SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    141201 3flp:D (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141202 3flp:E (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141203 3flp:E (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141204 3flp:F (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141205 3flp:F (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141206 3flp:G (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141207 3flp:G (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141208 3flp:H (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141209 3flp:H (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141210 3flp:I (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141211 3flp:I (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141212 3flp:J (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141213 3flp:J (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141214 3flp:K (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141215 3flp:K (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141216 3flp:L (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141217 3flp:L (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141218 3flp:M (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141219 3flp:M (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141220 3flp:N (2.3) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141221 3flp:N (2.3) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141222 3flq:A (1.9) BS01 891 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=50nM
    141223 3flr:A (3.0) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141224 3flr:A (3.0) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141225 3flr:B (3.0) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141226 3flr:B (3.0) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141227 3fls:A (2.3) BS01 FLS 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=5nM, Kd=1.2nM
    141228 3flt:A (2.7) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141229 3flt:A (2.7) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141230 3flt:A (2.7) BS03 CA ? GO:0005576 ... Q8WQK3 19452596
    141231 3flt:A (2.7) BS04 OPE ? GO:0005576 ... Q8WQK3 19452596
    141232 3flt:B (2.7) BS01 CA ? GO:0005576 ... Q8WQK3 19452596
    141233 3flt:B (2.7) BS02 CA ? GO:0005576 ... Q8WQK3 19452596
    141234 3flt:B (2.7) BS03 CA ? GO:0005576 ... Q8WQK3 19452596
    141235 3flt:B (2.7) BS04 OPE ? GO:0005576 ... Q8WQK3 19452596
    141236 3flv:A (1.7) BS01 COA ? GO:0000062 ... Q5T8D3 N/A
    141237 3flv:B (1.7) BS01 COA ? GO:0000062 ... Q5T8D3 N/A
    141238 3flw:A (2.1) BS01 FLW 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=14nM, Kd=1.3nM
    141239 3fly:A (1.8) BS01 FLY 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=4nM
    141240 3flz:A (2.23) BS01 FLZ 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=106nM
    141241 3fm1:A (1.78) BS01 HEM 1.11.1.16 GO:0000302 ... O94753 N/A
    141242 3fm1:A (1.78) BS02 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141243 3fm1:A (1.78) BS03 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141244 3fm1:A (1.78) BS04 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141245 3fm1:A (1.78) BS05 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141246 3fm1:A (1.78) BS06 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141247 3fm1:A (1.78) BS07 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141248 3fm2:A (1.8) BS01 ZN ? N/A Q3M4Y5 N/A
    141249 3fm2:B (1.8) BS01 ZN ? N/A Q3M4Y5 N/A
    141250 3fm3:A (2.18) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141251 3fm3:A (2.18) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141252 3fm3:B (2.18) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141253 3fm3:B (2.18) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141254 3fm4:A (2.11) BS01 HEM 1.11.1.16 GO:0000302 ... O94753 N/A
    141255 3fm4:A (2.11) BS02 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141256 3fm4:A (2.11) BS03 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141257 3fm4:A (2.11) BS04 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141258 3fm4:A (2.11) BS05 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141259 3fm4:A (2.11) BS06 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141260 3fm4:A (2.11) BS07 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141261 3fm5:C (2.0) BS01 MG ? GO:0003700 ... Q0S6D0 N/A
    141262 3fm6:A (1.13) BS01 HEM 1.11.1.16 GO:0000302 ... O94753 N/A
    141263 3fm6:A (1.13) BS02 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141264 3fm6:A (1.13) BS03 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141265 3fm6:A (1.13) BS04 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141266 3fm6:A (1.13) BS05 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141267 3fm6:A (1.13) BS06 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141268 3fm6:A (1.13) BS07 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141269 3fm6:A (1.13) BS08 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141270 3fm7:A (3.5) BS01 peptide ? GO:0000278 ... Q94524 19759397
