SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    154601 3jas:E (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154602 3jas:F (3.5) BS01 GDP ? GO:0000226 ... P02554 26234155
    154603 3jas:G (3.5) BS01 GDP ? GO:0000226 ... P02554 26234155
    154604 3jas:H (3.5) BS01 GDP ? GO:0000226 ... P02554 26234155
    154605 3jas:I (3.5) BS01 GDP ? GO:0000226 ... P02554 26234155
    154606 3jas:J (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154607 3jas:K (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154608 3jas:L (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154609 3jat:A (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154610 3jat:B (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154611 3jat:C (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154612 3jat:D (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154613 3jat:E (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154614 3jat:F (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154615 3jat:G (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154616 3jat:H (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154617 3jat:I (3.5) BS01 G2P ? GO:0000226 ... P02554 26234155
    154618 3jat:J (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154619 3jat:K (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154620 3jat:L (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154621 3jau:H (4.8) BS01 peptide N/A N/A N/A 26938634
    154622 3jaw:A (3.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154623 3jaw:B (3.9) BS01 GSP ? GO:0000226 ... P02554 26234155
    154624 3jaw:C (3.9) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 26234155
    154625 3jaw:D (3.9) BS01 GSP ? GO:0000226 ... P02554 26234155
    154626 3jay:A (3.0) BS01 SAM ? GO:0000166 ... Q914N6 26240998
    154627 3jay:A (3.0) BS02 SAM ? GO:0000166 ... Q914N6 26240998
    154628 3jay:A (3.0) BS03 ATP ? GO:0000166 ... Q914N6 26240998
    154629 3jay:A (3.0) BS04 GTP ? GO:0000166 ... Q914N6 26240998
    154630 3jb0:A (2.9) BS01 GTP ? GO:0000166 ... Q914N6 26240998
    154631 3jb1:A (3.1) BS01 SAM ? GO:0000166 ... Q914N6 26240998
    154632 3jb2:A (3.1) BS01 SAM ? GO:0000166 ... Q914N6 26240998
    154633 3jb2:A (3.1) BS02 SAM ? GO:0000166 ... Q914N6 26240998
    154634 3jb2:A (3.1) BS03 GTP ? GO:0000166 ... Q914N6 26240998
    154635 3jb2:A (3.1) BS04 GTP ? GO:0000166 ... Q914N6 26240998
    154636 3jb3:A (3.1) BS01 SAM ? GO:0000166 ... Q914N6 26240998
    154637 3jb3:A (3.1) BS02 SAM ? GO:0000166 ... Q914N6 26240998
    154638 3jb3:A (3.1) BS03 ATP ? GO:0000166 ... Q914N6 26240998
    154639 3jb3:A (3.1) BS04 GTP ? GO:0000166 ... Q914N6 26240998
    154640 3jb6:A (3.3) BS01 peptide 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154641 3jb6:A (3.3) BS02 peptide 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154642 3jb6:A (3.3) BS03 GTP 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154643 3jb6:B (3.3) BS01 peptide ? GO:0000166 ... Q9IR43 26503045
    154644 3jb6:B (3.3) BS02 GTP ? GO:0000166 ... Q9IR43 26503045
    154645 3jb7:A (4.0) BS01 peptide 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154646 3jb7:A (4.0) BS02 rna 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154647 3jb7:A (4.0) BS03 rna 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154648 3jb7:A (4.0) BS04 peptide 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154649 3jb7:A (4.0) BS05 GTP 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154650 3jb7:A (4.0) BS06 CTP 2.7.7.48 GO:0000166 ... D0EZK6 26503045
