SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15201 1g0o:D (1.7) BS01 NDP 1.1.1.252 GO:0042438 ... Q12634 11342131
    15202 1g0o:D (1.7) BS02 PYQ 1.1.1.252 GO:0042438 ... Q12634 11342131 MOAD: Ki=14nM
    15203 1g0r:A (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15204 1g0r:B (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15205 1g0r:C (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15206 1g0r:D (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15207 1g0r:E (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15208 1g0r:G (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15209 1g0r:H (1.87) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15210 1g0u:2 (2.4) BS01 MG 3.4.25.1 GO:0004175 ... P38624 11062564
    15211 1g0u:G (2.4) BS01 MG 3.4.99.46 GO:0003674 ... P21243 11062564
    15212 1g0u:G (2.4) BS02 MG 3.4.99.46 GO:0003674 ... P21243 11062564
    15213 1g0u:H (2.4) BS01 MG 3.4.25.1 GO:0004298 ... P25043 11062564
    15214 1g0u:I (2.4) BS01 MG 3.4.99.46 GO:0005515 ... P25451 11062564
    15215 1g0u:K (2.4) BS01 MG 3.4.25.1 GO:0004298 ... P30656 11062564
    15216 1g0u:L (2.4) BS01 MG 3.4.99.46 GO:0003674 ... P23724 11062564
    15217 1g0u:L (2.4) BS02 MG 3.4.99.46 GO:0003674 ... P23724 11062564
    15218 1g0u:N (2.4) BS01 MG 3.4.25.1 GO:0004175 ... P38624 11062564
    15219 1g0u:U (2.4) BS01 MG 3.4.99.46 GO:0003674 ... P21243 11062564
    15220 1g0u:U (2.4) BS02 MG 3.4.99.46 GO:0003674 ... P21243 11062564
    15221 1g0u:V (2.4) BS01 MG 3.4.25.1 GO:0004298 ... P25043 11062564
    15222 1g0u:W (2.4) BS01 MG 3.4.99.46 GO:0005515 ... P25451 11062564
    15223 1g0u:Y (2.4) BS01 MG 3.4.25.1 GO:0004298 ... P30656 11062564
    15224 1g0u:Z (2.4) BS01 MG 3.4.99.46 GO:0003674 ... P23724 11062564
    15225 1g0u:Z (2.4) BS02 MG 3.4.99.46 GO:0003674 ... P23724 11062564
    15226 1g0v:A (2.0) BS01 peptide 3.4.23.25 GO:0000324 ... P07267 11042188
    15227 1g0v:A (2.0) BS02 MAN 3.4.23.25 GO:0000324 ... P07267 11042188
    15228 1g0y:R (3.0) BS01 peptide 3.2.2.6 GO:0004908 ... P14778 10903327
    15229 1g12:A (1.6) BS01 MAN 3.4.24.20 GO:0004222 ... P81054 11223512
    15230 1g12:A (1.6) BS02 ZN 3.4.24.20 GO:0004222 ... P81054 11223512
    15231 1g15:A (1.9) BS01 MN 3.1.26.4 GO:0000287 ... P0A7Y4 11083878
    15232 1g15:A (1.9) BS02 MN 3.1.26.4 GO:0000287 ... P0A7Y4 11083878
    15233 1g16:A (1.8) BS01 CO ? GO:0003924 ... P07560 11099382
    15234 1g16:A (1.8) BS02 GDP ? GO:0003924 ... P07560 11099382
    15235 1g16:B (1.8) BS01 GDP ? GO:0003924 ... P07560 11099382
    15236 1g16:C (1.8) BS01 GDP ? GO:0003924 ... P07560 11099382
    15237 1g16:D (1.8) BS01 CO ? GO:0003924 ... P07560 11099382
    15238 1g16:D (1.8) BS02 GDP ? GO:0003924 ... P07560 11099382
    15239 1g17:A (2.0) BS01 MG ? GO:0003924 ... P07560 11099382
    15240 1g17:A (2.0) BS02 GNP ? GO:0003924 ... P07560 11099382
    15241 1g17:B (2.0) BS01 MG ? GO:0003924 ... P07560 11099382
    15242 1g17:B (2.0) BS02 GNP ? GO:0003924 ... P07560 11099382
    15243 1g18:A (3.8) BS01 ALF 3.1.-.- GO:0003677 ... P9WHJ3 11121488
    15244 1g18:A (3.8) BS02 ADP 3.1.-.- GO:0003677 ... P9WHJ3 11121488
    15245 1g1a:A (2.47) BS01 NAD 4.2.1.46 GO:0008460 ... Q9EU31 11243820
    15246 1g1a:B (2.47) BS01 NAD 4.2.1.46 GO:0008460 ... Q9EU31 11243820
    15247 1g1a:C (2.47) BS01 NAD 4.2.1.46 GO:0008460 ... Q9EU31 11243820
    15248 1g1a:D (2.47) BS01 NAD 4.2.1.46 GO:0008460 ... Q9EU31 11243820
    15249 1g1d:A (2.04) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    15250 1g1d:A (2.04) BS02 FSB 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A MOAD: Kd=0.36nM
    15251 1g1e:B (-1.00) BS01 peptide ? GO:0003714 ... Q60520 11106735
    15252 1g1f:A (2.0) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 11163213
    15253 1g1g:A (2.2) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 11163213
    15254 1g1h:A (2.4) BS01 peptide 3.1.3.48 GO:0004725 ... P18031 11163213
    15255 1g1i:A (2.0) BS01 CA ? N/A P04512 11124032
    15256 1g1j:B (1.86) BS01 SR ? N/A P04512 11124032
