SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    143001 3g6e:M (2.7) BS01 rna ? GO:0002181 ... P60618 19362093
    143002 3g6e:N (2.7) BS01 rna ? GO:0000027 ... P14123 19362093
    143003 3g6e:N (2.7) BS02 rna ? GO:0000027 ... P14123 19362093
    143004 3g6e:O (2.7) BS01 rna ? GO:0003723 ... P12733 19362093
    143005 3g6e:P (2.7) BS01 rna ? GO:0003723 ... P14119 19362093
    143006 3g6e:Q (2.7) BS01 rna ? GO:0003735 ... P12734 19362093
    143007 3g6e:Q (2.7) BS02 rna ? GO:0003735 ... P12734 19362093
    143008 3g6e:R (2.7) BS01 rna ? GO:0002181 ... P10970 19362093
    143009 3g6e:S (2.7) BS01 rna ? GO:0003735 ... P12732 19362093
    143010 3g6e:T (2.7) BS01 rna ? GO:0003723 ... P10972 19362093
    143011 3g6e:T (2.7) BS02 MG ? GO:0003723 ... P10972 19362093
    143012 3g6e:U (2.7) BS01 rna ? GO:0003735 ... P14116 19362093
    143013 3g6e:V (2.7) BS01 rna ? GO:0003735 ... P10971 19362093
    143014 3g6e:W (2.7) BS01 rna ? GO:0000463 ... P14121 19362093
    143015 3g6e:W (2.7) BS02 rna ? GO:0000463 ... P14121 19362093
    143016 3g6e:X (2.7) BS01 rna ? GO:0003735 ... P18138 19362093
    143017 3g6e:Y (2.7) BS01 rna ? GO:0003735 ... P12736 19362093
    143018 3g6e:Y (2.7) BS02 MG ? GO:0003735 ... P12736 19362093
    143019 3g6e:Z (2.7) BS01 rna ? GO:0003735 ... P60619 19362093
    143020 3g6g:A (2.31) BS01 G6G 2.7.10.2 GO:0004672 ... P00523 19276351 MOAD: ic50=2.8nM
    143021 3g6g:B (2.31) BS01 G6G 2.7.10.2 GO:0004672 ... P00523 19276351 MOAD: ic50=2.8nM
    143022 3g6h:B (2.35) BS01 G6H 2.7.10.2 GO:0004672 ... P00523 19276351 MOAD: ic50=4.6nM
    143023 3g6j:A (3.1) BS01 CA ? GO:0004866 ... P01024 19196712
    143024 3g6j:C (3.1) BS01 CA ? GO:0004866 ... P01024 19196712
    143025 3g6k:A (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143026 3g6k:A (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143027 3g6k:B (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143028 3g6k:B (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143029 3g6k:B (1.35) BS03 BGC 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143030 3g6k:C (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143031 3g6k:C (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143032 3g6k:D (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143033 3g6k:D (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143034 3g6k:E (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143035 3g6k:E (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143036 3g6k:F (1.35) BS01 POP 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143037 3g6k:F (1.35) BS02 FAD 2.7.7.2 GO:0000287 ... Q6FNA9 19375431
    143038 3g6m:A (1.65) BS01 CFF 3.2.1.14 GO:0004553 ... A9LI60 20829286 MOAD: Ki=19.7mM
    143039 3g6m:A (1.65) BS02 CFF 3.2.1.14 GO:0004553 ... A9LI60 20829286 MOAD: Ki=19.7mM
    143040 3g6n:A (2.5) BS01 peptide 3.5.1.88 GO:0006412 ... Q842S4 19249287
    143041 3g6n:A (2.5) BS02 FE 3.5.1.88 GO:0006412 ... Q842S4 19249287
    143042 3g6n:B (2.5) BS01 peptide 3.5.1.88 GO:0006412 ... Q842S4 19249287
    143043 3g6n:B (2.5) BS02 FE 3.5.1.88 GO:0006412 ... Q842S4 19249287
    143044 3g6o:A (2.85) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 19720999
    143045 3g6o:B (2.85) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 19720999
    143046 3g6p:A (1.985) BS01 dna ? GO:0003700 ... P06536 19372434
    143047 3g6p:A (1.985) BS02 dna ? GO:0003700 ... P06536 19372434
    143048 3g6p:A (1.985) BS03 ZN ? GO:0003700 ... P06536 19372434
    143049 3g6p:A (1.985) BS04 ZN ? GO:0003700 ... P06536 19372434
    143050 3g6p:B (1.985) BS01 dna ? GO:0003700 ... P06536 19372434
