SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    152601 3j78:89 (6.3) BS01 rna ? GO:0002181 ... P04650 25043550
    152602 3j78:89 (6.3) BS02 rna ? GO:0002181 ... P04650 25043550
    152603 3j78:90 (6.3) BS01 rna ? GO:0000027 ... P0CH08 25043550
    152604 3j78:92 (6.3) BS01 rna ? GO:0002181 ... P0CX27 25043550
    152605 3j78:92 (6.3) BS02 rna ? GO:0002181 ... P0CX27 25043550
    152606 3j78:93 (6.3) BS01 rna ? GO:0002181 ... P0CX25 25043550
    152607 3j78:L1 (6.3) BS01 rna ? GO:0000055 ... P0CX43 25043550
    152608 3j78:L2 (6.3) BS01 rna ? GO:0002181 ... P0CX45 25043550
    152609 3j78:L2 (6.3) BS02 rna ? GO:0002181 ... P0CX45 25043550
    152610 3j78:L3 (6.3) BS01 rna ? GO:0000027 ... P14126 25043550
    152611 3j78:L4 (6.3) BS01 rna ? GO:0002181 ... P10664 25043550
    152612 3j78:L4 (6.3) BS02 rna ? GO:0002181 ... P10664 25043550
    152613 3j78:L5 (6.3) BS01 rna ? GO:0000027 ... P26321 25043550
    152614 3j78:L5 (6.3) BS02 rna ? GO:0000027 ... P26321 25043550
    152615 3j78:L6 (6.3) BS01 rna ? GO:0000027 ... Q02326 25043550
    152616 3j78:L7 (6.3) BS01 rna ? GO:0000463 ... P05737 25043550
    152617 3j78:L7 (6.3) BS02 rna ? GO:0000463 ... P05737 25043550
    152618 3j78:L8 (6.3) BS01 rna ? GO:0000470 ... P17076 25043550
    152619 3j78:L8 (6.3) BS02 rna ? GO:0000470 ... P17076 25043550
    152620 3j78:L9 (6.3) BS01 rna ? GO:0002181 ... P05738 25043550
    152621 3j78:P0 (6.3) BS01 rna ? GO:0000027 ... P05317 25043550
    152622 3j78:RC (6.3) BS01 rna ? GO:0001965 ... P38011 25043550
    152623 3j78:S0 (6.3) BS01 rna ? GO:0000028 ... P32905 25043550
    152624 3j78:S1 (6.3) BS01 rna ? GO:0000462 ... P33442 25043550
    152625 3j78:S2 (6.3) BS01 rna ? GO:0000054 ... P25443 25043550
    152626 3j78:S3 (6.3) BS01 rna ? GO:0000054 ... P05750 25043550
    152627 3j78:S4 (6.3) BS01 rna ? GO:0002181 ... P0CX35 25043550
    152628 3j78:S5 (6.3) BS01 rna ? GO:0000054 ... P26783 25043550
    152629 3j78:S5 (6.3) BS02 rna ? GO:0000054 ... P26783 25043550
    152630 3j78:S5 (6.3) BS03 rna ? GO:0000054 ... P26783 25043550
    152631 3j78:S6 (6.3) BS01 rna ? GO:0000462 ... P0CX37 25043550
    152632 3j78:S7 (6.3) BS01 rna ? GO:0002181 ... P26786 25043550
    152633 3j78:S8 (6.3) BS01 rna ? GO:0000462 ... P0CX39 25043550
    152634 3j78:S8 (6.3) BS02 rna ? GO:0000462 ... P0CX39 25043550
    152635 3j78:S9 (6.3) BS01 rna ? GO:0000462 ... O13516 25043550
    152636 3j79:0 (3.2) BS01 rna ? GO:0002181 ... Q8IEM3 24913268
    152637 3j79:1 (3.2) BS01 rna ? GO:0003735 ... Q8IKM5 24913268
    152638 3j79:2 (3.2) BS01 rna ? GO:0022625 ... Q8IHU0 24913268
    152639 3j79:3 (3.2) BS01 rna ? GO:0000463 ... Q8IIB4 24913268
    152640 3j79:3 (3.2) BS02 rna ? GO:0000463 ... Q8IIB4 24913268