    141271 3fm7:A (3.5) BS02 peptide ? GO:0000278 ... Q94524 19759397
    141272 3fm7:B (3.5) BS01 peptide ? GO:0000278 ... Q94524 19759397
    141273 3fm7:B (3.5) BS02 peptide ? GO:0000278 ... Q94524 19759397
    141274 3fm7:E (3.5) BS01 peptide ? GO:0000132 ... Q24117 19759397
    141275 3fm7:E (3.5) BS02 peptide ? GO:0000132 ... Q24117 19759397
    141276 3fm7:F (3.5) BS01 peptide ? GO:0000132 ... Q24117 19759397
    141277 3fm7:F (3.5) BS02 peptide ? GO:0000132 ... Q24117 19759397
    141278 3fm8:C (2.3) BS01 ZN ? GO:0005096 ... O75689 21057110
    141279 3fm8:D (2.3) BS01 ZN ? GO:0005096 ... O75689 21057110
    141280 3fm9:A (2.7) BS01 MG 5.4.2.6 GO:0000287 ... P71447 19154134
    141281 3fma:A (2.5) BS01 peptide ? N/A P32909 N/A
    141282 3fma:B (2.5) BS01 peptide ? N/A P32909 N/A
    141283 3fma:C (2.5) BS01 peptide ? N/A P32909 N/A
    141284 3fma:D (2.5) BS01 peptide ? N/A P32909 N/A
    141285 3fma:E (2.5) BS01 peptide ? N/A P32909 N/A
    141286 3fmd:A (2.0) BS01 IQB 2.7.11.1 GO:0004672 ... Q8TF76 N/A
    141287 3fme:A (2.26) BS01 STU 2.7.12.2 GO:0004672 ... P52564 N/A
    141288 3fmf:A (2.05) BS01 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141289 3fmf:A (2.05) BS02 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141290 3fmf:B (2.05) BS01 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141291 3fmf:B (2.05) BS02 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141292 3fmf:C (2.05) BS01 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141293 3fmf:C (2.05) BS02 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141294 3fmf:D (2.05) BS01 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141295 3fmf:D (2.05) BS02 DSD 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141296 3fmh:A (1.9) BS01 533 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=11nM
    141297 3fmi:A (2.18) BS01 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141298 3fmi:A (2.18) BS02 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141299 3fmi:B (2.18) BS01 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141300 3fmi:B (2.18) BS02 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141301 3fmi:C (2.18) BS01 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141302 3fmi:D (2.18) BS01 KAP 6.3.3.3 GO:0000287 ... P9WPQ5 20565114
    141303 3fmj:A (2.0) BS01 FMJ 2.7.11.24 GO:0000165 ... Q16539 N/A
    141304 3fmk:A (1.7) BS01 FMK 2.7.11.24 GO:0000165 ... Q16539 N/A BindingDB: IC50=2.0nM
    141305 3fml:A (2.1) BS01 FML 2.7.11.24 GO:0000165 ... Q16539 N/A
    141306 3fmm:A (2.0) BS01 XI2 2.7.11.24 GO:0000165 ... Q16539 N/A
    141307 3fmn:A (1.9) BS01 530 2.7.11.24 GO:0000165 ... Q16539 N/A
    141308 3fmo:B (2.51) BS01 ADP 3.6.4.13 GO:0003676 ... Q9UMR2 19208808
    141309 3fmp:B (3.19) BS01 ADP 3.6.4.13 GO:0003676 ... Q9UMR2 19208808
    141310 3fmp:D (3.19) BS01 ADP 3.6.4.13 GO:0003676 ... Q9UMR2 19208808
    141311 3fmq:A (2.5) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141312 3fmq:A (2.5) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141313 3fmq:A (2.5) BS03 FUG 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141314 3fmq:B (2.5) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141315 3fmq:B (2.5) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141316 3fmq:B (2.5) BS03 FUG 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141317 3fmr:A (2.89) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141318 3fmr:A (2.89) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141319 3fmr:A (2.89) BS03 TN4 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141320 3fmr:B (2.89) BS01 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141321 3fmr:B (2.89) BS02 FE 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141322 3fmr:B (2.89) BS03 TN4 3.4.11.18 GO:0004177 ... Q8SR45 19660503
    141323 3fmt:A (2.983) BS01 dna ? GO:0003677 ... P0AFY8 19304745
    141324 3fmt:A (2.983) BS02 dna ? GO:0003677 ... P0AFY8 19304745
    141325 3fmt:B (2.983) BS01 dna ? GO:0003677 ... P0AFY8 19304745
    141326 3fmt:B (2.983) BS02 dna ? GO:0003677 ... P0AFY8 19304745
    141327 3fmt:E (2.983) BS01 dna ? GO:0003677 ... P0AFY8 19304745
    141328 3fmt:E (2.983) BS02 dna ? GO:0003677 ... P0AFY8 19304745
    141329 3fmt:F (2.983) BS01 dna ? GO:0003677 ... P0AFY8 19304745
    141330 3fmt:F (2.983) BS02 dna ? GO:0003677 ... P0AFY8 19304745
    141331 3fmu:A (1.04) BS01 HEM 1.11.1.16 GO:0000302 ... O94753 N/A
    141332 3fmu:A (1.04) BS02 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141333 3fmu:A (1.04) BS03 CA 1.11.1.16 GO:0000302 ... O94753 N/A
    141334 3fmu:A (1.04) BS04 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141335 3fmu:A (1.04) BS05 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141336 3fmu:A (1.04) BS06 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141337 3fmu:A (1.04) BS07 ZN 1.11.1.16 GO:0000302 ... O94753 N/A
