SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13801 1fhf:A (2.8) BS01 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13802 1fhf:A (2.8) BS02 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13803 1fhf:A (2.8) BS03 HEM 1.11.1.7 GO:0004601 ... O22443 11266599
    13804 1fhf:B (2.8) BS01 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13805 1fhf:B (2.8) BS02 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13806 1fhf:B (2.8) BS03 HEM 1.11.1.7 GO:0004601 ... O22443 11266599
    13807 1fhf:C (2.8) BS01 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13808 1fhf:C (2.8) BS02 CA 1.11.1.7 GO:0004601 ... O22443 11266599
    13809 1fhf:C (2.8) BS03 HEM 1.11.1.7 GO:0004601 ... O22443 11266599
    13810 1fhh:A (1.5) BS01 FE ? GO:0005506 ... P00268 11344329
    13811 1fhi:A (3.1) BS01 IB2 2.7.7.51
    3.6.1.29
    3.6.2.1
    3.9.1.-
    GO:0003824 ... P49789 9576908
    13812 1fhj:A (1.8) BS01 HEM ? GO:0004601 ... P60523 14683506
    13813 1fhj:B (1.8) BS01 HEM ? GO:0004601 ... P60526 14683506
    13814 1fhj:C (1.8) BS01 HEM ? GO:0004601 ... P60523 14683506
    13815 1fhj:D (1.8) BS01 HEM ? GO:0004601 ... P60526 14683506
    13816 1fhm:A (1.5) BS01 FE2 ? GO:0005506 ... P00268 11344329
    13817 1fhr:A (-1.00) BS01 peptide 2.7.12.1 N/A P22216 10993733
    13818 1fhv:A (1.77) BS01 MG 4.2.1.113 GO:0000287 ... P29208 10978150
    13819 1fhv:A (1.77) BS02 OSB 4.2.1.113 GO:0000287 ... P29208 10978150
    13820 1fhw:A (1.9) BS01 I5P ? N/A O08967 10983984 MOAD: Kd=0.33uM
    13821 1fhw:B (1.9) BS01 I5P ? N/A O08967 10983984 MOAD: Kd=0.33uM
    13822 1fhx:A (2.5) BS01 4IP ? N/A O08967 10983984 MOAD: Kd=0.027uM
    13823 1fhx:B (2.5) BS01 4IP ? N/A O08967 10983984 MOAD: Kd=0.027uM
    13824 1fi1:A (2.9) BS01 GMH ? GO:0009279 ... P06971 11587645
    13825 1fi1:A (2.9) BS02 RIF ? GO:0009279 ... P06971 11587645
    13826 1fi2:A (1.6) BS01 MN 1.2.3.4 GO:0004784 ... P45850 11062559
    13827 1fi3:A (-1.00) BS01 HEC ? GO:0005506 ... P00101 11371465
    13828 1fi5:A (-1.00) BS01 CA ? GO:0005509 ... P09860 10387077
    13829 1fi5:A (-1.00) BS02 CA ? GO:0005509 ... P09860 10387077
    13830 1fi6:A (-1.00) BS01 CA ? GO:0005509 ... O54916 11389591
    13831 1fi7:A (-1.00) BS01 IMD ? GO:0005515 ... P00004 11472026
    13832 1fi7:A (-1.00) BS02 HEC ? GO:0005515 ... P00004 11472026
    13833 1fi9:A (-1.00) BS01 HEC ? GO:0005515 ... P00004 11472026
    13834 1fib:A (2.1) BS01 CA ? GO:0007596 ... P02679 9016719
    13835 1fic:A (2.5) BS01 CA ? GO:0007596 ... P02679 9016719
    13836 1fic:B (2.5) BS01 CA ? GO:0007596 ... P02679 9016719
    13837 1fid:A (2.1) BS01 CA ? GO:0007596 ... P02679 9016719
    13838 1fif:A (1.95) BS01 CA ? N/A P19999 10931846
    13839 1fif:A (1.95) BS02 CA ? N/A P19999 10931846
    13840 1fif:B (1.95) BS01 CA ? N/A P19999 10931846
    13841 1fif:B (1.95) BS02 CA ? N/A P19999 10931846
    13842 1fif:B (1.95) BS03 CA ? N/A P19999 10931846
    13843 1fif:C (1.95) BS01 CA ? N/A P19999 10931846
    13844 1fif:C (1.95) BS02 CA ? N/A P19999 10931846
    13845 1fig:H (3.0) BS01 TSA N/A N/A N/A 8303271
    13846 1fih:A (1.95) BS01 CA ? N/A P19999 10931846
    13847 1fih:A (1.95) BS02 CA ? N/A P19999 10931846
    13848 1fih:B (1.95) BS01 CA ? N/A P19999 10931846
    13849 1fih:B (1.95) BS02 CA ? N/A P19999 10931846
    13850 1fih:B (1.95) BS03 CA ? N/A P19999 10931846
    13851 1fih:C (1.95) BS01 CA ? N/A P19999 10931846
    13852 1fih:C (1.95) BS02 CA ? N/A P19999 10931846
    13853 1fin:A (2.3) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 7630397
    13854 1fin:C (2.3) BS01 ATP 2.7.11.22 GO:0000082 ... P24941 7630397