    152641 3j79:4 (3.2) BS01 rna ? GO:0002181 ... C6S3J6 24913268
    152642 3j79:5 (3.2) BS01 rna ? GO:0000463 ... O97250 24913268
    152643 3j79:5 (3.2) BS02 rna ? GO:0000463 ... O97250 24913268
    152644 3j79:6 (3.2) BS01 rna ? GO:0003723 ... Q8IJK8 24913268
    152645 3j79:7 (3.2) BS01 rna ? GO:0002181 ... Q8I463 24913268
    152646 3j79:8 (3.2) BS01 rna ? GO:0003735 ... Q8I3B0 24913268
    152647 3j79:9 (3.2) BS01 rna ? GO:0002181 ... Q8IHT9 24913268
    152648 3j79:D (3.2) BS01 rna ? GO:0002181 ... Q8I3T9 24913268
    152649 3j79:D (3.2) BS02 MG ? GO:0002181 ... Q8I3T9 24913268
    152650 3j79:E (3.2) BS01 rna ? GO:0003723 ... Q8IJC6 24913268
    152651 3j79:F (3.2) BS01 rna ? GO:0003723 ... Q8I431 24913268
    152652 3j79:F (3.2) BS02 rna ? GO:0003723 ... Q8I431 24913268
    152653 3j79:G (3.2) BS01 rna ? GO:0003723 ... Q8IBQ6 24913268
    152654 3j79:G (3.2) BS02 rna ? GO:0003723 ... Q8IBQ6 24913268
    152655 3j79:H (3.2) BS01 rna ? GO:0002181 ... Q8IE85 24913268
    152656 3j79:I (3.2) BS01 rna N/A GO:0003735 ... N/A 24913268
    152657 3j79:J (3.2) BS01 rna ? GO:0000470 ... Q8ILL2 24913268
    152658 3j79:K (3.2) BS01 rna ? GO:0003729 ... Q8IJZ7 24913268
    152659 3j79:L (3.2) BS01 rna ? GO:0003723 ... Q8IAX6 24913268
    152660 3j79:M (3.2) BS01 rna ? GO:0003735 ... Q8IE09 24913268
    152661 3j79:N (3.2) BS01 rna ? GO:0003723 ... Q8ILE8 24913268
    152662 3j79:O (3.2) BS01 rna ? GO:0003735 ... C6KT23 24913268
    152663 3j79:P (3.2) BS01 rna ? GO:0002181 ... C0H4A6 24913268
    152664 3j79:P (3.2) BS02 rna ? GO:0002181 ... C0H4A6 24913268
    152665 3j79:Q (3.2) BS01 rna ? GO:0003735 ... Q8ILV2 24913268
    152666 3j79:Q (3.2) BS02 rna ? GO:0003735 ... Q8ILV2 24913268
    152667 3j79:R (3.2) BS01 rna ? GO:0000027 ... Q8ILL3 24913268
    152668 3j79:R (3.2) BS02 rna ? GO:0000027 ... Q8ILL3 24913268
    152669 3j79:S (3.2) BS01 rna ? GO:0002181 ... C0H5G3 24913268
    152670 3j79:T (3.2) BS01 rna ? GO:0003723 ... C6KSY6 24913268
    152671 3j79:U (3.2) BS01 rna ? GO:0002181 ... Q8IDS6 24913268
    152672 3j79:U (3.2) BS02 rna ? GO:0002181 ... Q8IDS6 24913268
    152673 3j79:V (3.2) BS01 rna ? GO:0003735 ... Q8ILK3 24913268
    152674 3j79:V (3.2) BS02 rna ? GO:0003735 ... Q8ILK3 24913268
    152675 3j79:W (3.2) BS01 rna ? GO:0002181 ... Q8IDI5 24913268
    152676 3j79:W (3.2) BS02 rna ? GO:0002181 ... Q8IDI5 24913268
    152677 3j79:X (3.2) BS01 rna ? GO:0002181 ... Q8IB51 24913268
    152678 3j79:Y (3.2) BS01 rna ? GO:0003735 ... Q8IE82 24913268
    152679 3j79:Y (3.2) BS02 rna ? GO:0003735 ... Q8IE82 24913268
    152680 3j79:Z (3.2) BS01 rna ? GO:0002181 ... O77364 24913268
    152681 3j79:Z (3.2) BS02 rna ? GO:0002181 ... O77364 24913268
