SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    149201 3i3d:A (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    149202 3i3d:A (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149203 3i3d:A (2.2) BS04 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149204 3i3d:B (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    149205 3i3d:B (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149206 3i3d:B (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149207 3i3d:C (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    149208 3i3d:C (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149209 3i3d:C (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149210 3i3d:D (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    149211 3i3d:D (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    149212 3i3d:D (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149213 3i3d:D (2.2) BS04 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149214 3i3e:A (2.1) BS01 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149215 3i3e:A (2.1) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149216 3i3e:B (2.1) BS01 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149217 3i3e:B (2.1) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149218 3i3e:C (2.1) BS01 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149219 3i3e:C (2.1) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149220 3i3e:D (2.1) BS01 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149221 3i3e:D (2.1) BS02 MG 3.2.1.23 GO:0000287 ... P00722 20921997
    149222 3i3f:A (1.35) BS01 LEA ? N/A N/A N/A
    149223 3i3f:A (1.35) BS02 LEA ? N/A N/A N/A
    149224 3i3f:B (1.35) BS01 LEA ? N/A N/A N/A
    149225 3i3f:B (1.35) BS02 BUA ? N/A N/A N/A
    149226 3i3f:C (1.35) BS01 BUA ? N/A N/A N/A
    149227 3i3f:C (1.35) BS02 LEA ? N/A N/A N/A
    149228 3i3l:A (2.2) BS01 FAD ? GO:0003824 ... Q9AL91 20080101
    149229 3i3m:A (1.5) BS01 dna 1.14.11.33 GO:0005515 ... P05050 19706517
    149230 3i3m:A (1.5) BS02 AKG 1.14.11.33 GO:0005515 ... P05050 19706517
    149231 3i3m:A (1.5) BS03 MN 1.14.11.33 GO:0005515 ... P05050 19706517
    149232 3i3o:A (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149233 3i3o:A (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149234 3i3o:B (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149235 3i3o:B (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149236 3i3o:C (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149237 3i3o:C (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149238 3i3o:D (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149239 3i3o:D (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149240 3i3o:E (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149241 3i3o:E (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149242 3i3o:F (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149243 3i3o:F (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149244 3i3o:H (2.06) BS01 MG ? GO:0008206 ... A0A6L8PL20 N/A
    149245 3i3o:H (2.06) BS02 NAE ? GO:0008206 ... A0A6L8PL20 N/A
    149246 3i3q:A (1.4) BS01 AKG 1.14.11.33 GO:0005515 ... P05050 19706517
    149247 3i3q:A (1.4) BS02 MN 1.14.11.33 GO:0005515 ... P05050 19706517
    149248 3i3q:B (1.4) BS01 AKG 1.14.11.33 GO:0005515 ... P05050 19706517
    149249 3i3q:B (1.4) BS02 MN 1.14.11.33 GO:0005515 ... P05050 19706517
    149250 3i3s:R (1.36) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 19966803
    149251 3i3s:R (1.36) BS02 MG 3.6.5.2 GO:0003924 ... P01112 19966803