    13855 1fio:A (2.1) BS01 ZN ? GO:0016020 ... P32867 11017200
    13856 1fio:A (2.1) BS02 ZN ? GO:0016020 ... P32867 11017200
    13857 1fip:A (1.9) BS01 peptide ? GO:0000786 ... P0A6R3 7961857
    13858 1fip:A (1.9) BS02 peptide ? GO:0000786 ... P0A6R3 7961857
    13859 1fip:B (1.9) BS01 peptide ? GO:0000786 ... P0A6R3 7961857
    13860 1fip:B (1.9) BS02 peptide ? GO:0000786 ... P0A6R3 7961857
    13861 1fiq:A (2.5) BS01 FES 1.17.1.4
    1.17.3.2
    GO:0005506 ... P80457 11005854
    13862 1fiq:A (2.5) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0005506 ... P80457 11005854
    13863 1fiq:A (2.5) BS03 FAD 1.17.1.4
    1.17.3.2
    GO:0005506 ... P80457 11005854
    13864 1fiq:B (2.5) BS01 FAD 1.17.1.4
    1.17.3.2
    GO:0005506 ... P80457 11005854
    13865 1fit:A (1.85) BS01 FRU 2.7.7.51
    3.6.1.29
    3.6.2.1
    3.9.1.-
    GO:0003824 ... P49789 9261067
    13866 1fiu:A (1.6) BS01 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13867 1fiu:A (1.6) BS02 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13868 1fiu:A (1.6) BS03 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13869 1fiu:A (1.6) BS04 MG 3.1.21.4 GO:0009036 ... P31032 10966652
    13870 1fiu:B (1.6) BS01 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13871 1fiu:B (1.6) BS02 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13872 1fiu:B (1.6) BS03 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13873 1fiu:B (1.6) BS04 MG 3.1.21.4 GO:0009036 ... P31032 10966652
    13874 1fiu:C (1.6) BS01 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13875 1fiu:C (1.6) BS02 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13876 1fiu:C (1.6) BS03 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13877 1fiu:C (1.6) BS04 MG 3.1.21.4 GO:0009036 ... P31032 10966652
    13878 1fiu:D (1.6) BS01 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13879 1fiu:D (1.6) BS02 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13880 1fiu:D (1.6) BS03 dna 3.1.21.4 GO:0009036 ... P31032 10966652
    13881 1fiu:D (1.6) BS04 MG 3.1.21.4 GO:0009036 ... P31032 10966652
    13882 1fiv:A (2.0) BS01 peptide 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23
    GO:0004190 ... P16088 7664111
    13883 1fiw:A (2.1) BS01 peptide 3.4.21.10 GO:0004040 ... Q9GL10 11080640
    13884 1fiw:A (2.1) BS02 FUL 3.4.21.10 GO:0004040 ... Q9GL10 11080640
    13885 1fiw:A (2.1) BS03 PBZ 3.4.21.10 GO:0004040 ... Q9GL10 11080640
    13886 1fiw:A (2.1) BS04 PBZ 3.4.21.10 GO:0004040 ... Q9GL10 11080640
    13887 1fiy:A (2.8) BS01 ASP 4.1.1.31 GO:0000287 ... P00864 9927652
    13888 1fiz:A (2.9) BS01 peptide 3.4.21.10 GO:0004252 ... P08001 11080640
    13889 1fiz:A (2.9) BS02 PBZ 3.4.21.10 GO:0004252 ... P08001 11080640
    13890 1fj0:A (1.7) BS01 HEC ? GO:0009055 ... P00091 11742117
    13891 1fj0:B (1.7) BS01 HEC ? GO:0009055 ... P00091 11742117
    13892 1fj0:C (1.7) BS01 HEC ? GO:0009055 ... P00091 11742117
    13893 1fj0:D (1.7) BS01 HEC ? GO:0009055 ... P00091 11742117
    13894 1fj3:A (2.0) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13895 1fj3:A (2.0) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13896 1fj3:A (2.0) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13897 1fj3:A (2.0) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13898 1fj3:A (2.0) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13899 1fj3:A (2.0) BS06 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13900 1fj3:A (2.0) BS07 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13901 1fj4:A (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    13902 1fj4:B (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    13903 1fj4:C (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    13904 1fj4:D (2.35) BS01 TLM 2.3.1.41 GO:0004315 ... P0A953 11050088 MOAD: Kd=26uM