    15257 1g1l:A (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15258 1g1l:A (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15259 1g1l:A (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15260 1g1l:B (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15261 1g1l:B (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15262 1g1l:B (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15263 1g1l:C (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15264 1g1l:C (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15265 1g1l:C (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15266 1g1l:D (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15267 1g1l:D (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15268 1g1l:D (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15269 1g1l:E (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15270 1g1l:E (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15271 1g1l:E (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15272 1g1l:F (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15273 1g1l:F (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15274 1g1l:F (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15275 1g1l:G (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15276 1g1l:G (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15277 1g1l:G (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15278 1g1l:H (1.77) BS01 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15279 1g1l:H (1.77) BS02 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15280 1g1l:H (1.77) BS03 DAU 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15281 1g1m:A (2.25) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170381
    15282 1g1m:B (2.25) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170381
    15283 1g1q:A (2.4) BS01 CA ? N/A P16109 11081633
    15284 1g1q:B (2.4) BS01 CA ? N/A P16109 11081633
    15285 1g1q:C (2.4) BS01 CA ? N/A P16109 11081633
    15286 1g1q:D (2.4) BS01 CA ? N/A P16109 11081633
    15287 1g1r:A (3.4) BS01 GAL ? N/A P16109 11081633
    15288 1g1r:A (3.4) BS02 FUC ? N/A P16109 11081633
    15289 1g1r:A (3.4) BS03 CA ? N/A P16109 11081633
    15290 1g1r:B (3.4) BS01 GAL ? N/A P16109 11081633
    15291 1g1r:B (3.4) BS02 SIA ? N/A P16109 11081633
    15292 1g1r:B (3.4) BS03 FUC ? N/A P16109 11081633
    15293 1g1r:B (3.4) BS04 CA ? N/A P16109 11081633
    15294 1g1r:C (3.4) BS01 CA ? N/A P16109 11081633
    15295 1g1r:D (3.4) BS01 GAL ? N/A P16109 11081633
    15296 1g1r:D (3.4) BS02 SIA ? N/A P16109 11081633
    15297 1g1r:D (3.4) BS03 CA ? N/A P16109 11081633
    15298 1g1s:A (1.9) BS01 peptide ? N/A P16109 11081633
    15299 1g1s:A (1.9) BS02 GAL ? N/A P16109 11081633
    15300 1g1s:A (1.9) BS03 SIA ? N/A P16109 11081633
    15301 1g1s:A (1.9) BS04 FUC ? N/A P16109 11081633
    15302 1g1s:B (1.9) BS01 peptide ? N/A P16109 11081633
    15303 1g1s:B (1.9) BS02 GAL ? N/A P16109 11081633
    15304 1g1s:B (1.9) BS03 SIA ? N/A P16109 11081633
    15305 1g1s:B (1.9) BS04 FUC ? N/A P16109 11081633
    15306 1g1t:A (1.5) BS01 GAL ? N/A P16581 11081633
    15307 1g1t:A (1.5) BS02 SIA ? N/A P16581 11081633
    15308 1g1t:A (1.5) BS03 FUC ? N/A P16581 11081633
    15309 1g1t:A (1.5) BS04 CA ? N/A P16581 11081633
    15310 1g1x:A (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 10753109
    15311 1g1x:A (2.6) BS02 rna ? GO:0003735 ... Q5SLP8 10753109
    15312 1g1x:B (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 10753109
    15313 1g1x:B (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 10753109
    15314 1g1x:C (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 10753109
    15315 1g1x:F (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 10753109
    15316 1g1x:F (2.6) BS02 rna ? GO:0003735 ... Q5SLP8 10753109
    15317 1g1x:G (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 10753109
    15318 1g1x:G (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 10753109
    15319 1g1x:H (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 10753109
    15320 1g1x:H (2.6) BS02 rna ? GO:0003735 ... Q5SLQ0 10753109
    15321 1g1y:A (3.0) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15322 1g1y:A (3.0) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15323 1g1y:A (3.0) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15324 1g1y:B (3.0) BS01 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15325 1g1y:B (3.0) BS02 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15326 1g1y:B (3.0) BS03 GLC 3.2.1.135 GO:0004553 ... Q08751 11226882
    15327 1g20:A (2.2) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11170380
    15328 1g20:A (2.2) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 11170380
    15329 1g20:B (2.2) BS01 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15330 1g20:B (2.2) BS02 CLF 1.18.6.1 GO:0009399 ... P07329 11170380
    15331 1g20:B (2.2) BS03 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15332 1g20:C (2.2) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11170380
    15333 1g20:C (2.2) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 11170380
    15334 1g20:D (2.2) BS01 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15335 1g20:D (2.2) BS02 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15336 1g20:D (2.2) BS03 CLF 1.18.6.1 GO:0009399 ... P07329 11170380