    154651 3jb7:B (4.0) BS01 peptide ? GO:0000166 ... Q9IR43 26503045
    154652 3jb7:B (4.0) BS02 GTP ? GO:0000166 ... Q9IR43 26503045
    154653 3jb9:A (3.6) BS01 rna ? GO:0000386 ... O14187 26292707
    154654 3jb9:A (3.6) BS02 rna ? GO:0000386 ... O14187 26292707
    154655 3jb9:A (3.6) BS03 rna ? GO:0000386 ... O14187 26292707
    154656 3jb9:A (3.6) BS04 rna ? GO:0000386 ... O14187 26292707
    154657 3jb9:B (3.6) BS01 rna ? GO:0000244 ... O94316 26292707
    154658 3jb9:B (3.6) BS02 GDP ? GO:0000244 ... O94316 26292707
    154659 3jb9:D (3.6) BS01 rna ? GO:0000243 ... Q9UUC6 26292707
    154660 3jb9:E (3.6) BS01 rna ? GO:0000395 ... Q10163 26292707
    154661 3jb9:F (3.6) BS01 rna ? GO:0000243 ... O42661 26292707
    154662 3jb9:G (3.6) BS01 rna ? GO:0000387 ... O14036 26292707
    154663 3jb9:H (3.6) BS01 rna ? GO:0000387 ... Q9USZ3 26292707
    154664 3jb9:I (3.6) BS01 rna ? GO:0000395 ... O59734 26292707
    154665 3jb9:J (3.6) BS01 rna ? GO:0000395 ... O74966 26292707
    154666 3jb9:L (3.6) BS01 rna ? GO:0000375 ... O94620 26292707
    154667 3jb9:M (3.6) BS01 rna ? GO:0000398 ... Q09882 26292707
    154668 3jb9:M (3.6) BS02 rna ? GO:0000398 ... Q09882 26292707
    154669 3jb9:R (3.6) BS01 rna ? GO:0000398 ... P87312 26292707
    154670 3jb9:W (3.6) BS01 rna ? GO:0000398 ... P39964 26292707
    154671 3jb9:X (3.6) BS01 ADP ? GO:0000398 ... O94508 26292707
    154672 3jb9:Y (3.6) BS01 rna ? GO:0003676 ... P87126 26292707
    154673 3jb9:Y (3.6) BS02 ZN ? GO:0003676 ... P87126 26292707
    154674 3jb9:Z (3.6) BS01 rna ? GO:0000243 ... Q9UUC6 26292707
    154675 3jb9:a (3.6) BS01 rna ? GO:0003676 ... O59800 26292707
    154676 3jb9:a (3.6) BS02 ZN ? GO:0003676 ... O59800 26292707
    154677 3jb9:a (3.6) BS03 ZN ? GO:0003676 ... O59800 26292707
    154678 3jb9:b (3.6) BS01 rna ? GO:0000395 ... Q10163 26292707
    154679 3jb9:c (3.6) BS01 rna ? GO:0000398 ... Q09909 26292707
    154680 3jb9:c (3.6) BS02 ZN ? GO:0000398 ... Q09909 26292707
    154681 3jb9:e (3.6) BS01 rna ? GO:0000398 ... O74772 26292707
    154682 3jb9:e (3.6) BS02 rna ? GO:0000398 ... O74772 26292707
    154683 3jb9:e (3.6) BS03 ZN ? GO:0000398 ... O74772 26292707
    154684 3jb9:e (3.6) BS04 ZN ? GO:0000398 ... O74772 26292707
    154685 3jb9:e (3.6) BS05 ZN ? GO:0000398 ... O74772 26292707
    154686 3jb9:f (3.6) BS01 rna ? GO:0000243 ... O42661 26292707
    154687 3jb9:g (3.6) BS01 rna ? GO:0000398 ... O43071 26292707
    154688 3jb9:h (3.6) BS01 rna ? GO:0000398 ... P78794 26292707
    154689 3jb9:k (3.6) BS01 rna ? GO:0003676 ... Q7LL14 26292707
    154690 3jb9:l (3.6) BS01 rna ? GO:0000387 ... O14036 26292707
    154691 3jb9:m (3.6) BS01 rna ? GO:0000387 ... Q9USZ3 26292707
    154692 3jb9:n (3.6) BS01 rna ? GO:0000395 ... O59734 26292707
    154693 3jb9:o (3.6) BS01 rna ? GO:0000395 ... O74966 26292707
