SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16201 1gd1:R (1.8) BS01 NAD 1.2.1.12 GO:0004365 ... P00362 3586018
    16202 1gd2:E (2.0) BS01 dna ? GO:0000976 ... Q01663 11017199
    16203 1gd2:E (2.0) BS02 dna ? GO:0000976 ... Q01663 11017199
    16204 1gd2:F (2.0) BS01 dna ? GO:0000976 ... Q01663 11017199
    16205 1gd2:F (2.0) BS02 dna ? GO:0000976 ... Q01663 11017199
    16206 1gd2:F (2.0) BS03 dna ? GO:0000976 ... Q01663 11017199
    16207 1gd2:G (2.0) BS01 dna ? GO:0000976 ... Q01663 11017199
    16208 1gd2:G (2.0) BS02 dna ? GO:0000976 ... Q01663 11017199
    16209 1gd2:H (2.0) BS01 dna ? GO:0000976 ... Q01663 11017199
    16210 1gd2:H (2.0) BS02 dna ? GO:0000976 ... Q01663 11017199
    16211 1gd2:I (2.0) BS01 peptide ? GO:0000976 ... Q01663 11017199
    16212 1gd9:A (1.8) BS01 PLP 2.6.1.- GO:0003824 ... O59096 11134972
    16213 1gd9:B (1.8) BS01 PLP 2.6.1.- GO:0003824 ... O59096 11134972
    16214 1gdc:A (-1.00) BS01 ZN ? GO:0003700 ... P06536 8257681
    16215 1gdc:A (-1.00) BS02 ZN ? GO:0003700 ... P06536 8257681
    16216 1gdd:A (2.2) BS01 GDP ? GO:0000287 ... P10824 7481799
    16217 1gde:A (1.8) BS01 GLU 2.6.1.- GO:0003824 ... O59096 11134972
    16218 1gde:A (1.8) BS02 PLP 2.6.1.- GO:0003824 ... O59096 11134972
    16219 1gde:B (1.8) BS01 GLU 2.6.1.- GO:0003824 ... O59096 11134972
    16220 1gde:B (1.8) BS02 PLP 2.6.1.- GO:0003824 ... O59096 11134972
    16221 1gdi:A (1.8) BS01 HEM ? GO:0005634 ... P02240 8950274
    16222 1gdi:A (1.8) BS02 CMO ? GO:0005634 ... P02240 8950274
    16223 1gdj:A (1.7) BS01 HEM ? GO:0005634 ... P02240 7643380
    16224 1gdk:A (1.8) BS01 HEM ? GO:0005634 ... P02240 N/A
    16225 1gdk:A (1.8) BS02 ISQ ? GO:0005634 ... P02240 N/A
    16226 1gdl:A (1.8) BS01 HEM ? GO:0005634 ... P02240 8950274
    16227 1gdn:A (0.81) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 11134922
    16228 1gdq:A (0.93) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 11134922
    16229 1gdt:A (3.0) BS01 dna ? GO:0000150 ... P03012 7628011
    16230 1gdt:A (3.0) BS02 dna ? GO:0000150 ... P03012 7628011
    16231 1gdt:A (3.0) BS03 dna ? GO:0000150 ... P03012 7628011
    16232 1gdt:B (3.0) BS01 dna ? GO:0000150 ... P03012 7628011
    16233 1gdt:B (3.0) BS02 dna ? GO:0000150 ... P03012 7628011
    16234 1gdt:B (3.0) BS03 dna ? GO:0000150 ... P03012 7628011
    16235 1gdu:A (1.07) BS01 peptide 3.4.21.4 GO:0004252 ... P35049 11134922
    16236 1gdv:A (1.57) BS01 HEC ? GO:0005506 ... Q8WKJ8 11092924
    16237 1ge5:A (2.0) BS01 ZN 3.4.24.20 GO:0004222 ... P81054 11223512
    16238 1ge6:A (2.2) BS01 MAN 3.4.24.20 GO:0004222 ... P81054 11223512
    16239 1ge6:A (2.2) BS02 ZN 3.4.24.20 GO:0004222 ... P81054 11223512
    16240 1ge7:A (2.0) BS01 MAN 3.4.24.20 GO:0004222 ... P81054 11223512
    16241 1ge7:A (2.0) BS02 ZN 3.4.24.20 GO:0004222 ... P81054 11223512
    16242 1ge7:B (2.0) BS01 MAN 3.4.24.20 GO:0004222 ... P81054 11223512
    16243 1ge7:B (2.0) BS02 ZN 3.4.24.20 GO:0004222 ... P81054 11223512
    16244 1geb:A (2.03) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 11098139
    16245 1geb:A (2.03) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 11098139
    16246 1gec:E (2.1) BS01 peptide 3.4.22.25 GO:0006508 ... P05994 7548082
    16247 1ged:A (2.0) BS01 BR 1.7.1.14 GO:0004497 ... P23295 11076941
    16248 1ged:A (2.0) BS02 BR 1.7.1.14 GO:0004497 ... P23295 11076941
    16249 1ged:A (2.0) BS03 HEM 1.7.1.14 GO:0004497 ... P23295 11076941
    16250 1gee:A (1.6) BS01 NAD 1.1.1.47 GO:0047934 ... P40288 N/A
    16251 1gee:B (1.6) BS01 NAD 1.1.1.47 GO:0047934 ... P40288 N/A
    16252 1gee:E (1.6) BS01 NAD 1.1.1.47 GO:0047934 ... P40288 N/A