    141338 3fmu:A (1.04) BS08 FE 1.11.1.16 GO:0000302 ... O94753 N/A
    141339 3fmw:A (2.89) BS01 FAD ? GO:0016491 ... Q194P4 19364090
    141340 3fmw:B (2.89) BS01 FAD ? GO:0016491 ... Q194P4 19364090
    141341 3fmw:C (2.89) BS01 FAD ? GO:0016491 ... Q194P4 19364090
    141342 3fmx:X (2.95) BS01 NAI 1.1.1.83
    1.1.1.93
    4.1.1.73
    GO:0000287 ... Q51945 N/A
    141343 3fmz:A (2.9) BS01 2T1 ? GO:0001523 ... P02753 19147488 BindingDB: IC50=15nM
    141344 3fmz:B (2.9) BS01 2T1 ? GO:0001523 ... P02753 19147488 BindingDB: IC50=15nM
    141345 3fn0:H (1.8) BS01 peptide N/A N/A N/A 19515770
    141346 3fna:A (2.1) BS01 AMP N/A N/A N/A N/A
    141347 3fna:B (2.1) BS01 AMP N/A N/A N/A N/A
    141348 3fnb:A (2.1178) BS01 MG ? GO:0004252 ... Q8DUZ1 N/A
    141349 3fne:A (1.98) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141350 3fne:A (1.98) BS02 8PC 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=29nM
    141351 3fne:B (1.98) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141352 3fne:B (1.98) BS02 8PC 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=29nM
    141353 3fne:C (1.98) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141354 3fne:C (1.98) BS02 8PC 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=29nM
    141355 3fne:D (1.98) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141356 3fne:D (1.98) BS02 8PC 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=29nM
    141357 3fnf:A (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141358 3fnf:A (2.3) BS02 JPM 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=51nM
    BindingDB: IC50=51nM
    141359 3fnf:B (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141360 3fnf:B (2.3) BS02 JPM 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=51nM
    BindingDB: IC50=51nM
    141361 3fnf:C (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141362 3fnf:C (2.3) BS02 JPM 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=51nM
    BindingDB: IC50=51nM
    141363 3fnf:D (2.3) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141364 3fnf:D (2.3) BS02 JPM 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=51nM
    BindingDB: IC50=51nM
    141365 3fng:A (1.97) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141366 3fng:A (1.97) BS02 JPL 1.3.1.9 GO:0004318 ... P9WGR1 19130456 MOAD: ic50=110nM
    BindingDB: IC50=110nM
    141367 3fnh:A (2.8) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 19130456
    141368 3fnh:A (2.8) BS02 JPJ 1.3.1.9 GO:0004318 ... P9WGR1 19130456 BindingDB: IC50=21nM
    141369 3fnk:B (1.99) BS01 PDO ? GO:0000272 ... Q7WYN3 19501595
    141370 3fnk:C (1.99) BS01 PDO ? GO:0000272 ... Q7WYN3 19501595
    141371 3fnl:A (2.48) BS01 CA 1.11.1.7 GO:0004601 ... A5JUY8 N/A
    141372 3fnl:A (2.48) BS02 HEM 1.11.1.7 GO:0004601 ... A5JUY8 N/A
    141373 3fnl:A (2.48) BS03 SHA 1.11.1.7 GO:0004601 ... A5JUY8 N/A
    141374 3fnm:B (1.7) BS01 AVN 2.3.2.2
    3.4.19.13
    N/A O25743 19256527
    141375 3fnm:D (1.7) BS01 AVN 2.3.2.2
    3.4.19.13
    N/A O25743 19256527
    141376 3fnn:A (2.3) BS01 FAD 2.1.1.148 GO:0004799 ... P40111 N/A
    141377 3fnq:A (1.85) BS01 HPA 2.4.2.1 GO:0003824 ... Q9BMI9 20057051
    141378 3fnq:B (1.85) BS01 HPA 2.4.2.1 GO:0003824 ... Q9BMI9 20057051
    141379 3fnq:C (1.85) BS01 HPA 2.4.2.1 GO:0003824 ... Q9BMI9 20057051
    141380 3fns:A (2.5) BS01 ZN 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141381 3fns:A (2.5) BS02 ZN 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141382 3fns:A (2.5) BS03 ZN 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141383 3fns:B (2.5) BS01 ZN 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141384 3fns:B (2.5) BS02 ZN 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141385 3fnt:A (3.3) BS01 peptide 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141386 3fnu:A (3.0) BS01 006 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141387 3fnu:B (3.0) BS01 006 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141388 3fnu:C (3.0) BS01 006 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141389 3fnu:D (3.0) BS01 006 3.4.23.39 GO:0004190 ... Q8IM15 19285084
    141390 3fnv:A (2.1) BS01 FES ? GO:0010506 ... Q8N5K1 19580816
    141391 3fnv:B (2.1) BS01 FES ? GO:0010506 ... Q8N5K1 19580816
    141392 3fo0:H (2.5) BS01 BZH N/A N/A N/A 19846764
    141393 3fo0:L (2.5) BS01 BZH N/A N/A N/A 19846764
    141394 3fo1:A (2.2) BS01 BZH N/A N/A N/A 19846764
    141395 3fo1:B (2.2) BS01 BZH N/A N/A N/A 19846764
    141396 3fo1:H (2.2) BS01 BZH N/A N/A N/A 19846764
    141397 3fo1:L (2.2) BS01 BZH N/A N/A N/A 19846764
    141398 3fo2:A (2.18) BS01 BZH N/A N/A N/A 19846764
    141399 3fo2:B (2.18) BS01 BZH N/A N/A N/A 19846764
    141400 3fo2:H (2.18) BS01 BZH N/A N/A N/A 19846764

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).