    143051 3g6p:B (1.985) BS02 dna ? GO:0003700 ... P06536 19372434
    143052 3g6p:B (1.985) BS03 ZN ? GO:0003700 ... P06536 19372434
    143053 3g6p:B (1.985) BS04 ZN ? GO:0003700 ... P06536 19372434
    143054 3g6q:A (2.26) BS01 dna ? GO:0003700 ... P06536 19372434
    143055 3g6q:A (2.26) BS02 dna ? GO:0003700 ... P06536 19372434
    143056 3g6q:A (2.26) BS03 ZN ? GO:0003700 ... P06536 19372434
    143057 3g6q:A (2.26) BS04 ZN ? GO:0003700 ... P06536 19372434
    143058 3g6q:B (2.26) BS01 dna ? GO:0003700 ... P06536 19372434
    143059 3g6q:B (2.26) BS02 dna ? GO:0003700 ... P06536 19372434
    143060 3g6q:B (2.26) BS03 ZN ? GO:0003700 ... P06536 19372434
    143061 3g6q:B (2.26) BS04 ZN ? GO:0003700 ... P06536 19372434
    143062 3g6r:A (2.3) BS01 dna ? GO:0003700 ... P06536 19372434
    143063 3g6r:A (2.3) BS02 dna ? GO:0003700 ... P06536 19372434
    143064 3g6r:A (2.3) BS03 ZN ? GO:0003700 ... P06536 19372434
    143065 3g6r:A (2.3) BS04 ZN ? GO:0003700 ... P06536 19372434
    143066 3g6r:B (2.3) BS01 dna ? GO:0003700 ... P06536 19372434
    143067 3g6r:B (2.3) BS02 dna ? GO:0003700 ... P06536 19372434
    143068 3g6r:B (2.3) BS03 ZN ? GO:0003700 ... P06536 19372434
    143069 3g6r:B (2.3) BS04 ZN ? GO:0003700 ... P06536 19372434
    143070 3g6t:A (1.9) BS01 dna ? GO:0003700 ... P06536 19372434
    143071 3g6t:A (1.9) BS02 dna ? GO:0003700 ... P06536 19372434
    143072 3g6t:A (1.9) BS03 ZN ? GO:0003700 ... P06536 19372434
    143073 3g6t:A (1.9) BS04 ZN ? GO:0003700 ... P06536 19372434
    143074 3g6t:B (1.9) BS01 dna ? GO:0003700 ... P06536 19372434
    143075 3g6t:B (1.9) BS02 dna ? GO:0003700 ... P06536 19372434
    143076 3g6t:B (1.9) BS03 ZN ? GO:0003700 ... P06536 19372434
    143077 3g6t:B (1.9) BS04 ZN ? GO:0003700 ... P06536 19372434
    143078 3g6u:A (1.9) BS01 dna ? GO:0003700 ... P06536 19372434
    143079 3g6u:A (1.9) BS02 dna ? GO:0003700 ... P06536 19372434
    143080 3g6u:A (1.9) BS03 ZN ? GO:0003700 ... P06536 19372434
    143081 3g6u:A (1.9) BS04 ZN ? GO:0003700 ... P06536 19372434
    143082 3g6u:B (1.9) BS01 dna ? GO:0003700 ... P06536 19372434
    143083 3g6u:B (1.9) BS02 dna ? GO:0003700 ... P06536 19372434
    143084 3g6u:B (1.9) BS03 ZN ? GO:0003700 ... P06536 19372434
    143085 3g6u:B (1.9) BS04 ZN ? GO:0003700 ... P06536 19372434
    143086 3g6v:A (2.2) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143087 3g6v:A (2.2) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143088 3g6v:A (2.2) BS03 ATP 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143089 3g6v:A (2.2) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143090 3g6v:A (2.2) BS05 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143091 3g6w:A (2.9) BS01 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143092 3g6w:A (2.9) BS02 PRP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143093 3g6w:A (2.9) BS03 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143094 3g6w:A (2.9) BS04 POP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143095 3g6w:A (2.9) BS05 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143096 3g6w:B (2.9) BS01 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143097 3g6w:B (2.9) BS02 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143098 3g6w:B (2.9) BS03 HSX 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143099 3g6w:B (2.9) BS04 POP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143100 3g6w:B (2.9) BS05 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143101 3g6w:C (2.9) BS01 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143102 3g6w:C (2.9) BS02 