    16253 1gee:F (1.6) BS01 NAD 1.1.1.47 GO:0047934 ... P40288 N/A
    16254 1geg:A (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16255 1geg:A (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16256 1geg:B (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16257 1geg:B (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16258 1geg:C (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16259 1geg:C (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16260 1geg:D (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16261 1geg:D (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16262 1geg:E (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16263 1geg:E (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16264 1geg:F (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16265 1geg:F (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16266 1geg:G (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16267 1geg:G (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16268 1geg:H (1.7) BS01 GLC 1.1.1.304 GO:0019152 ... Q48436 11173520
    16269 1geg:H (1.7) BS02 NAD 1.1.1.304 GO:0019152 ... Q48436 11173520
    16270 1gei:A (1.6) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 11258878
    16271 1gei:A (1.6) BS02 NBN 1.7.1.14 GO:0004497 ... P23295 11258878
    16272 1gej:A (1.5) BS01 HEM 1.7.1.14 GO:0004497 ... P23295 11258878
    16273 1gej:A (1.5) BS02 NBN 1.7.1.14 GO:0004497 ... P23295 11258878
    16274 1gek:A (1.7) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 11258878
    16275 1gem:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 11258878
    16276 1gen:A (2.15) BS01 CA 3.4.24.24 N/A P08253 7583664
    16277 1ger:A (1.86) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 8061609
    16278 1ger:B (1.86) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 8061609
    16279 1ges:A (1.74) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16280 1ges:B (1.74) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16281 1get:A (2.0) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16282 1get:A (2.0) BS02 NAP 1.8.1.7 GO:0004362 ... P06715 7833810
    16283 1get:B (2.0) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16284 1get:B (2.0) BS02 NAP 1.8.1.7 GO:0004362 ... P06715 7833810
    16285 1geu:A (2.2) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16286 1geu:A (2.2) BS02 NAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16287 1geu:B (2.2) BS01 FAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16288 1geu:B (2.2) BS02 NAD 1.8.1.7 GO:0004362 ... P06715 7833810
    16289 1gew:A (2.0) BS01 PLP 2.6.1.9 GO:0000105 ... P06986 11294630
    16290 1gex:A (2.2) BS01 PLP 2.6.1.9 GO:0000105 ... P06986 11294630
    16291 1gex:A (2.2) BS02 HSA 2.6.1.9 GO:0000105 ... P06986 11294630
    16292 1gey:A (2.3) BS01 PPE 2.6.1.9 GO:0000105 ... P06986 11294630
    16293 1gff:1 (3.0) BS01 peptide ? GO:0005198 ... P03642 8642594
    16294 1gfi:A (2.2) BS01 MG ? GO:0000287 ... P10824 8073283
    16295 1gfi:A (2.2) BS02 ALF ? GO:0000287 ... P10824 8073283
    16296 1gfi:A (2.2) BS03 GDP ? GO:0000287 ... P10824 8073283
    16297 1gfm:A (3.5) BS01 C8E ? GO:0001530 ... P02931 8702816
    16298 1gfm:A (3.5) BS02 C8E ? GO:0001530 ... P02931 8702816
    16299 1gfn:A (3.1) BS01 C8E ? GO:0001530 ... P02931 8702816
    16300 1gfn:A (3.1) BS02 C8E ? GO:0001530 ... P02931 8702816
    16301 1gfo:A (3.3) BS01 C8E ? GO:0001530 ... P02931 8702816
    16302 1gfo:A (3.3) BS02 C8E ? GO:0001530 ... P02931 8702816
    16303 1gfp:A (2.7) BS01 C8E ? GO:0001530 ... P02931 8702816