    149252 3i3s:R (1.36) BS03 CA 3.6.5.2 GO:0003924 ... P01112 19966803
    149253 3i3s:R (1.36) BS04 MG 3.6.5.2 GO:0003924 ... P01112 19966803
    149254 3i3t:A (2.59) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149255 3i3t:A (2.59) BS02 NEH 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149256 3i3t:C (2.59) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149257 3i3t:C (2.59) BS02 NEH 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149258 3i3t:E (2.59) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149259 3i3t:E (2.59) BS02 NEH 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149260 3i3t:G (2.59) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149261 3i3t:G (2.59) BS02 NEH 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    149262 3i3w:A (2.3) BS01 ZN 5.4.2.10 GO:0000287 ... Q5NII8 N/A
    149263 3i3w:B (2.3) BS01 ZN 5.4.2.10 GO:0000287 ... Q5NII8 N/A
    149264 3i3x:A (2.1) BS01 U22 2.3.1.129 GO:0005829 ... Q8EZA6 19456129
    149265 3i3x:B (2.1) BS01 U22 2.3.1.129 GO:0005829 ... Q8EZA6 19456129
    149266 3i3x:C (2.1) BS01 U22 2.3.1.129 GO:0005829 ... Q8EZA6 19456129
    149267 3i3y:D (2.15) BS01 RIB 2.7.1.15 GO:0004747 ... A6T989 N/A
    149268 3i3z:B (1.6) BS01 peptide ? GO:0005179 ... P01308 20208155
    149269 3i40:B (1.85) BS01 peptide ? GO:0005179 ... P01308 20208155
    149270 3i45:A (1.36) BS01 NIO ? GO:0006865 ... Q2RWX8 N/A
    149271 3i46:A (2.6) BS01 CA ? GO:0003824 ... A7LAI8 N/A
    149272 3i46:B (2.6) BS01 CA ? GO:0003824 ... A7LAI8 N/A
    149273 3i46:B (2.6) BS02 CA ? GO:0003824 ... A7LAI8 N/A
    149274 3i49:A (1.6) BS01 dna 1.14.11.33 GO:0005515 ... P05050 19706517
    149275 3i49:A (1.6) BS02 AKG 1.14.11.33 GO:0005515 ... P05050 19706517
    149276 3i49:A (1.6) BS03 FE2 1.14.11.33 GO:0005515 ... P05050 19706517
    149277 3i4a:A (1.898) BS01 LN5 3.5.3.18 GO:0003073 ... O94760 19663506 BindingDB: Ki=5.2e+4nM, IC50=300000nM
    149278 3i4a:B (1.898) BS01 LN5 3.5.3.18 GO:0003073 ... O94760 19663506 BindingDB: Ki=5.2e+4nM, IC50=300000nM
    149279 3i4b:A (2.3) BS01 Z48 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    BindingDB: Ki=7nM
    149280 3i4b:B (2.3) BS01 Z48 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    BindingDB: Ki=7nM
    149281 3i4c:A (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149282 3i4c:A (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149283 3i4c:B (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149284 3i4c:B (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149285 3i4c:C (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149286 3i4c:C (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149287 3i4c:D (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149288 3i4c:D (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149289 3i4c:E (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149290 3i4c:E (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149291 3i4c:H (2.0) BS01 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149292 3i4c:H (2.0) BS02 ZN 1.1.1.1 GO:0004022 ... P39462 19588068
    149293 3i4d:L (2.01) BS01 BCL ? GO:0009772 ... P0C0Y8 N/A
    149294 3i4d:L (2.01) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    149295 3i4d:L (2.01) BS03 BPH ? GO:0009772 ... P0C0Y8 N/A
    149296 3i4d:L (2.01) BS04 U10 ? GO:0009772 ... P0C0Y8 N/A
    149297 3i4d:L (2.01) BS05 UQ1 ? GO:0009772 ... P0C0Y8 N/A
    149298 3i4d:L (2.01) BS06 BCL ? GO:0009772 ... P0C0Y8 N/A
    149299 3i4d:L (2.01) BS07 BPH ? GO:0009772 ... P0C0Y8 N/A
    149300 3i4d:L (2.01) BS08 FE ? GO:0009772 ... P0C0Y8 N/A
