SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    131001 3cc2:2 (2.4) BS01 rna ? GO:0003735 ... P22452 18455733
    131002 3cc2:3 (2.4) BS01 rna ? GO:0003735 ... P32411 18455733
    131003 3cc2:3 (2.4) BS02 MG ? GO:0003735 ... P32411 18455733
    131004 3cc2:A (2.4) BS01 rna ? GO:0002181 ... P20276 18455733
    131005 3cc2:A (2.4) BS02 MG ? GO:0002181 ... P20276 18455733
    131006 3cc2:B (2.4) BS01 rna ? GO:0003723 ... P20279 18455733
    131007 3cc2:C (2.4) BS01 rna ? GO:0003735 ... P12735 18455733
    131008 3cc2:D (2.4) BS01 rna ? GO:0000049 ... P14124 18455733
    131009 3cc2:D (2.4) BS02 rna ? GO:0000049 ... P14124 18455733
    131010 3cc2:E (2.4) BS01 rna ? GO:0002181 ... P14135 18455733
    131011 3cc2:F (2.4) BS01 rna ? GO:0001682 ... P12743 18455733
    131012 3cc2:H (2.4) BS01 rna ? GO:0003735 ... P60617 18455733
    131013 3cc2:I (2.4) BS01 rna ? GO:0003735 ... P14122 18455733
    131014 3cc2:J (2.4) BS01 rna ? GO:0003729 ... P29198 18455733
    131015 3cc2:K (2.4) BS01 rna ? GO:0003735 ... P22450 18455733
    131016 3cc2:L (2.4) BS01 rna ? GO:0003735 ... P12737 18455733
    131017 3cc2:M (2.4) BS01 rna ? GO:0002181 ... P60618 18455733
    131018 3cc2:N (2.4) BS01 rna ? GO:0000027 ... P14123 18455733
    131019 3cc2:N (2.4) BS02 rna ? GO:0000027 ... P14123 18455733
    131020 3cc2:O (2.4) BS01 rna ? GO:0003723 ... P12733 18455733
    131021 3cc2:P (2.4) BS01 rna ? GO:0003723 ... P14119 18455733
    131022 3cc2:Q (2.4) BS01 rna ? GO:0003735 ... P12734 18455733
    131023 3cc2:Q (2.4) BS02 rna ? GO:0003735 ... P12734 18455733
    131024 3cc2:R (2.4) BS01 rna ? GO:0002181 ... P10970 18455733
    131025 3cc2:S (2.4) BS01 rna ? GO:0003735 ... P12732 18455733
    131026 3cc2:T (2.4) BS01 rna ? GO:0003723 ... P10972 18455733
    131027 3cc2:T (2.4) BS02 MG ? GO:0003723 ... P10972 18455733
    131028 3cc2:U (2.4) BS01 rna ? GO:0003735 ... P14116 18455733
    131029 3cc2:V (2.4) BS01 rna ? GO:0003735 ... P10971 18455733
    131030 3cc2:W (2.4) BS01 rna ? GO:0000463 ... P14121 18455733
    131031 3cc2:W (2.4) BS02 rna ? GO:0000463 ... P14121 18455733
    131032 3cc2:X (2.4) BS01 rna ? GO:0002181 ... P18138 18455733
    131033 3cc2:Y (2.4) BS01 rna ? GO:0000166 ... P12736 18455733
    131034 3cc2:Y (2.4) BS02 MG ? GO:0000166 ... P12736 18455733
    131035 3cc2:Z (2.4) BS01 rna ? GO:0003735 ... P60619 18455733
    131036 3cc4:1 (2.7) BS01 rna ? GO:0003723 ... P32410 18455733
    131037 3cc4:2 (2.7) BS01 rna ? GO:0003735 ... P22452 18455733
    131038 3cc4:3 (2.7) BS01 rna ? GO:0003735 ... P32411 18455733
    131039 3cc4:A (2.7) BS01 rna ? GO:0002181 ... P20276 18455733
    131040 3cc4:A (2.7) BS02 MG ? GO:0002181 ... P20276 18455733