    BindingDB: IC50=12000nM
    13905 1fj6:A (2.5) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 10998248
    13906 1fj6:A (2.5) BS02 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13907 1fj6:A (2.5) BS03 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13908 1fj6:A (2.5) BS04 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13909 1fj6:A (2.5) BS05 PO4 3.1.3.11 GO:0000122 ... P00636 10998248
    13910 1fj6:A (2.5) BS06 PO4 3.1.3.11 GO:0000122 ... P00636 10998248
    13911 1fj8:A (2.27) BS01 CER 2.3.1.41 GO:0004315 ... P0A953 11050088
    13912 1fj8:B (2.27) BS01 CER 2.3.1.41 GO:0004315 ... P0A953 11050088
    13913 1fj8:C (2.27) BS01 CER 2.3.1.41 GO:0004315 ... P0A953 11050088
    13914 1fj8:D (2.27) BS01 CER 2.3.1.41 GO:0004315 ... P0A953 11050088
    13915 1fj8:D (2.27) BS02 CER 2.3.1.41 GO:0004315 ... P0A953 11050088
    13916 1fj9:A (2.5) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 10998248
    13917 1fj9:A (2.5) BS02 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13918 1fj9:A (2.5) BS03 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13919 1fj9:A (2.5) BS04 PO4 3.1.3.11 GO:0000122 ... P00636 10998248
    13920 1fj9:A (2.5) BS05 AMP 3.1.3.11 GO:0000122 ... P00636 10998248 BindingDB: IC50=1300nM
    13921 1fj9:B (2.5) BS01 F6P 3.1.3.11 GO:0000122 ... P00636 10998248
    13922 1fj9:B (2.5) BS02 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13923 1fj9:B (2.5) BS03 ZN 3.1.3.11 GO:0000122 ... P00636 10998248
    13924 1fj9:B (2.5) BS04 PO4 3.1.3.11 GO:0000122 ... P00636 10998248
    13925 1fj9:B (2.5) BS05 AMP 3.1.3.11 GO:0000122 ... P00636 10998248 BindingDB: IC50=1300nM
    13926 1fje:B (-1.00) BS01 rna ? GO:0003676 ... P08199 11118222
    13927 1fjg:B (3.0) BS01 rna ? GO:0003735 ... P80371 11014183
    13928 1fjg:C (3.0) BS01 rna ? GO:0003676 ... P80372 11014183
    13929 1fjg:D (3.0) BS01 rna ? GO:0003723 ... P80373 11014183
    13930 1fjg:D (3.0) BS02 MG ? GO:0003723 ... P80373 11014183
    13931 1fjg:E (3.0) BS01 rna ? GO:0003723 ... Q5SHQ5 11014183
    13932 1fjg:F (3.0) BS01 rna ? GO:0003735 ... Q5SLP8 11014183
    13933 1fjg:G (3.0) BS01 rna ? GO:0000049 ... P17291 11014183
    13934 1fjg:H (3.0) BS01 rna ? GO:0003735 ... P0DOY9 11014183
    13935 1fjg:I (3.0) BS01 rna ? GO:0003723 ... P80374 11014183
    13936 1fjg:J (3.0) BS01 rna ? GO:0000049 ... Q5SHN7 11014183
    13937 1fjg:K (3.0) BS01 rna ? GO:0003735 ... P80376 11014183
    13938 1fjg:L (3.0) BS01 rna ? GO:0000049 ... Q5SHN3 11014183
    13939 1fjg:L (3.0) BS02 SRY ? GO:0000049 ... Q5SHN3 11014183
    13940 1fjg:M (3.0) BS01 rna ? GO:0000049 ... P80377 11014183
    13941 1fjg:N (3.0) BS01 rna ? GO:0003735 ... P0DOY6 11014183
    13942 1fjg:N (3.0) BS02 ZN ? GO:0003735 ... P0DOY6 11014183
    13943 1fjg:O (3.0) BS01 rna ? GO:0003735 ... Q5SJ76 11014183
    13944 1fjg:P (3.0) BS01 rna ? GO:0003735 ... Q5SJH3 11014183
    13945 1fjg:Q (3.0) BS01 rna ? GO:0003735 ... P0DOY7 11014183
    13946 1fjg:R (3.0) BS01 rna ? GO:0003735 ... Q5SLQ0 11014183
    13947 1fjg:S (3.0) BS01 rna ? GO:0000028 ... Q5SHP2 11014183
    13948 1fjg:T (3.0) BS01 rna ? GO:0003723 ... P80380 11014183
    13949 1fjl:A (2.0) BS01 dna ? GO:0000981 ... P06601 7671301
    13950 1fjl:A (2.0) BS02 dna ? GO:0000981 ... P06601 7671301
    13951 1fjl:B (2.0) BS01 dna ? GO:0000981 ... P06601 7671301
    13952 1fjl:B (2.0) BS02 dna ? GO:0000981 ... P06601 7671301
