SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14201 1fo3:A (1.75) BS01 KIF 3.2.1.113 GO:0004571 ... Q9UKM7 10995765 MOAD: ic50=0.2uM
    14202 1fo4:A (2.1) BS01 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14203 1fo4:A (2.1) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14204 1fo4:A (2.1) BS03 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14205 1fo4:A (2.1) BS04 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14206 1fo4:B (2.1) BS01 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14207 1fo4:B (2.1) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14208 1fo4:B (2.1) BS03 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14209 1fo4:B (2.1) BS04 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 11005854
    14210 1foa:A (1.8) BS01 UD1 2.4.1.101 GO:0008375 ... P27115 11032794
    14211 1foc:A (3.0) BS01 HEC ? GO:0009055 ... Q5SME3 11069913
    14212 1foc:B (3.0) BS01 HEC ? GO:0009055 ... Q5SME3 11069913
    14213 1fof:A (2.0) BS01 CO 3.5.2.6 GO:0005886 ... P14489 11017203
    14214 1fof:B (2.0) BS01 CO 3.5.2.6 GO:0005886 ... P14489 11017203
    14215 1foh:A (2.4) BS01 FAD 1.14.13.7 GO:0016491 ... P15245 9634698
    14216 1foh:A (2.4) BS02 IPH 1.14.13.7 GO:0016491 ... P15245 9634698
    14217 1foh:B (2.4) BS01 FAD 1.14.13.7 GO:0016491 ... P15245 9634698
    14218 1foh:B (2.4) BS02 IPH 1.14.13.7 GO:0016491 ... P15245 9634698
    14219 1foh:C (2.4) BS01 FAD 1.14.13.7 GO:0016491 ... P15245 9634698
    14220 1foh:C (2.4) BS02 IPH 1.14.13.7 GO:0016491 ... P15245 9634698
    14221 1foh:D (2.4) BS01 FAD 1.14.13.7 GO:0016491 ... P15245 9634698
    14222 1foh:D (2.4) BS02 IPH 1.14.13.7 GO:0016491 ... P15245 9634698
    14223 1foi:A (1.93) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14224 1foi:A (1.93) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14225 1foi:A (1.93) BS03 14W 1.14.13.39 GO:0004517 ... P29473 11331003
    14226 1foi:B (1.93) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14227 1foi:B (1.93) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14228 1foi:B (1.93) BS03 14W 1.14.13.39 GO:0004517 ... P29473 11331003
    14229 1foj:A (2.1) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11695891
    14230 1foj:A (2.1) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11695891
    14231 1foj:A (2.1) BS03 7NI 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=35000nM
    14232 1foj:A (2.1) BS04 7I2 1.14.13.39 GO:0004517 ... P29473 11695891
    14233 1foj:A (2.1) BS05 7I2 1.14.13.39 GO:0004517 ... P29473 11695891
    14234 1foj:B (2.1) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11695891
    14235 1foj:B (2.1) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11695891
    14236 1foj:B (2.1) BS03 7NI 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=35000nM
    14237 1foj:B (2.1) BS04 7I2 1.14.13.39 GO:0004517 ... P29473 11695891
    14238 1foj:B (2.1) BS05 7I2 1.14.13.39 GO:0004517 ... P29473 11695891
    14239 1fok:A (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P14870 9214510
    14240 1fok:A (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P14870 9214510
    14241 1fol:A (2.2) BS01 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14242 1fol:A (2.2) BS02 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14243 1fol:B (2.2) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14244 1fol:B (2.2) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14245 1fol:B (2.2) BS03 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14246 1foo:A (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14247 1foo:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14248 1foo:A (2.0) BS03 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14249 1foo:B (2.0) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14250 1foo:B (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14251 1foo:B (2.0) BS03 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14252 1fop:A (2.3) BS01 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14253 1fop:A (2.3) BS02 H4B 1.14.13.39 GO:0004517 ... P29473 11331003
    14254 1fop:A (2.3) BS03 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14255 1fop:A (2.3) BS04 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14256 1fop:A (2.3) BS05 H4B 1.14.13.39 GO:0004517 ... P29473 11331003
    14257 1fop:B (2.3) BS01 H4B 1.14.13.39 GO:0004517 ... P29473 11331003
    14258 1fop:B (2.3) BS02 ZN 1.14.13.39 GO:0004517 ... P29473 11331003
    14259 1fop:B (2.3) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 11331003
    14260 1fop:B (2.3) BS04 H4B 1.14.13.39 GO:0004517 ... P29473 11331003
    14261 1fop:B (2.3) BS05 ARG 1.14.13.39 GO:0004517 ... P29473 11331003
    14262 1fos:E (3.05) BS01 dna ? GO:0003677 ... P01100 7816143
    14263 1fos:E (3.05) BS02 dna ? GO:0003677 ... P01100 7816143
    14264 1fos:F (3.05) BS01 dna ? GO:0003677 ... P05412 7816143
    14265 1fos:G (3.05) BS01 dna ? GO:0003677 ... P01100 7816143
    14266 1fos:H (3.05) BS01 dna ? GO:0003677 ... P05412 7816143