    149301 3i4d:M (2.01) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    149302 3i4d:M (2.01) BS02 BPH ? GO:0009772 ... P0C0Y9 N/A
    149303 3i4d:M (2.01) BS03 U10 ? GO:0009772 ... P0C0Y9 N/A
    149304 3i4d:M (2.01) BS04 UQ1 ? GO:0009772 ... P0C0Y9 N/A
    149305 3i4d:M (2.01) BS05 BCL ? GO:0009772 ... P0C0Y9 N/A
    149306 3i4d:M (2.01) BS06 BCL ? GO:0009772 ... P0C0Y9 N/A
    149307 3i4d:M (2.01) BS07 BPH ? GO:0009772 ... P0C0Y9 N/A
    149308 3i4d:M (2.01) BS08 FE ? GO:0009772 ... P0C0Y9 N/A
    149309 3i4d:M (2.01) BS09 U10 ? GO:0009772 ... P0C0Y9 N/A
    149310 3i4d:M (2.01) BS10 SPO ? GO:0009772 ... P0C0Y9 N/A
    149311 3i4i:A (1.89) BS01 CA 3.2.1.73 GO:0004553 ... Q58WW0 N/A
    149312 3i4i:B (1.89) BS01 CA 3.2.1.73 GO:0004553 ... Q58WW0 N/A
    149313 3i4k:A (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149314 3i4k:B (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149315 3i4k:C (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149316 3i4k:D (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149317 3i4k:E (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149318 3i4k:F (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149319 3i4k:G (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149320 3i4k:H (2.2) BS01 MG 5.5.1.1 GO:0003824 ... Q8NN12 N/A
    149321 3i4l:A (2.4) BS01 ANP 3.1.-.-
    7.1.2.2
    GO:0005524 ... O57728 19944110
    149322 3i4m:A (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P04050 19758983
    149323 3i4m:A (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P04050 19758983
    149324 3i4m:A (3.7) BS03 MG 2.7.7.6 GO:0001172 ... P04050 19758983
    149325 3i4m:A (3.7) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 19758983
    149326 3i4m:A (3.7) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 19758983
    149327 3i4m:B (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P08518 19758983
    149328 3i4m:B (3.7) BS02 dna 2.7.7.6 GO:0001172 ... P08518 19758983
    149329 3i4m:B (3.7) BS03 rna 2.7.7.6 GO:0001172 ... P08518 19758983
    149330 3i4m:B (3.7) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 19758983
    149331 3i4m:C (3.7) BS01 ZN ? GO:0000428 ... P16370 19758983
    149332 3i4m:I (3.7) BS01 ZN ? GO:0001172 ... P27999 19758983
    149333 3i4m:I (3.7) BS02 ZN ? GO:0001172 ... P27999 19758983
    149334 3i4m:J (3.7) BS01 ZN ? GO:0001172 ... P22139 19758983
    149335 3i4m:L (3.7) BS01 ZN ? GO:0001172 ... P40422 19758983
    149336 3i4n:A (3.9) BS01 dna 2.7.7.6 GO:0001172 ... P04050 19758983
    149337 3i4n:A (3.9) BS02 rna 2.7.7.6 GO:0001172 ... P04050 19758983
    149338 3i4n:A (3.9) BS03 MG 2.7.7.6 GO:0001172 ... P04050 19758983
    149339 3i4n:A (3.9) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 19758983
    149340 3i4n:A (3.9) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 19758983
    149341 3i4n:B (3.9) BS01 dna 2.7.7.6 GO:0001172 ... P08518 19758983
    149342 3i4n:B (3.9) BS02 dna 2.7.7.6 GO:0001172 ... P08518 19758983
    149343 3i4n:B (3.9) BS03 rna 2.7.7.6 GO:0001172 ... P08518 19758983
    149344 3i4n:B (3.9) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 19758983
    149345 3i4n:C (3.9) BS01 ZN ? GO:0000428 ... P16370 19758983
    149346 3i4n:I (3.9) BS01 ZN ? GO:0001172 ... P27999 19758983
    149347 3i4n:J (3.9) BS01 ZN ? GO:0001172 ... P22139 19758983
    149348 3i4n:L (3.9) BS01 ZN ? GO:0001172 ... P40422 19758983
    149349 3i4v:A (2.0) BS01 FE 1.13.11.1 GO:0003824 ... P95607 20040374
    149350 3i4v:A (2.0) BS02 3CE 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.7uM