    16304 1gfp:A (2.7) BS02 C8E ? GO:0001530 ... P02931 8702816
    16305 1gfq:A (2.8) BS01 C8E ? GO:0001530 ... P02931 8702816
    16306 1gfw:A (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    16307 1gfw:B (2.8) BS01 MSI 3.4.22.56 GO:0004197 ... P42574 10821855 BindingDB: Ki=15nM, IC50=114nM, EC50=7670nM
    16308 1gfy:A (2.13) BS01 COL 3.1.3.48 GO:0004725 ... P18031 10748206 BindingDB: Ki=8317.64nM
    16309 1gfz:A (2.3) BS01 PLP 2.4.1.1 GO:0004645 ... P00489 10924512
    16310 1gfz:A (2.3) BS02 IMP 2.4.1.1 GO:0004645 ... P00489 10924512
    16311 1gfz:A (2.3) BS03 CFF 2.4.1.1 GO:0004645 ... P00489 10924512 MOAD: Ki~0.15mM
    BindingDB: IC50=114000nM
    16312 1gg0:A (3.0) BS01 PO4 2.5.1.55 GO:0005737 ... P0A715 10926505
    16313 1gg1:A (2.0) BS01 PGA 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16314 1gg1:A (2.0) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16315 1gg1:B (2.0) BS01 PGA 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16316 1gg1:B (2.0) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16317 1gg1:C (2.0) BS01 PGA 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16318 1gg1:C (2.0) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16319 1gg1:D (2.0) BS01 PGA 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16320 1gg1:D (2.0) BS02 MN 2.5.1.54 GO:0003849 ... P0AB91 10926516
    16321 1gg2:A (2.4) BS01 GDP ? GO:0000287 ... P10824 8521505
    16322 1gg5:A (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16323 1gg5:A (2.5) BS02 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16324 1gg5:A (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16325 1gg5:A (2.5) BS04 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16326 1gg5:B (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16327 1gg5:B (2.5) BS02 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16328 1gg5:B (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16329 1gg5:B (2.5) BS04 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16330 1gg5:C (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16331 1gg5:C (2.5) BS02 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16332 1gg5:C (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16333 1gg5:C (2.5) BS04 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16334 1gg5:D (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16335 1gg5:D (2.5) BS02 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16336 1gg5:D (2.5) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 11587640
    16337 1gg5:D (2.5) BS04 E09 1.6.5.2 GO:0000209 ... P15559 11587640
    16338 1gg6:B (1.4) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 11327865
    16339 1gg6:B (1.4) BS02 APL 3.4.21.1 GO:0004252 ... P00766 11327865
    16340 1gg6:C (1.4) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 11327865
    16341 1gg6:C (1.4) BS02 APF 3.4.21.1 GO:0004252 ... P00766 11327865
    16342 1gg8:A (2.31) BS01 GLG 2.4.1.1 GO:0004645 ... P00489 8180201 MOAD: Ki=1mM
    BindingDB: Ki=370000nM
    16343 1gg8:A (2.31) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 8180201
    16344 1gg8:A (2.31) BS03 IMP 2.4.1.1 GO:0004645 ... P00489 8180201
    16345 1gg9:A (1.89) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16346 1gg9:B (1.89) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16347 1gg9:C (1.89) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16348 1gg9:D (1.89) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16349 1ggd:B (1.5) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 11327865
    16350 1ggd:B (1.5) BS02 FAF 3.4.21.1 GO:0004252 ... P00766 11327865