    131041 3cc4:B (2.7) BS01 rna ? GO:0003723 ... P20279 18455733
    131042 3cc4:C (2.7) BS01 rna ? GO:0003735 ... P12735 18455733
    131043 3cc4:D (2.7) BS01 rna ? GO:0000049 ... P14124 18455733
    131044 3cc4:D (2.7) BS02 rna ? GO:0000049 ... P14124 18455733
    131045 3cc4:E (2.7) BS01 rna ? GO:0002181 ... P14135 18455733
    131046 3cc4:F (2.7) BS01 rna ? GO:0001682 ... P12743 18455733
    131047 3cc4:H (2.7) BS01 rna ? GO:0003735 ... P60617 18455733
    131048 3cc4:H (2.7) BS02 rna ? GO:0003735 ... P60617 18455733
    131049 3cc4:I (2.7) BS01 rna ? GO:0003735 ... P14122 18455733
    131050 3cc4:J (2.7) BS01 rna ? GO:0003729 ... P29198 18455733
    131051 3cc4:K (2.7) BS01 rna ? GO:0003735 ... P22450 18455733
    131052 3cc4:L (2.7) BS01 rna ? GO:0003735 ... P12737 18455733
    131053 3cc4:M (2.7) BS01 rna ? GO:0002181 ... P60618 18455733
    131054 3cc4:N (2.7) BS01 rna ? GO:0000027 ... P14123 18455733
    131055 3cc4:N (2.7) BS02 rna ? GO:0000027 ... P14123 18455733
    131056 3cc4:O (2.7) BS01 rna ? GO:0003723 ... P12733 18455733
    131057 3cc4:P (2.7) BS01 rna ? GO:0003723 ... P14119 18455733
    131058 3cc4:Q (2.7) BS01 rna ? GO:0003735 ... P12734 18455733
    131059 3cc4:Q (2.7) BS02 rna ? GO:0003735 ... P12734 18455733
    131060 3cc4:R (2.7) BS01 rna ? GO:0002181 ... P10970 18455733
    131061 3cc4:S (2.7) BS01 rna ? GO:0003735 ... P12732 18455733
    131062 3cc4:T (2.7) BS01 rna ? GO:0003723 ... P10972 18455733
    131063 3cc4:T (2.7) BS02 MG ? GO:0003723 ... P10972 18455733
    131064 3cc4:U (2.7) BS01 rna ? GO:0003735 ... P14116 18455733
    131065 3cc4:V (2.7) BS01 rna ? GO:0003735 ... P10971 18455733
    131066 3cc4:W (2.7) BS01 rna ? GO:0000463 ... P14121 18455733
    131067 3cc4:W (2.7) BS02 rna ? GO:0000463 ... P14121 18455733
    131068 3cc4:X (2.7) BS01 rna ? GO:0002181 ... P18138 18455733
    131069 3cc4:Y (2.7) BS01 rna ? GO:0000166 ... P12736 18455733
    131070 3cc4:Y (2.7) BS02 MG ? GO:0000166 ... P12736 18455733
    131071 3cc4:Z (2.7) BS01 rna ? GO:0003735 ... P60619 18455733
    131072 3cc5:A (1.91) BS01 peptide ? N/A P01899 19789338
    131073 3cc5:D (1.91) BS01 peptide ? N/A P01899 19789338
    131074 3cc7:1 (2.7) BS01 rna ? GO:0003723 ... P32410 18455733
    131075 3cc7:2 (2.7) BS01 rna ? GO:0003735 ... P22452 18455733
    131076 3cc7:3 (2.7) BS01 rna ? GO:0003735 ... P32411 18455733
    131077 3cc7:A (2.7) BS01 rna ? GO:0002181 ... P20276 18455733
    131078 3cc7:A (2.7) BS02 MG ? GO:0002181 ... P20276 18455733
    131079 3cc7:A (2.7) BS03 MG ? GO:0002181 ... P20276 18455733
    131080 3cc7:B (2.7) BS01 rna ? GO:0003723 ... P20279 18455733
    131081 3cc7:C (2.7) BS01 rna ? GO:0003735 ... P12735 18455733