    152682 3j79:a (3.2) BS01 rna ? GO:0003735 ... Q8IBY4 24913268
    152683 3j79:a (3.2) BS02 ZN ? GO:0003735 ... Q8IBY4 24913268
    152684 3j79:b (3.2) BS01 rna ? GO:0002181 ... Q8I713 24913268
    152685 3j79:c (3.2) BS01 rna ? GO:0000448 ... C0H4L5 24913268
    152686 3j79:c (3.2) BS02 rna ? GO:0000448 ... C0H4L5 24913268
    152687 3j79:c (3.2) BS03 ZN ? GO:0000448 ... C0H4L5 24913268
    152688 3j79:d (3.2) BS01 rna ? GO:0002181 ... Q8II62 24913268
    152689 3j79:e (3.2) BS01 rna ? GO:0002181 ... C0H4H3 24913268
    152690 3j79:e (3.2) BS02 rna ? GO:0002181 ... C0H4H3 24913268
    152691 3j79:f (3.2) BS01 rna ? GO:0003729 ... Q8ID50 24913268
    152692 3j79:f (3.2) BS02 ZN ? GO:0003729 ... Q8ID50 24913268
    152693 3j79:h (3.2) BS01 rna ? GO:0003735 ... O96184 24913268
    152694 3j79:h (3.2) BS02 ZN ? GO:0003735 ... O96184 24913268
    152695 3j79:i (3.2) BS01 rna ? GO:0002181 ... O97231 24913268
    152696 3j7a:1 (3.2) BS01 rna ? GO:0002181 ... Q8I3R6 24913268
    152697 3j7a:2 (3.2) BS01 rna ? GO:0003735 ... Q8ILN8 24913268
    152698 3j7a:3 (3.2) BS01 rna ? GO:0003729 ... O96258 24913268
    152699 3j7a:4 (3.2) BS01 rna ? GO:0003735 ... Q8IEN2 24913268
    152700 3j7a:5 (3.2) BS01 rna ? GO:0000028 ... Q8IKL9 24913268
    152701 3j7a:6 (3.2) BS01 rna ? GO:0003735 ... O96269 24913268
    152702 3j7a:B (3.2) BS01 rna ? GO:0003735 ... O97313 24913268
    152703 3j7a:C (3.2) BS01 rna ? GO:0000028 ... Q8IJD4 24913268
    152704 3j7a:D (3.2) BS01 rna ? GO:0003723 ... Q8IKH8 24913268
    152705 3j7a:E (3.2) BS01 rna ? GO:0003723 ... Q8I3R0 24913268
    152706 3j7a:F (3.2) BS01 rna ? GO:0003723 ... Q8IIU8 24913268
    152707 3j7a:G (3.2) BS01 rna ? GO:0003723 ... Q8IL02 24913268
    152708 3j7a:H (3.2) BS01 rna ? GO:0003735 ... Q8IDR9 24913268
    152709 3j7a:I (3.2) BS01 rna ? GO:0003723 ... Q8IBN5 24913268
    152710 3j7a:J (3.2) BS01 rna ? GO:0003735 ... Q8IET7 24913268
    152711 3j7a:K (3.2) BS01 rna ? GO:0003735 ... O77395 24913268
    152712 3j7a:L (3.2) BS01 rna ? GO:0002181 ... Q8IM10 24913268
    152713 3j7a:M (3.2) BS01 rna ? GO:0000462 ... Q8IAX5 24913268
    152714 3j7a:N (3.2) BS01 rna ? GO:0003735 ... Q8IK02 24913268
    152715 3j7a:O (3.2) BS01 rna ? GO:0003723 ... Q8IBQ5 24913268
    152716 3j7a:P (3.2) BS01 rna N/A GO:0003735 ... N/A 24913268
    152717 3j7a:Q (3.2) BS01 rna ? GO:0003735 ... O97248 24913268
    152718 3j7a:S (3.2) BS01 rna ? GO:0003676 ... Q8IIA2 24913268
    152719 3j7a:T (3.2) BS01 rna ? GO:0002181 ... C0H4K8 24913268
    152720 3j7a:U (3.2) BS01 rna ? GO:0000462 ... Q8IDB0 24913268
    152721 3j7a:V (3.2) BS01 rna ? GO:0003735 ... O77381 24913268
    152722 3j7a:W (3.2) BS01 rna ? GO:0003735 ... Q8I502 24913268