    14267 1fos:H (3.05) BS02 dna ? GO:0003677 ... P05412 7816143
    14268 1fp0:A (-1.00) BS01 ZN 2.3.2.27 N/A Q13263 11226167
    14269 1fp0:A (-1.00) BS02 ZN 2.3.2.27 N/A Q13263 11226167
    14270 1fp1:D (1.82) BS01 SAH 2.1.1.154
    2.1.1.65
    GO:0008168 ... P93324 11224575
    14271 1fp1:D (1.82) BS02 HCC 2.1.1.154
    2.1.1.65
    GO:0008168 ... P93324 11224575
    14272 1fp2:A (1.4) BS01 SAH 2.1.1.150 GO:0008168 ... O24529 11224575
    14273 1fp2:A (1.4) BS02 HMO 2.1.1.150 GO:0008168 ... O24529 11224575
    14274 1fp4:A (2.5) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11327812
    14275 1fp4:A (2.5) BS02 CLP 1.18.6.1 GO:0009399 ... P07328 11327812
    14276 1fp4:B (2.5) BS01 CLP 1.18.6.1 GO:0009399 ... P07329 11327812
    14277 1fp4:B (2.5) BS02 CA 1.18.6.1 GO:0009399 ... P07329 11327812
    14278 1fp4:B (2.5) BS03 CA 1.18.6.1 GO:0009399 ... P07329 11327812
    14279 1fp4:C (2.5) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11327812
    14280 1fp4:C (2.5) BS02 CLP 1.18.6.1 GO:0009399 ... P07328 11327812
    14281 1fp4:D (2.5) BS01 CA 1.18.6.1 GO:0009399 ... P07329 11327812
    14282 1fp4:D (2.5) BS02 CLP 1.18.6.1 GO:0009399 ... P07329 11327812
    14283 1fp4:D (2.5) BS03 CA 1.18.6.1 GO:0009399 ... P07329 11327812
    14284 1fp6:A (2.15) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11101289
    14285 1fp6:A (2.15) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 11101289
    14286 1fp6:B (2.15) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11101289
    14287 1fp6:B (2.15) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 11101289
    14288 1fp6:C (2.15) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11101289
    14289 1fp6:C (2.15) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 11101289
    14290 1fp6:D (2.15) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11101289
    14291 1fp6:D (2.15) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 11101289
    14292 1fp7:A (3.2) BS01 K 6.3.4.3 GO:0004329 ... P21164 11087401
    14293 1fpb:A (2.6) BS01 FDP 3.1.3.11 GO:0000122 ... P00636 1312721
    14294 1fpb:A (2.6) BS02 FDP 3.1.3.11 GO:0000122 ... P00636 1312721
    14295 1fpb:B (2.6) BS01 FDP 3.1.3.11 GO:0000122 ... P00636 1312721
    14296 1fpc:H (2.3) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 15299843
    14297 1fpc:H (2.3) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 15299843
    14298 1fpc:H (2.3) BS03 0ZI 3.4.21.5 GO:0004252 ... P00734 15299843 MOAD: Ki=0.1uM
    14299 1fpd:A (2.1) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14300 1fpd:A (2.1) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14301 1fpd:A (2.1) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14302 1fpd:A (2.1) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14303 1fpd:B (2.1) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14304 1fpd:B (2.1) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14305 1fpd:B (2.1) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14306 1fpd:B (2.1) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14307 1fpe:A (2.2) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14308 1fpe:A (2.2) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14309 1fpe:A (2.2) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14310 1fpe:A (2.2) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14311 1fpe:B (2.2) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14312 1fpe:B (2.2) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14313 1fpe:B (2.2) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14314 1fpe:B (2.2) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14315 1fpf:A (2.1) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14316 1fpf:A (2.1) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14317 1fpf:A (2.1) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14318 1fpf:A (2.1) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14319 1fpf:B (2.1) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14320 1fpf:B (2.1) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14321 1fpf:B (2.1) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14322 1fpf:B (2.1) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14323 1fpg:A (2.3) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14324 1fpg:A (2.3) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14325 1fpg:A (2.3) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14326 1fpg:A (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14327 1fpg:B (2.3) BS01 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14328 1fpg:B (2.3) BS02 MN 3.1.3.11 GO:0000122 ... P00636 7703244
    14329 1fpg:B (2.3) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7703244
    14330 1fpg:B (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7703244 BindingDB: IC50=1300nM
    14331 1fph:H (2.5) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 1587268
    14332 1fph:H (2.5) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 1587268