    15337 1g20:E (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15338 1g20:F (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15339 1g20:G (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15340 1g20:H (2.2) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15341 1g21:A (3.0) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11170380
    15342 1g21:A (3.0) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 11170380
    15343 1g21:B (3.0) BS01 CLF 1.18.6.1 GO:0009399 ... P07329 11170380
    15344 1g21:B (3.0) BS02 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15345 1g21:B (3.0) BS03 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15346 1g21:C (3.0) BS01 CFM 1.18.6.1 GO:0009399 ... P07328 11170380
    15347 1g21:C (3.0) BS02 CLF 1.18.6.1 GO:0009399 ... P07328 11170380
    15348 1g21:D (3.0) BS01 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15349 1g21:D (3.0) BS02 CA 1.18.6.1 GO:0009399 ... P07329 11170380
    15350 1g21:D (3.0) BS03 CLF 1.18.6.1 GO:0009399 ... P07329 11170380
    15351 1g21:E (3.0) BS01 MG 1.18.6.1 GO:0005524 ... P00459 11170380
    15352 1g21:E (3.0) BS02 ATP 1.18.6.1 GO:0005524 ... P00459 11170380
    15353 1g21:E (3.0) BS03 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15354 1g21:F (3.0) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15355 1g21:F (3.0) BS02 ATP 1.18.6.1 GO:0005524 ... P00459 11170380
    15356 1g21:G (3.0) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15357 1g21:G (3.0) BS02 ATP 1.18.6.1 GO:0005524 ... P00459 11170380
    15358 1g21:G (3.0) BS03 MG 1.18.6.1 GO:0005524 ... P00459 11170380
    15359 1g21:H (3.0) BS01 SF4 1.18.6.1 GO:0005524 ... P00459 11170380
    15360 1g21:H (3.0) BS02 ATP 1.18.6.1 GO:0005524 ... P00459 11170380
    15361 1g21:H (3.0) BS03 ATP 1.18.6.1 GO:0005524 ... P00459 11170380
    15362 1g23:A (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15363 1g23:B (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15364 1g23:C (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15365 1g23:D (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15366 1g23:E (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15367 1g23:F (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15368 1g23:G (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15369 1g23:H (2.8) BS01 G1P 2.7.7.24 GO:0000271 ... Q9HU22 11118200
    15370 1g25:A (-1.00) BS01 ZN ? N/A P51948 11056162
    15371 1g25:A (-1.00) BS02 ZN ? N/A P51948 11056162
    15372 1g27:A (2.1) BS01 BB1 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=7nM
    15373 1g27:B (2.1) BS01 BB1 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=7nM
    15374 1g27:C (2.1) BS01 BB1 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=7nM
    15375 1g28:A (2.73) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 11248020
    15376 1g28:B (2.73) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 11248020
    15377 1g28:C (2.73) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 11248020
    15378 1g28:D (2.73) BS01 FMN 2.7.11.1 N/A Q9ZWQ6 11248020
    15379 1g29:1 (1.9) BS01 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15380 1g29:1 (1.9) BS02 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15381 1g29:1 (1.9) BS03 POP 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15382 1g29:1 (1.9) BS04 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15383 1g29:2 (1.9) BS01 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15384 1g29:2 (1.9) BS02 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15385 1g29:2 (1.9) BS03 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15386 1g29:2 (1.9) BS04 MG 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15387 1g29:2 (1.9) BS05 POP 7.5.2.1 GO:0005524 ... Q9YGA6 11080142
    15388 1g2a:A (1.75) BS01 BB2 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=10nM
    15389 1g2a:B (1.75) BS01 BB2 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=10nM
    15390 1g2a:C (1.75) BS01 BB2 3.5.1.88 GO:0005515 ... P0A6K3 11158755 MOAD: ic50=10nM
    15391 1g2d:C (2.2) BS01 dna ? N/A P08046 11587646
    15392 1g2d:C (2.2) BS02 dna ? N/A P08046 11587646
    15393 1g2d:C (2.2) BS03 ZN ? N/A P08046 11587646
    15394 1g2d:C (2.2) BS04 ZN ? N/A P08046 11587646
    15395 1g2d:C (2.2) BS05 ZN ? N/A P08046 11587646
    15396 1g2d:F (2.2) BS01 dna ? N/A P08046 11587646
    15397 1g2d:F (2.2) BS02 dna ? N/A P08046 11587646
    15398 1g2d:F (2.2) BS03 ZN ? N/A P08046 11587646
    15399 1g2d:F (2.2) BS04 ZN ? N/A P08046 11587646
    15400 1g2d:F (2.2) BS05 ZN ? N/A P08046 11587646

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).