    152723 3j7a:X (3.2) BS01 rna ? GO:0003723 ... C0H5C2 24913268
    152724 3j7a:Y (3.2) BS01 rna ? GO:0003735 ... Q8IFP2 24913268
    152725 3j7a:Z (3.2) BS01 rna ? GO:0000447 ... Q8IHS5 24913268
    152726 3j7b:A (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 25303172
    152727 3j7b:A (3.2) BS02 NDP 1.11.1.6 GO:0004096 ... P00432 25303172
    152728 3j7b:B (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 25303172
    152729 3j7b:B (3.2) BS02 NDP 1.11.1.6 GO:0004096 ... P00432 25303172
    152730 3j7b:C (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 25303172
    152731 3j7b:C (3.2) BS02 NDP 1.11.1.6 GO:0004096 ... P00432 25303172
    152732 3j7b:D (3.2) BS01 HEM 1.11.1.6 GO:0004096 ... P00432 25303172
    152733 3j7b:D (3.2) BS02 NDP 1.11.1.6 GO:0004096 ... P00432 25303172
    152734 3j7h:A (3.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 25071206
    152735 3j7h:B (3.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 25071206
    152736 3j7h:C (3.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 25071206
    152737 3j7h:D (3.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 25071206
    152738 3j7i:A (8.9) BS01 MG 3.6.5.- GO:0000226 ... P02550 22851320
    152739 3j7i:A (8.9) BS02 GTP 3.6.5.- GO:0000226 ... P02550 22851320
    152740 3j7i:B (8.9) BS01 GTP ? GO:0000226 ... P02554 22851320
    152741 3j7i:B (8.9) BS02 GTP ? GO:0000226 ... P02554 22851320
    152742 3j7o:A (3.4) BS01 rna ? GO:0002181 ... F2Z567 24930395
    152743 3j7o:B (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152744 3j7o:C (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152745 3j7o:C (3.4) BS02 rna N/A GO:0003735 ... N/A 24930395
    152746 3j7o:D (3.4) BS01 rna ? GO:0003735 ... A0A8D0MVZ5 24930395
    152747 3j7o:D (3.4) BS02 rna ? GO:0003735 ... A0A8D0MVZ5 24930395
    152748 3j7o:E (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152749 3j7o:F (3.4) BS01 rna N/A GO:0003723 ... N/A 24930395
    152750 3j7o:F (3.4) BS02 rna N/A GO:0003723 ... N/A 24930395
    152751 3j7o:G (3.4) BS01 rna N/A GO:0003723 ... N/A 24930395
    152752 3j7o:G (3.4) BS02 rna N/A GO:0003723 ... N/A 24930395
    152753 3j7o:H (3.4) BS01 rna ? GO:0002181 ... I3LP78 24930395
    152754 3j7o:I (3.4) BS01 rna N/A GO:0002181 ... Q29195 24930395
    152755 3j7o:I (3.4) BS02 rna N/A GO:0002181 ... Q29195 24930395
    152756 3j7o:J (3.4) BS01 rna ? GO:0003723 ... Q29205 24930395
    152757 3j7o:J (3.4) BS02 rna ? GO:0003723 ... Q29205 24930395
    152758 3j7o:L (3.4) BS01 rna ? GO:0003735 ... I3LSD3 24930395
    152759 3j7o:L (3.4) BS02 rna ? GO:0003735 ... I3LSD3 24930395
    152760 3j7o:M (3.4) BS01 rna ? GO:0003723 ... A1XQU3 24930395