    14333 1fpi:A (2.3) BS01 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14334 1fpi:A (2.3) BS02 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14335 1fpi:A (2.3) BS03 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14336 1fpi:A (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14337 1fpi:A (2.3) BS05 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14338 1fpi:B (2.3) BS01 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14339 1fpi:B (2.3) BS02 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14340 1fpi:B (2.3) BS03 K 3.1.3.11 GO:0000122 ... P00636 7568043
    14341 1fpi:B (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14342 1fpi:B (2.3) BS05 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14343 1fpj:A (2.2) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14344 1fpj:A (2.2) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14345 1fpj:A (2.2) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14346 1fpj:B (2.2) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14347 1fpj:B (2.2) BS02 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14348 1fpj:B (2.2) BS03 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14349 1fpk:A (3.0) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14350 1fpk:A (3.0) BS02 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14351 1fpk:B (3.0) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14352 1fpk:B (3.0) BS02 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14353 1fpl:A (2.3) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14354 1fpl:A (2.3) BS02 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14355 1fpl:A (2.3) BS03 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14356 1fpl:A (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14357 1fpl:A (2.3) BS05 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14358 1fpl:B (2.3) BS01 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14359 1fpl:B (2.3) BS02 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14360 1fpl:B (2.3) BS03 TL 3.1.3.11 GO:0000122 ... P00636 7568043
    14361 1fpl:B (2.3) BS04 AMP 3.1.3.11 GO:0000122 ... P00636 7568043 BindingDB: IC50=1300nM
    14362 1fpl:B (2.3) BS05 AHG 3.1.3.11 GO:0000122 ... P00636 7568043
    14363 1fpm:A (3.0) BS01 CS 6.3.4.3 GO:0004329 ... P21164 11087401
    14364 1fpm:B (3.0) BS01 CS 6.3.4.3 GO:0004329 ... P21164 11087401
    14365 1fpn:1 (2.6) BS01 peptide 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P04936 10903863
    14366 1fpn:3 (2.6) BS01 peptide 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P04936 10903863
    14367 1fpp:A (2.75) BS01 PO4 2.5.1.58
    2.5.1.59
    GO:0004660 ... Q04631 9609683
    14368 1fpp:B (2.75) BS01 ZN 2.5.1.58 GO:0003824 ... Q02293 9609683
    14369 1fpp:B (2.75) BS02 FPP 2.5.1.58 GO:0003824 ... Q02293 9609683
    14370 1fpq:A (2.0) BS01 SAM 2.1.1.154
    2.1.1.65
    GO:0008168 ... P93324 11224575
    14371 1fpr:A (2.5) BS01 peptide 3.1.3.48 GO:0004725 ... P29350 10660565
    14372 1fpt:H (3.0) BS01 peptide ? N/A P01865 7539711
    14373 1fpt:L (3.0) BS01 peptide N/A N/A N/A 7539711
    14374 1fpu:A (2.4) BS01 PRC 2.7.10.2 GO:0004672 ... P00520 10988075 MOAD: Ki=37nM
    14375 1fpu:B (2.4) BS01 PRC 2.7.10.2 GO:0004672 ... P00520 10988075 MOAD: Ki=37nM
    14376 1fpw:A (-1.00) BS01 CA ? GO:0000139 ... Q06389 11015193
    14377 1fpw:A (-1.00) BS02 CA ? GO:0000139 ... Q06389 11015193
    14378 1fpw:A (-1.00) BS03 CA ? GO:0000139 ... Q06389 11015193
    14379 1fpy:A (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14380 1fpy:A (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14381 1fpy:A (2.89) BS03 ADP 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14382 1fpy:A (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14383 1fpy:B (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14384 1fpy:B (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14385 1fpy:B (2.89) BS03 ADP 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14386 1fpy:B (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14387 1fpy:C (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14388 1fpy:C (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14389 1fpy:C (2.89) BS03 ADP 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14390 1fpy:C (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14391 1fpy:D (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14392 1fpy:D (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14393 1fpy:D (2.89) BS03 ADP 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14394 1fpy:D (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14395 1fpy:E (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14396 1fpy:E (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14397 1fpy:E (2.89) BS03 ADP 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14398 1fpy:E (2.89) BS04 PPQ 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14399 1fpy:F (2.89) BS01 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256
    14400 1fpy:F (2.89) BS02 MN 6.3.1.2 GO:0003824 ... P0A1P6 11329256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).