    131082 3cc7:D (2.7) BS01 rna ? GO:0000049 ... P14124 18455733
    131083 3cc7:D (2.7) BS02 rna ? GO:0000049 ... P14124 18455733
    131084 3cc7:E (2.7) BS01 rna ? GO:0002181 ... P14135 18455733
    131085 3cc7:F (2.7) BS01 rna ? GO:0001682 ... P12743 18455733
    131086 3cc7:H (2.7) BS01 rna ? GO:0003735 ... P60617 18455733
    131087 3cc7:H (2.7) BS02 rna ? GO:0003735 ... P60617 18455733
    131088 3cc7:I (2.7) BS01 rna ? GO:0003735 ... P14122 18455733
    131089 3cc7:J (2.7) BS01 rna ? GO:0003729 ... P29198 18455733
    131090 3cc7:K (2.7) BS01 rna ? GO:0003735 ... P22450 18455733
    131091 3cc7:L (2.7) BS01 rna ? GO:0003735 ... P12737 18455733
    131092 3cc7:M (2.7) BS01 rna ? GO:0002181 ... P60618 18455733
    131093 3cc7:N (2.7) BS01 rna ? GO:0000027 ... P14123 18455733
    131094 3cc7:N (2.7) BS02 rna ? GO:0000027 ... P14123 18455733
    131095 3cc7:O (2.7) BS01 rna ? GO:0003723 ... P12733 18455733
    131096 3cc7:P (2.7) BS01 rna ? GO:0003723 ... P14119 18455733
    131097 3cc7:Q (2.7) BS01 rna ? GO:0003735 ... P12734 18455733
    131098 3cc7:Q (2.7) BS02 rna ? GO:0003735 ... P12734 18455733
    131099 3cc7:R (2.7) BS01 rna ? GO:0002181 ... P10970 18455733
    131100 3cc7:S (2.7) BS01 rna ? GO:0003735 ... P12732 18455733
    131101 3cc7:T (2.7) BS01 rna ? GO:0003723 ... P10972 18455733
    131102 3cc7:T (2.7) BS02 MG ? GO:0003723 ... P10972 18455733
    131103 3cc7:U (2.7) BS01 rna ? GO:0003735 ... P14116 18455733
    131104 3cc7:V (2.7) BS01 rna ? GO:0003735 ... P10971 18455733
    131105 3cc7:W (2.7) BS01 rna ? GO:0000463 ... P14121 18455733
    131106 3cc7:W (2.7) BS02 rna ? GO:0000463 ... P14121 18455733
    131107 3cc7:X (2.7) BS01 rna ? GO:0002181 ... P18138 18455733
    131108 3cc7:Y (2.7) BS01 rna ? GO:0000166 ... P12736 18455733
    131109 3cc7:Y (2.7) BS02 MG ? GO:0000166 ... P12736 18455733
    131110 3cc7:Z (2.7) BS01 rna ? GO:0003735 ... P60619 18455733
    131111 3cc9:A (2.3) BS01 GRG ? GO:0004161 ... A5K4U6 N/A
    131112 3cc9:A (2.3) BS02 GRG ? GO:0004161 ... A5K4U6 N/A
    131113 3cc9:B (2.3) BS01 GRG ? GO:0004161 ... A5K4U6 N/A
    131114 3cc9:B (2.3) BS02 GRG ? GO:0004161 ... A5K4U6 N/A
    131115 3cc9:C (2.3) BS01 GRG ? GO:0004161 ... A5K4U6 N/A
    131116 3cc9:C (2.3) BS02 GRG ? GO:0004161 ... A5K4U6 N/A
    131117 3cc9:D (2.3) BS01 GRG ? GO:0004161 ... A5K4U6 N/A
    131118 3cc9:D (2.3) BS02 GRG ? GO:0004161 ... A5K4U6 N/A
    131119 3ccb:A (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    131120 3ccb:B (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    131121 3ccb:C (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    131122 3ccb:D (2.49) BS01 B2Y 3.4.14.5 GO:0001618 ... P27487 18346892 MOAD: ic50=30uM
