19433803
    123840 3a0h:c (4.0) BS09 CLA ? GO:0005737 ... D0VWR7 19433803
    123841 3a0h:c (4.0) BS10 CLA ? GO:0005737 ... D0VWR7 19433803
    123842 3a0h:c (4.0) BS11 CLA ? GO:0005737 ... D0VWR7 19433803
    123843 3a0h:c (4.0) BS12 CLA ? GO:0005737 ... D0VWR7 19433803
    123844 3a0h:c (4.0) BS13 CLA ? GO:0005737 ... D0VWR7 19433803
    123845 3a0h:c (4.0) BS14 CLA ? GO:0005737 ... D0VWR7 19433803
    123846 3a0h:d (4.0) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123847 3a0h:d (4.0) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123848 3a0h:d (4.0) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123849 3a0h:d (4.0) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123850 3a0h:d (4.0) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123851 3a0h:d (4.0) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123852 3a0h:d (4.0) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123853 3a0h:d (4.0) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123854 3a0h:d (4.0) BS09 IOD 1.10.3.9 GO:0005737 ... D0VWR8 19433803
    123855 3a0h:e (4.0) BS01 peptide ? GO:0005506 ... P12238 19433803
    123856 3a0h:e (4.0) BS02 HEM ? GO:0005506 ... P12238 19433803
    123857 3a0h:f (4.0) BS01 HEM ? GO:0005506 ... P12239 19433803
    123858 3a0h:h (4.0) BS01 CLA ? GO:0009523 ... P19052 19433803
    123859 3a0h:h (4.0) BS02 CLA ? GO:0009523 ... P19052 19433803
    123860 3a0h:h (4.0) BS03 CLA ? GO:0009523 ... P19052 19433803
    123861 3a0h:i (4.0) BS01 CLA ? GO:0005737 ... P12240 19433803
    123862 3a0h:k (4.0) BS01 peptide ? GO:0005737 ... P19054 19433803
    123863 3a0h:k (4.0) BS02 CLA ? GO:0005737 ... P19054 19433803
    123864 3a0h:k (4.0) BS03 CLA ? GO:0005737 ... P19054 19433803
    123865 3a0h:m (4.0) BS01 CLA ? GO:0005737 ... P12312 19433803
    123866 3a0h:v (4.0) BS01 HEM ? GO:0005506 ... P0A387 19433803
    123867 3a0h:z (4.0) BS01 peptide ? GO:0009523 ... D0VWR5 19433803
    123868 3a0i:X (2.2) BS01 GLC 2.7.1.1 GO:0001678 ... P35557 19362831
    123869 3a0i:X (2.2) BS02 AJI 2.7.1.1 GO:0001678 ... P35557 19362831 BindingDB: EC50=250nM
    123870 3a0k:A (1.8) BS01 MN ? GO:0030246 ... D5MNX4 21277932
    123871 3a0k:A (1.8) BS02 CA ? GO:0030246 ... D5MNX4 21277932
    123872 3a0k:C (1.8) BS01 MN ? GO:0030246 ... D5MNX4 21277932
    123873 3a0k:C (1.8) BS02 CA ? GO:0030246 ... D5MNX4 21277932
    123874 3a0k:E (1.8) BS01 MN ? GO:0030246 ... D5MNX4 21277932
    123875 3a0k:E (1.8) BS02 CA ? GO:0030246 ... D5MNX4 21277932
    123876 3a0k:E (1.8) BS03 ABA ? GO:0030246 ... D5MNX4 21277932
    123877 3a0k:E (1.8) BS04 ABA ? GO:0030246 ... D5MNX4 21277932
    123878 3a0k:G (1.8) BS01 ABA ? GO:0030246 ... D5MNX4 21277932
    123879 3a0k:G (1.8) BS02 MN ? GO:0030246 ... D5MNX4 21277932
    123880 3a0k:G (1.8) BS03 CA ? GO:0030246 ... D5MNX4 21277932
    123881 3a0k:G (1.8) BS04 ABA ? GO:0030246 ... D5MNX4 21277932
    123882 3a0n:A (1.45) BS01 BDP 4.2.2.3 N/A Q9DTZ2 19846561
    123883 3a0t:A (1.91) BS01 ADP 2.7.13.3 GO:0016310 ... Q9X180 19836334
    123884 3a0u:A (1.66) BS01 MG ? GO:0000160 ... Q9X181 19836334
    123885 3a0u:A (1.66) BS02 BEF ? GO:0000160 ... Q9X181 19836334
    123886 3a0w:A (1.69) BS01 EMT 2.7.13.3 GO:0016310 ... Q9X180 19836334
    123887 3a10:A (1.63) BS01 MG ? GO:0000160 ... Q9X181 19836334
    123888 3a10:A (1.63) BS02 BEF ? GO:0000160 ... Q9X181 19836334
