SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    132201 3cl8:B (2.25) BS01 5AC 3.5.2.5 GO:0005975 ... Q3KFK7 18550550
    132202 3cl9:A (3.3) BS01 NAP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132203 3cl9:A (3.3) BS02 MTX 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132204 3cl9:A (3.3) BS03 UMP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132205 3cla:A (1.75) BS01 CO 2.3.1.28 GO:0008811 ... P00484 2187098
    132206 3cla:A (1.75) BS02 CLM 2.3.1.28 GO:0008811 ... P00484 2187098 MOAD: Kd=13uM
    132207 3clb:A (3.0) BS01 NAP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132208 3clb:A (3.0) BS02 TMQ 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132209 3clb:B (3.0) BS01 NAP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132210 3clb:B (3.0) BS02 TMQ 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132211 3clb:C (3.0) BS01 NAP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132212 3clb:C (3.0) BS02 TMQ 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132213 3clb:D (3.0) BS01 NAP 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132214 3clb:D (3.0) BS02 TMQ 1.5.1.3
    2.1.1.45    		 GO:0004146 ... Q27793 18536013
    132215 3clc:A (2.8) BS01 dna ? GO:0003677 ... Q8GGH0 18644840
    132216 3clc:A (2.8) BS02 dna ? GO:0003677 ... Q8GGH0 18644840
    132217 3clc:B (2.8) BS01 dna ? GO:0003677 ... Q8GGH0 18644840
    132218 3clc:B (2.8) BS02 dna ? GO:0003677 ... Q8GGH0 18644840
    132219 3clc:C (2.8) BS01 dna ? GO:0003677 ... Q8GGH0 18644840
    132220 3clc:C (2.8) BS02 dna ? GO:0003677 ... Q8GGH0 18644840
    132221 3clc:D (2.8) BS01 dna ? GO:0003677 ... Q8GGH0 18644840
    132222 3clc:D (2.8) BS02 dna ? GO:0003677 ... Q8GGH0 18644840
    132223 3cld:A (2.84) BS01 peptide ? N/A P04150 18522385
    132224 3cld:A (2.84) BS02 GW6 ? N/A P04150 18522385 BindingDB: Ki=0.510000nM, IC50=0.0398nM, EC50=0.400000nM
    132225 3cld:B (2.84) BS01 peptide ? N/A P04150 18522385
    132226 3cld:B (2.84) BS02 GW6 ? N/A P04150 18522385 BindingDB: Ki=0.510000nM, IC50=0.0398nM, EC50=0.400000nM
    132227 3clh:A (2.4) BS01 NAD 4.2.3.4 GO:0003856 ... P56081 18503755
    132228 3clh:B (2.4) BS01 NAD 4.2.3.4 GO:0003856 ... P56081 18503755
    132229 3cli:A (1.8) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    132230 3cli:B (1.8) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    132231 3cln:A (2.2) BS01 CA ? GO:0000785 ... P0DP29 3145979
    132232 3cln:A (2.2) BS02 CA ? GO:0000785 ... P0DP29 3145979
    132233 3cln:A (2.2) BS03 CA ? GO:0000785 ... P0DP29 3145979
    132234 3cln:A (2.2) BS04 CA ? GO:0000785 ... P0DP29 3145979
    132235 3clp:A (2.0) BS01 CMP ? GO:0005221 ... Q98GN8 18619611
    132236 3clp:C (2.0) BS01 CMP ? GO:0005221 ... Q98GN8 18619611
    132237 3clr:C (1.9) BS01 AMP ? GO:0009055 ... P53570 18407658
    132238 3clr:C (1.9) BS02 FAD ? GO:0009055 ... P53570 18407658
    132239 3clr:D (1.9) BS01 FAD ? GO:0009055 ... P53571 18407658
    132240 3cls:C (1.65) BS01 AMP ? GO:0009055 ... P53570 18407658
    132241 3cls:C (1.65) BS02 FAD ? GO:0009055 ... P53570 18407658
    132242 3cls:D (1.65) BS01 FAD ? GO:0009055 ... P53571 18407658
    132243 3clt:C (2.0) BS01 AMP ? GO:0009055 ... P53570 18407658
    132244 3clt:C (2.0) BS02 FAD ? GO:0009055 ... P53570 18407658
    132245 3clt:D (2.0) BS01 FAD ? GO:0009055 ... P53571 18407658
    132246 3clu:C (1.8) BS01 AMP ? GO:0009055 ... P53570 18407658
    132247 3clu:C (1.8) BS02 FAD ? GO:0009055 ... P53570 18407658