HSX 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143103 3g6w:C (2.9) BS03 POP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143104 3g6w:C (2.9) BS04 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143105 3g6w:C (2.9) BS05 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143106 3g6w:D (2.9) BS01 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143107 3g6w:D (2.9) BS02 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143108 3g6w:D (2.9) BS03 GTP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143109 3g6w:D (2.9) BS04 PRP 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143110 3g6w:D (2.9) BS05 HSX 2.4.2.9 GO:0000287 ... Q980Q4 19683539
    143111 3g6x:A (2.08) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143112 3g6x:A (2.08) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143113 3g6x:A (2.08) BS03 DGT 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143114 3g6x:A (2.08) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143115 3g6x:A (2.08) BS05 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143116 3g6y:A (2.1) BS01 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143117 3g6y:A (2.1) BS02 dna 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143118 3g6y:A (2.1) BS03 TTP 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143119 3g6y:A (2.1) BS04 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143120 3g6y:A (2.1) BS05 MG 2.7.7.7 GO:0003684 ... Q9UNA4 19368886
    143121 3g6z:A (2.0) BS01 A7T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.2nM
    BindingDB: IC50=19nM
    143122 3g6z:B (2.0) BS01 A7T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.2nM
    BindingDB: IC50=19nM
    143123 3g70:A (2.0) BS01 A5T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.4nM
    BindingDB: IC50=36nM
    143124 3g70:B (2.0) BS01 A5T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.4nM
    BindingDB: IC50=36nM
    143125 3g71:1 (2.85) BS01 rna ? GO:0003723 ... P32410 19362093
    143126 3g71:2 (2.85) BS01 rna ? GO:0003735 ... P22452 19362093
    143127 3g71:3 (2.85) BS01 rna ? GO:0003735 ... P32411 19362093
    143128 3g71:A (2.85) BS01 rna ? GO:0002181 ... P20276 19362093
    143129 3g71:A (2.85) BS02 MG ? GO:0002181 ... P20276 19362093
    143130 3g71:B (2.85) BS01 rna ? GO:0003723 ... P20279 19362093
    143131 3g71:C (2.85) BS01 rna ? GO:0003735 ... P12735 19362093
    143132 3g71:D (2.85) BS01 rna ? GO:0000049 ... P14124 19362093
    143133 3g71:D (2.85) BS02 rna ? GO:0000049 ... P14124 19362093
    143134 3g71:E (2.85) BS01 rna ? GO:0002181 ... P14135 19362093
    143135 3g71:F (2.85) BS01 rna ? GO:0001682 ... P12743 19362093
    143136 3g71:H (2.85) BS01 rna ? GO:0003735 ... P60617 19362093
    143137 3g71:H (2.85) BS02 rna ? GO:0003735 ... P60617 19362093
    143138 3g71:I (2.85) BS01 rna ? GO:0003735 ... P14122 19362093
    143139 3g71:J (2.85) BS01 rna ? GO:0003729 ... P29198 19362093
    143140 3g71:K (2.85) BS01 rna ? GO:0003735 ... P22450 19362093
    143141 3g71:L (2.85) BS01 rna ? GO:0003735 ... P12737 19362093
    143142 3g71:M (2.85) BS01 rna ? GO:0002181 ... P60618 19362093
    143143 3g71:N (2.85) BS01 rna ? GO:0000027 ... P14123 19362093
    143144 3g71:N (2.85) BS02 rna ? GO:0000027 ... P14123 19362093
    143145 3g71:O (2.85) BS01 rna ? GO:0003723 ... P12733 19362093
    143146 3g71:P (2.85) BS01 rna ? GO:0003723 ... P14119 19362093
    143147 3g71:Q (2.85) BS01 rna ? GO:0003735 ... P12734 19362093
    143148 3g71:Q (2.85) BS02 rna ? GO:0003735 ... P12734 19362093
    143149 3g71:R (2.85) BS01 rna ? GO:0002181 ... P10970 19362093