    123889 3a12:A (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123890 3a12:A (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123891 3a12:B (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123892 3a12:B (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123893 3a12:C (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123894 3a12:C (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123895 3a12:D (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123896 3a12:D (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123897 3a12:E (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123898 3a12:E (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123899 3a12:F (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123900 3a12:F (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123901 3a12:G (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123902 3a12:G (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123903 3a12:H (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123904 3a12:H (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123905 3a12:I (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123906 3a12:I (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123907 3a12:J (2.3) BS01 MG 4.1.1.39 GO:0000287 ... O93627 20926376
    123908 3a12:J (2.3) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 20926376
    123909 3a13:A (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123910 3a13:A (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123911 3a13:B (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123912 3a13:B (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123913 3a13:C (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123914 3a13:C (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123915 3a13:D (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123916 3a13:D (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123917 3a13:E (2.34) BS01 CA 4.1.1.39 GO:0000287 ... O93627 N/A
    123918 3a13:E (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123919 3a13:F (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123920 3a13:F (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123921 3a13:G (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123922 3a13:G (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123923 3a13:H (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123924 3a13:H (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123925 3a13:I (2.34) BS01 MG 4.1.1.39 GO:0000287 ... O93627 N/A
    123926 3a13:I (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123927 3a13:J (2.34) BS01 CA 4.1.1.39 GO:0000287 ... O93627 N/A
    123928 3a13:J (2.34) BS02 CAP 4.1.1.39 GO:0000287 ... O93627 N/A
    123929 3a14:A (2.0) BS01 NDP 1.1.1.267 GO:0008299 ... Q9WZZ1 20353826
    123930 3a14:A (2.0) BS02 NDP 1.1.1.267 GO:0008299 ... Q9WZZ1 20353826
    123931 3a14:A (2.0) BS03 MG 1.1.1.267 GO:0008299 ... Q9WZZ1 20353826
    123932 3a14:B (2.0) BS01 NDP 1.1.1.267 GO:0008299 ... Q9WZZ1 20353826
    123933 3a14:B (2.0) BS02 MG 1.1.1.267 GO:0008299 ... Q9WZZ1 20353826
    123934 3a15:A (1.79) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123935 3a15:B (1.79) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123936 3a15:C (1.79) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123937 3a15:D (1.79) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123938 3a16:A (1.6) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123939 3a16:A (1.6) BS02 PXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123940 3a16:B (1.6) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123941 3a16:B (1.6) BS02 PXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123942 3a16:C (1.6) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123943 3a16:C (1.6) BS02 PXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123944 3a16:D (1.6) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123945 3a16:D (1.6) BS02 PXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123946 3a17:A (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123947 3a17:A (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123948 3a17:B (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123949 