    132248 3clu:D (1.8) BS01 FAD ? GO:0009055 ... P53571 18407658
    132249 3clv:A (1.89) BS01 GDP 3.6.5.2 GO:0003924 ... O96193 N/A
    132250 3clx:A (2.7) BS01 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132251 3clx:A (2.7) BS02 ZN 2.3.2.27 N/A P98170 18851976
    132252 3clx:A (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132253 3clx:B (2.7) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132254 3clx:B (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132255 3clx:C (2.7) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132256 3clx:C (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132257 3clx:C (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132258 3clx:C (2.7) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132259 3clx:D (2.7) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132260 3clx:D (2.7) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132261 3clx:D (2.7) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132262 3clx:D (2.7) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132263 3clx:D (2.7) BS05 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132264 3cly:A (2.0) BS01 MG 2.7.10.1 GO:0004672 ... P21802 19060208
    132265 3cly:A (2.0) BS02 ACP 2.7.10.1 GO:0004672 ... P21802 19060208
    132266 3clz:A (2.2) BS01 dna 2.3.2.27 N/A Q96T88 18772889
    132267 3clz:A (2.2) BS02 dna 2.3.2.27 N/A Q96T88 18772889
    132268 3clz:A (2.2) BS03 dna 2.3.2.27 N/A Q96T88 18772889
    132269 3clz:A (2.2) BS04 dna 2.3.2.27 N/A Q96T88 18772889
    132270 3clz:B (2.2) BS01 dna 2.3.2.27 N/A Q96T88 18772889
    132271 3clz:B (2.2) BS02 dna 2.3.2.27 N/A Q96T88 18772889
    132272 3clz:B (2.2) BS03 dna 2.3.2.27 N/A Q96T88 18772889
    132273 3clz:C (2.2) BS01 dna 2.3.2.27 N/A Q96T88 18772889
    132274 3clz:C (2.2) BS02 dna 2.3.2.27 N/A Q96T88 18772889
    132275 3clz:D (2.2) BS01 dna 2.3.2.27 N/A Q96T88 18772889
    132276 3clz:D (2.2) BS02 dna 2.3.2.27 N/A Q96T88 18772889
    132277 3cm2:A (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132278 3cm2:A (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132279 3cm2:A (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132280 3cm2:B (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132281 3cm2:B (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132282 3cm2:C (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132283 3cm2:C (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132284 3cm2:C (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132285 3cm2:D (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132286 3cm2:D (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132287 3cm2:E (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132288 3cm2:E (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132289 3cm2:F (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132290 3cm2:F (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132291 3cm2:G (2.5) BS01 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132292 3cm2:G (2.5) BS02 ZN 2.3.2.27 N/A P98170 18851976
    132293 3cm2:G (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132294 3cm2:H (2.5) BS01 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132295 3cm2:H (2.5) BS02 ZN 2.3.2.27 N/A P98170 18851976
    132296 3cm2:H (2.5) BS03 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132297 3cm2:I (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132298 3cm2:I (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132299 3cm2:J (2.5) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132300 3cm2:J (2.5) BS02 X23 2.3.2.27 N/A P98170 18851976 MOAD: Ki=340nM