    BindingDB: IC50=30000nM
    131123 3ccc:A (2.71) BS01 7AC 3.4.14.5 GO:0001618 ... P27487 18346892 BindingDB: IC50=8nM
    131124 3ccc:B (2.71) BS01 7AC 3.4.14.5 GO:0001618 ... P27487 18346892 BindingDB: IC50=8nM
    131125 3ccc:C (2.71) BS01 7AC 3.4.14.5 GO:0001618 ... P27487 18346892 BindingDB: IC50=8nM
    131126 3ccc:D (2.71) BS01 7AC 3.4.14.5 GO:0001618 ... P27487 18346892 BindingDB: IC50=8nM
    131127 3cce:1 (2.75) BS01 rna ? GO:0003723 ... P32410 18455733
    131128 3cce:2 (2.75) BS01 rna ? GO:0003735 ... P22452 18455733
    131129 3cce:3 (2.75) BS01 rna ? GO:0003735 ... P32411 18455733
    131130 3cce:A (2.75) BS01 rna ? GO:0002181 ... P20276 18455733
    131131 3cce:A (2.75) BS02 MG ? GO:0002181 ... P20276 18455733
    131132 3cce:A (2.75) BS03 MG ? GO:0002181 ... P20276 18455733
    131133 3cce:B (2.75) BS01 rna ? GO:0003723 ... P20279 18455733
    131134 3cce:C (2.75) BS01 rna ? GO:0003735 ... P12735 18455733
    131135 3cce:D (2.75) BS01 rna ? GO:0000049 ... P14124 18455733
    131136 3cce:D (2.75) BS02 rna ? GO:0000049 ... P14124 18455733
    131137 3cce:E (2.75) BS01 rna ? GO:0002181 ... P14135 18455733
    131138 3cce:F (2.75) BS01 rna ? GO:0001682 ... P12743 18455733
    131139 3cce:H (2.75) BS01 rna ? GO:0003735 ... P60617 18455733
    131140 3cce:I (2.75) BS01 rna ? GO:0003735 ... P14122 18455733
    131141 3cce:J (2.75) BS01 rna ? GO:0003729 ... P29198 18455733
    131142 3cce:K (2.75) BS01 rna ? GO:0003735 ... P22450 18455733
    131143 3cce:L (2.75) BS01 rna ? GO:0003735 ... P12737 18455733
    131144 3cce:M (2.75) BS01 rna ? GO:0002181 ... P60618 18455733
    131145 3cce:N (2.75) BS01 rna ? GO:0000027 ... P14123 18455733
    131146 3cce:N (2.75) BS02 rna ? GO:0000027 ... P14123 18455733
    131147 3cce:O (2.75) BS01 rna ? GO:0003723 ... P12733 18455733
    131148 3cce:P (2.75) BS01 rna ? GO:0003723 ... P14119 18455733
    131149 3cce:Q (2.75) BS01 rna ? GO:0003735 ... P12734 18455733
    131150 3cce:Q (2.75) BS02 rna ? GO:0003735 ... P12734 18455733
    131151 3cce:R (2.75) BS01 rna ? GO:0002181 ... P10970 18455733
    131152 3cce:S (2.75) BS01 rna ? GO:0003735 ... P12732 18455733
    131153 3cce:T (2.75) BS01 rna ? GO:0003723 ... P10972 18455733
    131154 3cce:T (2.75) BS02 MG ? GO:0003723 ... P10972 18455733
    131155 3cce:U (2.75) BS01 rna ? GO:0003735 ... P14116 18455733
    131156 3cce:V (2.75) BS01 rna ? GO:0003735 ... P10971 18455733
    131157 3cce:W (2.75) BS01 rna ? GO:0000463 ... P14121 18455733
    131158 3cce:W (2.75) BS02 rna ? GO:0000463 ... P14121 18455733
    131159 3cce:X (2.75) BS01 rna ? GO:0002181 ... P18138 18455733
    131160 3cce:Y (2.75) BS01 rna ? GO:0000166 ... P12736 18455733