3a17:B (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123950 3a17:C (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123951 3a17:C (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123952 3a17:D (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123953 3a17:D (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123954 3a17:E (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123955 3a17:E (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123956 3a17:F (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123957 3a17:F (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123958 3a17:G (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123959 3a17:G (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123960 3a17:H (2.5) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123961 3a17:H (2.5) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123962 3a18:A (1.8) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123963 3a18:A (1.8) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123964 3a18:B (1.8) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123965 3a18:B (1.8) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123966 3a18:C (1.8) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123967 3a18:C (1.8) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123968 3a18:D (1.8) BS01 HEM 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123969 3a18:D (1.8) BS02 BXO 4.8.1.2 GO:0034013 ... Q76K71 19740758
    123970 3a1a:A (2.3) BS01 ZN 2.1.1.-
    2.1.1.37
    N/A Q9Y6K1 19834512
    123971 3a1a:A (2.3) BS02 ZN 2.1.1.-
    2.1.1.37
    N/A Q9Y6K1 19834512
    123972 3a1a:A (2.3) BS03 ZN 2.1.1.-
    2.1.1.37
    N/A Q9Y6K1 19834512
    123973 3a1b:A (2.292) BS01 ZN 2.1.1.-
    2.1.1.37
    GO:0000786 ... P68431
    Q9Y6K1
    19834512
    123974 3a1b:A (2.292) BS02 ZN 2.1.1.-
    2.1.1.37
    GO:0000786 ... P68431
    Q9Y6K1
    19834512
    123975 3a1b:A (2.292) BS03 ZN 2.1.1.-
    2.1.1.37
    GO:0000786 ... P68431
    Q9Y6K1
    19834512
    123976 3a1c:A (1.85) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~0.1mM
    123977 3a1c:B (1.85) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~0.1mM
    123978 3a1d:A (1.85) BS01 ADP 7.2.2.8 GO:0000166 ... O29777 19478797
    123979 3a1d:B (1.85) BS01 ADP 7.2.2.8 GO:0000166 ... O29777 19478797
    123980 3a1e:A (1.95) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~2.2mM
    123981 3a1e:B (1.95) BS01 ACP 7.2.2.8 GO:0000166 ... O29777 19478797 MOAD: Kd~2.2mM
    123982 3a1i:A (2.32) BS01 UNU 3.5.1.4 GO:0003824 ... Q7DKE4 19819352
    123983 3a1l:A (2.5) BS01 HEM ? GO:0004497 ... Q83WG3 19385626
    123984 3a1l:A (2.5) BS02 2CC ? GO:0004497 ... Q83WG3 19385626
    123985 3a1n:A (2.07) BS01 NAD 1.1.1.103 GO:0006567 ... Q97BK3 22374996
    123986 3a1n:B (2.07) BS01 NAD 1.1.1.103 GO:0006567 ... Q97BK3 22374996
    123987 3a1s:A (1.5) BS01 GDP ? GO:0005525 ... Q9WXQ8 19733088 MOAD: Kd=14.8uM
    123988 3a1s:B (1.5) BS01 GDP ? GO:0005525 ... Q9WXQ8 19733088 MOAD: Kd=14.8uM
    123989 3a1t:A (1.8) BS01 GDP ? GO:0005525 ... Q9WXQ8 19733088 MOAD: Kd=14.8uM
    123990 3a1u:A (1.8) BS01 GNP ? GO:0005525 ... Q9WXQ8 19733088
    123991 3a1u:B (1.8) BS01 GNP ? GO:0005525 ... Q9WXQ8 19733088
    123992 3a1z:A (2.59) BS01 ZN ? N/A Q9U556 23437107
    123993 3a1z:A (2.59) BS02 ZN ? N/A Q9U556 23437107
    123994 3a1z:A (2.59) BS03 ZN ? N/A Q9U556 23437107
    123995 3a1z:B (2.59) BS01 ZN ? N/A Q9U556 23437107
    123996 3a1z:B (2.59) BS02 ZN ? N/A Q9U556 23437107
    123997 3a1z:B (2.59) BS03 ZN ? N/A Q9U556 23437107
    123998 3a1z:B (2.59) BS04 ZN ? N/A Q9U556 23437107
    123999 3a1z:C (2.59) BS01 ZN ? N/A Q9U556 23437107
    124000 3a1z:C (2.59) BS02 ZN ? N/A Q9U556 23437107

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).