    154694 3jbb:A (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154695 3jbb:B (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154696 3jbb:B (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154697 3jbb:C (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154698 3jbb:D (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154699 3jbb:D (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154700 3jbb:E (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154701 3jbb:F (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154702 3jbb:F (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154703 3jbb:G (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154704 3jbb:H (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154705 3jbb:H (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154706 3jbb:I (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154707 3jbb:J (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154708 3jbb:J (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154709 3jbb:K (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I959 26514405
    154710 3jbb:L (26.0) BS01 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154711 3jbb:L (26.0) BS02 CYC ? GO:0015979 ... A0A0R4I960 26514405
    154712 3jbi:A (8.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154713 3jbi:A (8.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154714 3jbi:B (8.5) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154715 3jbi:B (8.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154716 3jbj:A (7.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154717 3jbj:A (7.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154718 3jbj:B (7.6) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154719 3jbj:B (7.6) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154720 3jbk:A (8.2) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154721 3jbk:A (8.2) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154722 3jbk:B (8.2) BS01 MG 3.6.4.- GO:0000287 ... P68135 26493222
    154723 3jbk:B (8.2) BS02 ADP 3.6.4.- GO:0000287 ... P68135 26493222
    154724 3jbn:1 (4.7) BS01 rna ? GO:0002181 ... Q8I3R6 26432834
    154725 3jbn:2 (4.7) BS01 rna ? N/A Q8ILN8 26432834
    154726 3jbn:3 (4.7) BS01 rna ? GO:0003735 ... O96258 26432834
    154727 3jbn:4 (4.7) BS01 rna ? GO:0003735 ... Q8IEN2 26432834
    154728 3jbn:5 (4.7) BS01 rna ? GO:0000028 ... Q8IKL9 26432834
    154729 3jbn:6 (4.7) BS01 rna ? GO:0003735 ... O96269 26432834
    154730 3jbn:A0 (4.7) BS01 rna ? GO:0003735 ... Q8IEM3 26432834
    154731 3jbn:A1 (4.7) BS01 rna ? GO:0003735 ... Q8IKM5 26432834
    154732 3jbn:A2 (4.7) BS01 rna ? GO:0022625 ... Q8IHU0 26432834
    154733 3jbn:A3 (4.7) BS01 rna ? GO:0000463 ... Q8IIB4 26432834
    154734 3jbn:A3 (4.7) BS02 rna ? GO:0000463 ... Q8IIB4 26432834
    154735 3jbn:A4 (4.7) BS01 rna ? GO:0002181 ... C6S3J6 26432834
    154736 3jbn:A5 (4.7) BS01 rna ? GO:0003723 ... O97250 26432834
    154737 3jbn:A5 (4.7) BS02 rna ? GO:0003723 ... O97250 26432834
    154738 3jbn:A6 (4.7) BS01 rna ? GO:0003723 ... Q8IJK8 26432834
    154739 3jbn:A7 (4.7) BS01 rna ? GO:0003735 ... Q8I463 26432834
    154740 3jbn:A8 (4.7) BS01 rna ? GO:0003735 ... Q8I3B0 26432834
    154741 3jbn:A9 (4.7) BS01 rna ? GO:0003735 ... Q8IHT9 26432834
    154742 3jbn:AD (4.7) BS01 rna ? GO:0002181 ... Q8I3T9 26432834
    154743 3jbn:AD (4.7) BS02 rna ? GO:0002181 ... Q8I3T9 26432834
    154744 3jbn:AE (4.7) BS01 rna ? GO:0003723 ... Q8IJC6 26432834
    154745 3jbn:AF (4.7) BS01 rna ? GO:0003723 ... Q8I431 26432834
    154746 3jbn:AF (4.7) BS02 rna ? GO:0003723 ... Q8I431 26432834
    154747 3jbn:AG (4.7) BS01 rna ? GO:0003723 ... Q8IBQ6 26432834
    154748 3jbn:AG (4.7) BS02 rna ? GO:0003723 ... Q8IBQ6 26432834
    154749 3jbn:AH (4.7) BS01 rna ? GO:0002181 ... Q8IE85 26432834
    154750 3jbn:AI (4.7) BS01 rna N/A GO:0003735 ... N/A 26432834