    143150 3g71:S (2.85) BS01 rna ? GO:0003735 ... P12732 19362093
    143151 3g71:T (2.85) BS01 rna ? GO:0003723 ... P10972 19362093
    143152 3g71:T (2.85) BS02 MG ? GO:0003723 ... P10972 19362093
    143153 3g71:U (2.85) BS01 rna ? GO:0003735 ... P14116 19362093
    143154 3g71:V (2.85) BS01 rna ? GO:0003735 ... P10971 19362093
    143155 3g71:W (2.85) BS01 rna ? GO:0000463 ... P14121 19362093
    143156 3g71:W (2.85) BS02 rna ? GO:0000463 ... P14121 19362093
    143157 3g71:X (2.85) BS01 rna ? GO:0003735 ... P18138 19362093
    143158 3g71:Y (2.85) BS01 rna ? GO:0003735 ... P12736 19362093
    143159 3g71:Y (2.85) BS02 MG ? GO:0003735 ... P12736 19362093
    143160 3g71:Z (2.85) BS01 rna ? GO:0003735 ... P60619 19362093
    143161 3g72:A (1.9) BS01 A6T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.8nM
    BindingDB: IC50=88nM
    143162 3g72:B (1.9) BS01 A6T 3.4.23.15 GO:0004190 ... P00797 19358611 MOAD: ic50=0.8nM
    BindingDB: IC50=88nM
    143163 3g73:A (2.21) BS01 dna ? GO:0000086 ... Q08050 20360045
    143164 3g73:A (2.21) BS02 dna ? GO:0000086 ... Q08050 20360045
    143165 3g73:A (2.21) BS03 MG ? GO:0000086 ... Q08050 20360045
    143166 3g73:B (2.21) BS01 dna ? GO:0000086 ... Q08050 20360045
    143167 3g73:B (2.21) BS02 dna ? GO:0000086 ... Q08050 20360045
    143168 3g73:B (2.21) BS03 MG ? GO:0000086 ... Q08050 20360045
    143169 3g75:A (2.3) BS01 B48 5.6.2.2 GO:0003677 ... P0A0K8 20356737
    143170 3g75:B (2.3) BS01 B48 5.6.2.2 GO:0003677 ... P0A0K8 20356737
    143171 3g76:A (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143172 3g76:A (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143173 3g76:B (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143174 3g76:B (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143175 3g76:C (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143176 3g76:C (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143177 3g76:D (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143178 3g76:D (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143179 3g76:E (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143180 3g76:E (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143181 3g76:F (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143182 3g76:F (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143183 3g76:G (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143184 3g76:G (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143185 3g76:H (3.0) BS01 ZN 2.3.2.27 N/A P98170 19393243
    143186 3g76:H (3.0) BS02 CZ3 2.3.2.27 N/A P98170 19393243
    143187 3g77:A (1.8) BS01 FE 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 19487291
    143188 3g7b:A (2.3) BS01 B47 5.6.2.2 GO:0003677 ... P0A0K8 20356737
    143189 3g7b:B (2.3) BS01 B47 5.6.2.2 GO:0003677 ... P0A0K8 20356737
    143190 3g7e:A (2.2) BS01 B46 5.6.2.2 GO:0003677 ... C3SLN3 20356737
    143191 3g7f:C (2.5) BS01 HEC ? GO:0005506 ... P07173 19539602
    143192 3g7f:C (2.5) BS02 HEC ? GO:0005506 ... P07173 19539602
    143193 3g7f:C (2.5) BS03 HEC ? GO:0005506 ... P07173 19539602
    143194 3g7f:C (2.5) BS04 HEC ? GO:0005506 ... P07173 19539602
    143195 3g7f:L (2.5) BS01 BCB ? GO:0009772 ... P06009 19539602
    143196 3g7f:L (2.5) BS02 BCB ? GO:0009772 ... P06009 19539602
    143197 3g7f:L (2.5) BS03 BPB ? GO:0009772 ... P06009 19539602
    143198 3g7f:L (2.5) BS04 UQ1 ? GO:0009772 ... P06009 19539602
    143199 3g7f:L (2.5) BS05 FE2 ? GO:0009772 ... P06009 19539602
    143200 3g7f:L (2.5) BS06 MQ9 ? GO:0009772 ... P06009 19539602

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).