    131161 3cce:Y (2.75) BS02 MG ? GO:0000166 ... P12736 18455733
    131162 3cce:Z (2.75) BS01 rna ? GO:0003735 ... P60619 18455733
    131163 3ccg:A (1.5) BS01 FE 3.6.1.41 GO:0008803 ... Q97JL1 N/A
    131164 3ccg:A (1.5) BS02 FE 3.6.1.41 GO:0008803 ... Q97JL1 N/A
    131165 3cch:A (2.6) BS01 peptide ? N/A P01899 19789338
    131166 3cch:D (2.6) BS01 peptide ? N/A P01899 19789338
    131167 3cch:G (2.6) BS01 peptide ? N/A P01899 19789338
    131168 3cch:J (2.6) BS01 peptide ? N/A P01899 19789338
    131169 3ccj:1 (3.3) BS01 rna ? GO:0003723 ... P32410 18455733
    131170 3ccj:2 (3.3) BS01 rna ? GO:0003735 ... P22452 18455733
    131171 3ccj:3 (3.3) BS01 rna ? GO:0003735 ... P32411 18455733
    131172 3ccj:A (3.3) BS01 rna ? GO:0002181 ... P20276 18455733
    131173 3ccj:A (3.3) BS02 MG ? GO:0002181 ... P20276 18455733
    131174 3ccj:A (3.3) BS03 MG ? GO:0002181 ... P20276 18455733
    131175 3ccj:B (3.3) BS01 rna ? GO:0003723 ... P20279 18455733
    131176 3ccj:C (3.3) BS01 rna ? GO:0003735 ... P12735 18455733
    131177 3ccj:D (3.3) BS01 rna ? GO:0000049 ... P14124 18455733
    131178 3ccj:D (3.3) BS02 rna ? GO:0000049 ... P14124 18455733
    131179 3ccj:E (3.3) BS01 rna ? GO:0002181 ... P14135 18455733
    131180 3ccj:F (3.3) BS01 rna ? GO:0001682 ... P12743 18455733
    131181 3ccj:H (3.3) BS01 rna ? GO:0003735 ... P60617 18455733
    131182 3ccj:I (3.3) BS01 rna ? GO:0003735 ... P14122 18455733
    131183 3ccj:J (3.3) BS01 rna ? GO:0003729 ... P29198 18455733
    131184 3ccj:K (3.3) BS01 rna ? GO:0003735 ... P22450 18455733
    131185 3ccj:L (3.3) BS01 rna ? GO:0003735 ... P12737 18455733
    131186 3ccj:M (3.3) BS01 rna ? GO:0002181 ... P60618 18455733
    131187 3ccj:N (3.3) BS01 rna ? GO:0000027 ... P14123 18455733
    131188 3ccj:N (3.3) BS02 rna ? GO:0000027 ... P14123 18455733
    131189 3ccj:O (3.3) BS01 rna ? GO:0003723 ... P12733 18455733
    131190 3ccj:P (3.3) BS01 rna ? GO:0003723 ... P14119 18455733
    131191 3ccj:Q (3.3) BS01 rna ? GO:0003735 ... P12734 18455733
    131192 3ccj:Q (3.3) BS02 rna ? GO:0003735 ... P12734 18455733
    131193 3ccj:R (3.3) BS01 rna ? GO:0002181 ... P10970 18455733
    131194 3ccj:S (3.3) BS01 rna ? GO:0003735 ... P12732 18455733
    131195 3ccj:T (3.3) BS01 rna ? GO:0003723 ... P10972 18455733
    131196 3ccj:T (3.3) BS02 MG ? GO:0003723 ... P10972 18455733
    131197 3ccj:U (3.3) BS01 rna ? GO:0003735 ... P14116 18455733
    131198 3ccj:V (3.3) BS01 rna ? GO:0003735 ... P10971 18455733
    131199 3ccj:W (3.3) BS01 rna ? GO:0000463 ... P14121 18455733
    131200 3ccj:W (3.3) BS02 rna ? GO:0000463 ... P14121 18455733

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).