    154751 3jbn:AJ (4.7) BS01 rna ? GO:0003723 ... Q8ILL2 26432834
    154752 3jbn:AK (4.7) BS01 rna ? GO:0003729 ... Q8IJZ7 26432834
    154753 3jbn:AL (4.7) BS01 rna ? GO:0003723 ... Q8IAX6 26432834
    154754 3jbn:AL (4.7) BS02 rna ? GO:0003723 ... Q8IAX6 26432834
    154755 3jbn:AM (4.7) BS01 rna ? GO:0003735 ... Q8IE09 26432834
    154756 3jbn:AN (4.7) BS01 rna ? GO:0003723 ... Q8ILE8 26432834
    154757 3jbn:AO (4.7) BS01 rna ? GO:0003735 ... C6KT23 26432834
    154758 3jbn:AP (4.7) BS01 rna ? GO:0002181 ... C0H4A6 26432834
    154759 3jbn:AP (4.7) BS02 rna ? GO:0002181 ... C0H4A6 26432834
    154760 3jbn:AQ (4.7) BS01 rna ? GO:0003735 ... Q8ILV2 26432834
    154761 3jbn:AQ (4.7) BS02 rna ? GO:0003735 ... Q8ILV2 26432834
    154762 3jbn:AR (4.7) BS01 rna ? GO:0000027 ... Q8ILL3 26432834
    154763 3jbn:AR (4.7) BS02 rna ? GO:0000027 ... Q8ILL3 26432834
    154764 3jbn:AS (4.7) BS01 rna ? GO:0002181 ... C0H5G3 26432834
    154765 3jbn:AT (4.7) BS01 rna ? GO:0003723 ... C6KSY6 26432834
    154766 3jbn:AT (4.7) BS02 rna ? GO:0003723 ... C6KSY6 26432834
    154767 3jbn:AU (4.7) BS01 rna ? GO:0002181 ... Q8IDS6 26432834
    154768 3jbn:AU (4.7) BS02 rna ? GO:0002181 ... Q8IDS6 26432834
    154769 3jbn:AV (4.7) BS01 rna ? GO:0003735 ... Q8ILK3 26432834
    154770 3jbn:AV (4.7) BS02 rna ? GO:0003735 ... Q8ILK3 26432834
    154771 3jbn:AW (4.7) BS01 rna ? GO:0003735 ... Q8IDI5 26432834
    154772 3jbn:AW (4.7) BS02 rna ? GO:0003735 ... Q8IDI5 26432834
    154773 3jbn:AX (4.7) BS01 rna ? GO:0003735 ... Q8IB51 26432834
    154774 3jbn:AY (4.7) BS01 rna ? GO:0003735 ... Q8IE82 26432834
    154775 3jbn:AY (4.7) BS02 rna ? GO:0003735 ... Q8IE82 26432834
    154776 3jbn:AZ (4.7) BS01 rna ? GO:0002181 ... O77364 26432834
    154777 3jbn:AZ (4.7) BS02 rna ? GO:0002181 ... O77364 26432834
    154778 3jbn:Aa (4.7) BS01 rna ? GO:0003735 ... Q8IBY4 26432834
    154779 3jbn:Ab (4.7) BS01 rna ? GO:0002181 ... Q8I713 26432834
    154780 3jbn:Ac (4.7) BS01 rna ? GO:0000448 ... C0H4L5 26432834
    154781 3jbn:Ac (4.7) BS02 rna ? GO:0000448 ... C0H4L5 26432834
    154782 3jbn:Ad (4.7) BS01 rna ? GO:0003735 ... Q8II62 26432834
    154783 3jbn:Ae (4.7) BS01 rna ? GO:0002181 ... C0H4H3 26432834
    154784 3jbn:Ae (4.7) BS02 rna ? GO:0002181 ... C0H4H3 26432834
    154785 3jbn:Af (4.7) BS01 rna ? GO:0003735 ... Q8ID50 26432834
    154786 3jbn:Ag (4.7) BS01 rna ? GO:0003700 ... C6S3G4 26432834
    154787 3jbn:Ag (4.7) BS02 rna ? GO:0003700 ... C6S3G4 26432834
    154788 3jbn:Ah (4.7) BS01 rna ? GO:0003735 ... O96184 26432834
    154789 3jbn:Ah (4.7) BS02 rna ? GO:0003735 ... O96184 26432834
    154790 3jbn:Ai (4.7) BS01 rna ? GO:0002181 ... O97231 26432834
    154791 3jbn:B (4.7) BS01 rna ? GO:0003735 ... O97313 26432834
    154792 3jbn:C (4.7) BS01 rna ? GO:0003735 ... Q8IJD4 26432834
    154793 3jbn:D (4.7) BS01 rna ? GO:0003723 ... Q8IKH8 26432834
    154794 3jbn:E (4.7) BS01 rna ? GO:0003723 ... Q8I3R0 26432834
    154795 3jbn:F (4.7) BS01 rna ? GO:0003723 ... Q8IIU8 26432834
    154796 3jbn:G (4.7) BS01 rna ? GO:0003723 ... Q8IL02 26432834
    154797 3jbn:H (4.7) BS01 rna ? GO:0003735 ... Q8IDR9 26432834
    154798 3jbn:I (4.7) BS01 rna ? GO:0003723 ... Q8IBN5 26432834
    154799 3jbn:J (4.7) BS01 rna ? GO:0003735 ... Q8IET7 26432834
    154800 3jbn:K (4.7) BS01 rna ? GO:0003735 ... O77395 26432834

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).