    BindingDB: IC50=110nM
    132301 3cm5:A (2.81) BS01 ZN 3.1.-.- GO:0000175 ... Q10905 18981218
    132302 3cm5:A (2.81) BS02 MN 3.1.-.- GO:0000175 ... Q10905 18981218
    132303 3cm5:B (2.81) BS01 ZN 3.1.-.- GO:0000175 ... Q10905 18981218
    132304 3cm5:B (2.81) BS02 MN 3.1.-.- GO:0000175 ... Q10905 18981218
    132305 3cm6:A (2.6) BS01 ZN 3.1.-.- GO:0000175 ... Q10905 18981218
    132306 3cm6:A (2.6) BS02 ER3 3.1.-.- GO:0000175 ... Q10905 18981218
    132307 3cm6:B (2.6) BS01 ZN 3.1.-.- GO:0000175 ... Q10905 18981218
    132308 3cm6:B (2.6) BS02 ER3 3.1.-.- GO:0000175 ... Q10905 18981218
    132309 3cm7:A (3.1) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132310 3cm7:A (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132311 3cm7:B (3.1) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132312 3cm7:B (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132313 3cm7:C (3.1) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132314 3cm7:C (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132315 3cm7:C (3.1) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132316 3cm7:C (3.1) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132317 3cm7:D (3.1) BS01 ZN 2.3.2.27 N/A P98170 18851976
    132318 3cm7:D (3.1) BS02 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132319 3cm7:D (3.1) BS03 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132320 3cm7:D (3.1) BS04 X22 2.3.2.27 N/A P98170 18851976 BindingDB: IC50=290nM
    132321 3cm8:A (2.899) BS01 peptide 3.1.-.- GO:0003723 ... Q9EA60 18615018
    132322 3cma:1 (2.8) BS01 rna ? GO:0003723 ... P32410 18818369
    132323 3cma:2 (2.8) BS01 rna ? GO:0003735 ... P22452 18818369
    132324 3cma:3 (2.8) BS01 rna ? GO:0003735 ... P32411 18818369
    132325 3cma:A (2.8) BS01 rna ? GO:0002181 ... P20276 18818369
    132326 3cma:A (2.8) BS02 MG ? GO:0002181 ... P20276 18818369
    132327 3cma:A (2.8) BS03 MG ? GO:0002181 ... P20276 18818369
    132328 3cma:B (2.8) BS01 rna ? GO:0003723 ... P20279 18818369
    132329 3cma:C (2.8) BS01 rna ? GO:0003735 ... P12735 18818369
    132330 3cma:D (2.8) BS01 rna ? GO:0000049 ... P14124 18818369
    132331 3cma:D (2.8) BS02 rna ? GO:0000049 ... P14124 18818369
    132332 3cma:E (2.8) BS01 rna ? GO:0002181 ... P14135 18818369
    132333 3cma:F (2.8) BS01 rna ? GO:0001682 ... P12743 18818369
    132334 3cma:H (2.8) BS01 rna ? GO:0003735 ... P60617 18818369
    132335 3cma:H (2.8) BS02 rna ? GO:0003735 ... P60617 18818369
    132336 3cma:I (2.8) BS01 rna ? GO:0003735 ... P14122 18818369
    132337 3cma:J (2.8) BS01 rna ? GO:0003729 ... P29198 18818369
    132338 3cma:K (2.8) BS01 rna ? GO:0003735 ... P22450 18818369
    132339 3cma:L (2.8) BS01 rna ? GO:0003735 ... P12737 18818369
    132340 3cma:M (2.8) BS01 rna ? GO:0002181 ... P60618 18818369
    132341 3cma:N (2.8) BS01 rna ? GO:0000027 ... P14123 18818369
    132342 3cma:N (2.8) BS02 rna ? GO:0000027 ... P14123 18818369
    132343 3cma:O (2.8) BS01 rna ? GO:0003723 ... P12733 18818369
    132344 3cma:P (2.8) BS01 rna ? GO:0003723 ... P14119 18818369
    132345 3cma:Q (2.8) BS01 rna ? GO:0003735 ... P12734 18818369
    132346 3cma:Q (2.8) BS02 rna ? GO:0003735 ... P12734 18818369
    132347 3cma:R (2.8) BS01 rna ? GO:0002181 ... P10970 18818369
    132348 3cma:S (2.8) BS01 rna ? GO:0003735 ... P12732 18818369
    132349 3cma:T (2.8) BS01 rna ? GO:0003723 ... P10972 18818369