    13953 1fjl:C (2.0) BS01 dna ? GO:0000981 ... P06601 7671301
    13954 1fjm:A (2.1) BS01 peptide 3.1.3.16 GO:0000164 ... P62139 7651533
    13955 1fjm:A (2.1) BS02 MN 3.1.3.16 GO:0000164 ... P62139 7651533
    13956 1fjm:A (2.1) BS03 MN 3.1.3.16 GO:0000164 ... P62139 7651533
    13957 1fjm:B (2.1) BS01 peptide 3.1.3.16 GO:0000164 ... P62139 7651533
    13958 1fjm:B (2.1) BS02 MN 3.1.3.16 GO:0000164 ... P62139 7651533
    13959 1fjm:B (2.1) BS03 MN 3.1.3.16 GO:0000164 ... P62139 7651533
    13960 1fjo:A (2.0) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13961 1fjo:A (2.0) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13962 1fjo:A (2.0) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13963 1fjo:A (2.0) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13964 1fjo:A (2.0) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13965 1fjo:A (2.0) BS06 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13966 1fjo:A (2.0) BS07 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13967 1fjo:A (2.0) BS08 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13968 1fjq:A (1.7) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13969 1fjq:A (1.7) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13970 1fjq:A (1.7) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13971 1fjq:A (1.7) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13972 1fjq:A (1.7) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13973 1fjq:A (1.7) BS06 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13974 1fjq:A (1.7) BS07 ACN 3.4.24.27 GO:0004222 ... P00800 11287678
    13975 1fjs:A (1.92) BS01 CA 3.4.21.6 GO:0004252 ... P00742 11027132
    13976 1fjs:A (1.92) BS02 Z34 3.4.21.6 GO:0004252 ... P00742 11027132 MOAD: Ki=0.11nM
    BindingDB: Ki=0.11nM
    13977 1fjt:A (2.2) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13978 1fjt:A (2.2) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13979 1fjt:A (2.2) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13980 1fjt:A (2.2) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13981 1fjt:A (2.2) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13982 1fjt:A (2.2) BS06 VAL 3.4.24.27 GO:0004222 ... P00800 11287678
    13983 1fjt:A (2.2) BS07 LYS 3.4.24.27 GO:0004222 ... P00800 11287678
    13984 1fju:A (2.0) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13985 1fju:A (2.0) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13986 1fju:A (2.0) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13987 1fju:A (2.0) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13988 1fju:A (2.0) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13989 1fjv:A (2.0) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13990 1fjv:A (2.0) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13991 1fjv:A (2.0) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13992 1fjv:A (2.0) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13993 1fjv:A (2.0) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13994 1fjw:A (1.9) BS01 ZN 3.4.24.27 GO:0004222 ... P00800 11287678
    13995 1fjw:A (1.9) BS02 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13996 1fjw:A (1.9) BS03 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13997 1fjw:A (1.9) BS04 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13998 1fjw:A (1.9) BS05 CA 3.4.24.27 GO:0004222 ... P00800 11287678
    13999 1fjw:A (1.9) BS06 IPH 3.4.24.27 GO:0004222 ... P00800 11287678
    14000 1fjw:A (1.9) BS07 IPH 3.4.24.27 GO:0004222 ... P00800 11287678

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).