    152761 3j7o:N (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152762 3j7o:N (3.4) BS02 rna N/A GO:0003735 ... N/A 24930395
    152763 3j7o:O (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152764 3j7o:P (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152765 3j7o:P (3.4) BS02 rna N/A GO:0003735 ... N/A 24930395
    152766 3j7o:Q (3.4) BS01 rna ? GO:0002181 ... Q95342 24930395
    152767 3j7o:R (3.4) BS01 rna ? GO:0003723 ... F2Z546 24930395
    152768 3j7o:S (3.4) BS01 rna ? GO:0003735 ... A0A4X1UAP0 24930395
    152769 3j7o:S (3.4) BS02 rna ? GO:0003735 ... A0A4X1UAP0 24930395
    152770 3j7o:T (3.4) BS01 rna ? GO:0001650 ... P49666 24930395
    152771 3j7o:T (3.4) BS02 rna ? GO:0001650 ... P49666 24930395
    152772 3j7o:U (3.4) BS01 rna ? GO:0002181 ... P67985 24930395
    152773 3j7o:V (3.4) BS01 rna ? GO:0000122 ... P62831 24930395
    152774 3j7o:W (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152775 3j7o:X (3.4) BS01 rna ? GO:0003735 ... F2Z522 24930395
    152776 3j7o:X (3.4) BS02 rna ? GO:0003735 ... F2Z522 24930395
    152777 3j7o:Y (3.4) BS01 rna ? GO:0002181 ... I3L7Y1 24930395
    152778 3j7o:Y (3.4) BS02 rna ? GO:0002181 ... I3L7Y1 24930395
    152779 3j7o:Z (3.4) BS01 rna ? GO:0002181 ... A1XQU5 24930395
    152780 3j7o:a (3.4) BS01 rna ? GO:0003735 ... F1RGC0 24930395
    152781 3j7o:b (3.4) BS01 rna ? GO:0002181 ... Q95281 24930395
    152782 3j7o:c (3.4) BS01 rna ? GO:0003723 ... F2Z554 24930395
    152783 3j7o:d (3.4) BS01 rna ? GO:0002181 ... P62901 24930395
    152784 3j7o:e (3.4) BS01 rna ? GO:0002181 ... Q6QAT0 24930395
    152785 3j7o:f (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152786 3j7o:g (3.4) BS01 rna ? GO:0003735 ... Q29223 24930395
    152787 3j7o:h (3.4) BS01 rna ? GO:0000463 ... Q29361 24930395
    152788 3j7o:h (3.4) BS02 rna ? GO:0000463 ... Q29361 24930395
    152789 3j7o:i (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152790 3j7o:j (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395
    152791 3j7o:j (3.4) BS02 rna N/A GO:0003735 ... N/A 24930395
    152792 3j7o:j (3.4) BS03 ZN N/A GO:0003735 ... N/A 24930395
    152793 3j7o:k (3.4) BS01 rna ? GO:0003735 ... A0A4X1VLH7 24930395
    152794 3j7o:l (3.4) BS01 rna ? GO:0002181 ... K7GP63 24930395
    152795 3j7o:l (3.4) BS02 rna ? GO:0002181 ... K7GP63 24930395
    152796 3j7o:m (3.4) BS01 rna ? GO:0003735 ... P63053 24930395
    152797 3j7o:m (3.4) BS02 ZN ? GO:0003735 ... P63053 24930395
    152798 3j7o:o (3.4) BS01 rna ? GO:0002181 ... P83884 24930395
    152799 3j7o:o (3.4) BS02 ZN ? GO:0002181 ... P83884 24930395
    152800 3j7o:p (3.4) BS01 rna N/A GO:0003735 ... N/A 24930395

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).