    132350 3cma:T (2.8) BS02 MG ? GO:0003723 ... P10972 18818369
    132351 3cma:U (2.8) BS01 rna ? GO:0003735 ... P14116 18818369
    132352 3cma:V (2.8) BS01 rna ? GO:0003735 ... P10971 18818369
    132353 3cma:W (2.8) BS01 rna ? GO:0000463 ... P14121 18818369
    132354 3cma:W (2.8) BS02 rna ? GO:0000463 ... P14121 18818369
    132355 3cma:X (2.8) BS01 rna ? GO:0002181 ... P18138 18818369
    132356 3cma:Y (2.8) BS01 rna ? GO:0000166 ... P12736 18818369
    132357 3cma:Y (2.8) BS02 MG ? GO:0000166 ... P12736 18818369
    132358 3cma:Z (2.8) BS01 rna ? GO:0003735 ... P60619 18818369
    132359 3cmc:O (1.77) BS01 G3H 1.2.1.12 GO:0004365 ... P00362 18480053
    132360 3cmc:O (1.77) BS02 NAD 1.2.1.12 GO:0004365 ... P00362 18480053
    132361 3cmc:P (1.77) BS01 G3H 1.2.1.12 GO:0004365 ... P00362 18480053
    132362 3cmc:P (1.77) BS02 NAD 1.2.1.12 GO:0004365 ... P00362 18480053
    132363 3cmc:Q (1.77) BS01 G3H 1.2.1.12 GO:0004365 ... P00362 18480053
    132364 3cmc:Q (1.77) BS02 NAD 1.2.1.12 GO:0004365 ... P00362 18480053
    132365 3cmc:R (1.77) BS01 G3H 1.2.1.12 GO:0004365 ... P00362 18480053
    132366 3cmc:R (1.77) BS02 NAD 1.2.1.12 GO:0004365 ... P00362 18480053
    132367 3cmd:A (2.7) BS01 FE 3.5.1.88 GO:0006412 ... Q842S4 18831047
    132368 3cmd:B (2.7) BS01 FE 3.5.1.88 GO:0006412 ... Q842S4 18831047
    132369 3cme:1 (2.95) BS01 rna ? GO:0003723 ... P32410 18818369
    132370 3cme:2 (2.95) BS01 rna ? GO:0003735 ... P22452 18818369
    132371 3cme:3 (2.95) BS01 rna ? GO:0003735 ... P32411 18818369
    132372 3cme:A (2.95) BS01 rna ? GO:0002181 ... P20276 18818369
    132373 3cme:A (2.95) BS02 MG ? GO:0002181 ... P20276 18818369
    132374 3cme:A (2.95) BS03 MG ? GO:0002181 ... P20276 18818369
    132375 3cme:B (2.95) BS01 rna ? GO:0003723 ... P20279 18818369
    132376 3cme:C (2.95) BS01 rna ? GO:0003735 ... P12735 18818369
    132377 3cme:D (2.95) BS01 rna ? GO:0000049 ... P14124 18818369
    132378 3cme:D (2.95) BS02 rna ? GO:0000049 ... P14124 18818369
    132379 3cme:E (2.95) BS01 rna ? GO:0002181 ... P14135 18818369
    132380 3cme:F (2.95) BS01 rna ? GO:0001682 ... P12743 18818369
    132381 3cme:H (2.95) BS01 rna ? GO:0003735 ... P60617 18818369
    132382 3cme:H (2.95) BS02 rna ? GO:0003735 ... P60617 18818369
    132383 3cme:I (2.95) BS01 rna ? GO:0003735 ... P14122 18818369
    132384 3cme:J (2.95) BS01 rna ? GO:0003729 ... P29198 18818369
    132385 3cme:K (2.95) BS01 rna ? GO:0003735 ... P22450 18818369
    132386 3cme:L (2.95) BS01 rna ? GO:0003735 ... P12737 18818369
    132387 3cme:M (2.95) BS01 rna ? GO:0002181 ... P60618 18818369
    132388 3cme:N (2.95) BS01 rna ? GO:0000027 ... P14123 18818369
    132389 3cme:N (2.95) BS02 rna ? GO:0000027 ... P14123 18818369
    132390 3cme:O (2.95) BS01 rna ? GO:0003723 ... P12733 18818369
    132391 3cme:P (2.95) BS01 rna ? GO:0003723 ... P14119 18818369
    132392 3cme:Q (2.95) BS01 rna ? GO:0003735 ... P12734 18818369
    132393 3cme:Q (2.95) BS02 rna ? GO:0003735 ... P12734 18818369
    132394 3cme:R (2.95) BS01 rna ? GO:0002181 ... P10970 18818369
    132395 3cme:S (2.95) BS01 rna ? GO:0003735 ... P12732 18818369
    132396 3cme:T (2.95) BS01 rna ? GO:0003723 ... P10972 18818369
    132397 3cme:T (2.95) BS02 MG ? GO:0003723 ... P10972 18818369
    132398 3cme:U (2.95) BS01 rna ? GO:0003735 ... P14116 18818369
    132399 3cme:V (2.95) BS01 rna ? GO:0003735 ... P10971 18818369
    132400 3cme:W (2.95) BS01 rna ? GO:0000463 ... P14121 18818369
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).