    149351 3i4x:A (2.1) BS01 DST 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149352 3i4x:A (2.1) BS02 TRP 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149353 3i4x:B (2.1) BS01 DST 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149354 3i4x:B (2.1) BS02 TRP 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149355 3i4y:A (1.85) BS01 FE 1.13.11.1 GO:0003824 ... P95607 20040374
    149356 3i4y:A (1.85) BS02 35C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.09uM
    149357 3i4z:A (1.76) BS01 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149358 3i4z:A (1.76) BS02 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149359 3i4z:A (1.76) BS03 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149360 3i4z:A (1.76) BS04 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149361 3i4z:A (1.76) BS05 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149362 3i4z:B (1.76) BS01 BU2 2.5.1.34 GO:0004659 ... Q50EL0 19706516
    149363 3i51:A (1.8) BS01 FE 1.13.11.1 GO:0003824 ... P95607 20040374
    149364 3i51:A (1.8) BS02 45C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.02uM
    149365 3i52:A (2.28) BS01 NAP 1.17.1.3 GO:0016491 ... Q4W2K4 20138891
    149366 3i52:A (2.28) BS02 KXN 1.17.1.3 GO:0016491 ... Q4W2K4 20138891
    149367 3i53:A (2.08) BS01 SAH 2.1.1.303 GO:0003824 ... Q84HC8 19702337
    149368 3i53:B (2.08) BS01 SAH 2.1.1.303 GO:0003824 ... Q84HC8 19702337
    149369 3i54:A (2.2) BS01 CMP ? GO:0003677 ... P9WMH3 19740754
    149370 3i54:B (2.2) BS01 CMP ? GO:0003677 ... P9WMH3 19740754
    149371 3i54:C (2.2) BS01 CMP ? GO:0003677 ... P9WMH3 19740754
    149372 3i54:D (2.2) BS01 CMP ? GO:0003677 ... P9WMH3 19740754
    149373 3i55:1 (3.11) BS01 rna ? GO:0003723 ... P32410 19738021
    149374 3i55:2 (3.11) BS01 rna ? GO:0003735 ... P22452 19738021
    149375 3i55:3 (3.11) BS01 rna ? GO:0003735 ... P32411 19738021
    149376 3i55:3 (3.11) BS02 MYL ? GO:0003735 ... P32411 19738021
    149377 3i55:A (3.11) BS01 rna ? GO:0002181 ... P20276 19738021
    149378 3i55:A (3.11) BS02 MG ? GO:0002181 ... P20276 19738021
    149379 3i55:A (3.11) BS03 MG ? GO:0002181 ... P20276 19738021
    149380 3i55:B (3.11) BS01 rna ? GO:0003723 ... P20279 19738021
    149381 3i55:C (3.11) BS01 rna ? GO:0003735 ... P12735 19738021
    149382 3i55:D (3.11) BS01 rna ? GO:0000049 ... P14124 19738021
    149383 3i55:D (3.11) BS02 rna ? GO:0000049 ... P14124 19738021
    149384 3i55:E (3.11) BS01 rna ? GO:0002181 ... P14135 19738021
    149385 3i55:F (3.11) BS01 rna ? GO:0001682 ... P12743 19738021
    149386 3i55:H (3.11) BS01 rna ? GO:0003735 ... P60617 19738021
    149387 3i55:I (3.11) BS01 rna ? GO:0003735 ... P14122 19738021
    149388 3i55:J (3.11) BS01 rna ? GO:0003729 ... P29198 19738021
    149389 3i55:K (3.11) BS01 rna ? GO:0003735 ... P22450 19738021
    149390 3i55:L (3.11) BS01 rna ? GO:0003735 ... P12737 19738021
    149391 3i55:M (3.11) BS01 rna ? GO:0002181 ... P60618 19738021
    149392 3i55:N (3.11) BS01 rna ? GO:0000027 ... P14123 19738021
    149393 3i55:N (3.11) BS02 rna ? GO:0000027 ... P14123 19738021
    149394 3i55:O (3.11) BS01 rna ? GO:0003723 ... P12733 19738021
    149395 3i55:P (3.11) BS01 rna ? GO:0003723 ... P14119 19738021
    149396 3i55:Q (3.11) BS01 rna ? GO:0003735 ... P12734 19738021
    149397 3i55:Q (3.11) BS02 rna ? GO:0003735 ... P12734 19738021
    149398 3i55:R (3.11) BS01 rna ? GO:0002181 ... P10970 19738021
    149399 3i55:S (3.11) BS01 rna ? GO:0003735 ... P12732 19738021
    149400 3i55:T (3.11) BS01 rna ? GO:0003723 ... P10972 19738021

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).