    16351 1ggd:C (1.5) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 11327865
    16352 1ggd:C (1.5) BS02 FAF 3.4.21.1 GO:0004252 ... P00766 11327865
    16353 1gge:A (1.89) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16354 1gge:B (1.89) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16355 1gge:C (1.89) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16356 1gge:D (1.89) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16357 1ggf:A (2.28) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16358 1ggf:A (2.28) BS02 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16359 1ggf:A (2.28) BS03 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16360 1ggf:B (2.28) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16361 1ggf:B (2.28) BS02 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16362 1ggf:B (2.28) BS03 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16363 1ggf:C (2.28) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16364 1ggf:C (2.28) BS02 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16365 1ggf:C (2.28) BS03 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16366 1ggf:D (2.28) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16367 1ggf:D (2.28) BS02 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16368 1ggf:D (2.28) BS03 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16369 1ggf:D (2.28) BS04 PEO 1.11.1.6 GO:0004096 ... P21179 11455600
    16370 1ggh:A (2.15) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16371 1ggh:B (2.15) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16372 1ggh:C (2.15) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16373 1ggh:D (2.15) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16374 1ggi:H (2.8) BS01 peptide ? N/A P01863 8327513
    16375 1ggi:J (2.8) BS01 peptide ? N/A P01863 8327513
    16376 1ggi:L (2.8) BS01 peptide N/A N/A N/A 8327513
    16377 1ggi:M (2.8) BS01 peptide N/A N/A N/A 8327513
    16378 1ggj:A (1.92) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16379 1ggj:B (1.92) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16380 1ggj:C (1.92) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16381 1ggj:D (1.92) BS01 HDD 1.11.1.6 GO:0004096 ... P21179 11455600
    16382 1ggk:A (2.26) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16383 1ggk:B (2.26) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16384 1ggk:C (2.26) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16385 1ggk:D (2.26) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 11455600
    16386 1ggm:A (3.4) BS01 GAP 6.1.1.14 GO:0000166 ... P56206 10064708
    16387 1ggm:B (3.4) BS01 GAP 6.1.1.14 GO:0000166 ... P56206 10064708
    16388 1ggn:A (2.36) BS01 GLS 2.4.1.1 GO:0004645 ... P00489 11741774 MOAD: Ki=3.1uM
    BindingDB: Ki=3100nM, IC50=3100nM
    16389 1ggn:A (2.36) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 11741774
    16390 1ggy:A (2.5) BS01 YB 2.3.2.13 GO:0003810 ... P00488 9988734
    16391 1ggy:B (2.5) BS01 YB 2.3.2.13 GO:0003810 ... P00488 9988734
    16392 1ggy:B (2.5) BS02 YB 2.3.2.13 GO:0003810 ... P00488 9988734
    16393 1ggz:A (1.5) BS01 CA ? GO:0005509 ... P27482 12067719
    16394 1ggz:A (1.5) BS02 CA ? GO:0005509 ... P27482 12067719
    16395 1ggz:A (1.5) BS03 CA ? GO:0005509 ... P27482 12067719
    16396 1ggz:A (1.5) BS04 CA ? GO:0005509 ... P27482 12067719
    16397 1gh4:A (1.9) BS01 CA 3.1.1.4 GO:0002227 ... P00593 12460575
    16398 1gh4:A (1.9) BS02 CA 3.1.1.4 GO:0002227 ... P00593 12460575
    16399 1gha:F (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 N/A
    16400 1gha:G (2.2) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).