SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    163801 3m0w:B (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163802 3m0w:B (2.8) BS02 CA ? GO:0001837 ... P26447 20421509
    163803 3m0w:B (2.8) BS03 CA ? GO:0001837 ... P26447 20421509
    163804 3m0w:B (2.8) BS04 P77 ? GO:0001837 ... P26447 20421509
    163805 3m0w:B (2.8) BS05 P77 ? GO:0001837 ... P26447 20421509
    163806 3m0w:C (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163807 3m0w:C (2.8) BS02 P77 ? GO:0001837 ... P26447 20421509
    163808 3m0w:C (2.8) BS03 CA ? GO:0001837 ... P26447 20421509
    163809 3m0w:C (2.8) BS04 CA ? GO:0001837 ... P26447 20421509
    163810 3m0w:D (2.8) BS01 CA ? GO:0001837 ... P26447 20421509
    163811 3m0w:D (2.8) BS02 CA ? GO:0001837 ... P26447 20421509
    163812 3m0w:D (2.8) BS03 P77 ? GO:0001837 ... P26447 20421509
    163813 3m0w:E (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163814 3m0w:E (2.8) BS02 P77 ? GO:0001837 ... P26447 20421509
    163815 3m0w:E (2.8) BS03 CA ? GO:0001837 ... P26447 20421509
    163816 3m0w:E (2.8) BS04 CA ? GO:0001837 ... P26447 20421509
    163817 3m0w:F (2.8) BS01 CA ? GO:0001837 ... P26447 20421509
    163818 3m0w:F (2.8) BS02 CA ? GO:0001837 ... P26447 20421509
    163819 3m0w:F (2.8) BS03 P77 ? GO:0001837 ... P26447 20421509
    163820 3m0w:G (2.8) BS01 CA ? GO:0001837 ... P26447 20421509
    163821 3m0w:G (2.8) BS02 CA ? GO:0001837 ... P26447 20421509
    163822 3m0w:H (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163823 3m0w:H (2.8) BS02 CA ? GO:0001837 ... P26447 20421509
    163824 3m0w:H (2.8) BS03 CA ? GO:0001837 ... P26447 20421509
    163825 3m0w:I (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163826 3m0w:I (2.8) BS02 P77 ? GO:0001837 ... P26447 20421509
    163827 3m0w:I (2.8) BS03 P77 ? GO:0001837 ... P26447 20421509
    163828 3m0w:I (2.8) BS04 CA ? GO:0001837 ... P26447 20421509
    163829 3m0w:I (2.8) BS05 CA ? GO:0001837 ... P26447 20421509
    163830 3m0w:J (2.8) BS01 P77 ? GO:0001837 ... P26447 20421509
    163831 3m0w:J (2.8) BS02 P77 ? GO:0001837 ... P26447 20421509
    163832 3m0w:J (2.8) BS03 CA ? GO:0001837 ... P26447 20421509
    163833 3m0w:J (2.8) BS04 CA ? GO:0001837 ... P26447 20421509
    163834 3m0x:A (1.79) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163835 3m0x:A (1.79) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163836 3m0x:A (1.79) BS03 PSJ 5.3.1.14 N/A Q75WH8 20977999
    163837 3m0x:B (1.79) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163838 3m0x:B (1.79) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163839 3m0x:B (1.79) BS03 PSJ 5.3.1.14 N/A Q75WH8 20977999
    163840 3m0x:C (1.79) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163841 3m0x:C (1.79) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163842 3m0x:C (1.79) BS03 PSJ 5.3.1.14 N/A Q75WH8 20977999
    163843 3m0x:D (1.79) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163844 3m0x:D (1.79) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163845 3m0x:D (1.79) BS03 PSJ 5.3.1.14 N/A Q75WH8 20977999
    163846 3m0y:A (1.96) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163847 3m0y:A (1.96) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163848 3m0y:A (1.96) BS03 RNS 5.3.1.14 N/A Q75WH8 20977999
    163849 3m0y:B (1.96) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163850 3m0y:B (1.96) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163851 3m0y:B (1.96) BS03 RNS 5.3.1.14 N/A Q75WH8 20977999
    163852 3m0y:C (1.96) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163853 3m0y:C (1.96) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163854 3m0y:C (1.96) BS03 RNS 5.3.1.14 N/A Q75WH8 20977999
    163855 3m0y:D (1.96) BS01 MN 5.3.1.14 N/A Q75WH8 20977999
    163856 3m0y:D (1.96) BS02 MN 5.3.1.14 N/A Q75WH8 20977999
    163857 3m0y:D (1.96) BS03 RNS 5.3.1.14 N/A Q75WH8 20977999
    163858 3m11:A (2.75) BS01 AKI 2.7.11.1 GO:0000212 ... O14965 20550212 BindingDB: IC50=43nM
    163859 3m12:A (1.6) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163860 3m12:B (1.6) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163861 3m13:A (2.1) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163862 3m13:B (2.1) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163863 3m13:C (2.1) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163864 3m13:D (2.1) BS01 FAD 1.5.3.1 GO:0005737 ... P40859 20353187
    163865 3m14:A (1.38) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    163866 3m14:A (1.38) BS02 BEV 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    163867 3m15:A (2.6) BS01 HEM ? GO:0005506 ... P0ABE7 20721993
    163868 3m15:A (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 20721993
    163869 3m15:B (2.6) BS01 HEM ? GO:0005506 ... P0ABE7 20721993
    163870 3m15:B (2.6) BS02 ZN ? GO:0005506 ... P0ABE7 20721993
    163871 3m15:C (2.6) BS01 HEM ? GO:0005506 ... P0ABE7 20721993
    163872 3m17:A (2.6) BS01 peptide ? N/A P55899 20592032
    163873 3m17:C (2.6) BS01 peptide ? N/A P55899 20592032
    163874 3m17:E (2.6) BS01 peptide ? N/A P55899 20592032
    163875 3m17:G (2.6) BS01 peptide ? N/A P55899 20592032
    163876 3m1b:A (3.1) BS01 peptide ? N/A P55899 20592032
    163877 3m1b:C (3.1) BS01 peptide ? N/A P55899 20592032
    163878 3m1c:A (3.0) BS01 XYL ? GO:0019031 ... P89445 20601960
    163879 3m1d:A (2.0) BS01 ZN 2.3.2.27 N/A Q13490 20447407
    163880 3m1d:B (2.0) BS01 ZN 2.3.2.27 N/A Q13490 20447407
    163881 3m1f:A (2.89) BS01 peptide 3.6.4.- GO:0000287 ... P68135 20804767
    163882 3m1f:A (2.89) BS02 ATP 3.6.4.- GO:0000287 ... P68135 20804767
    163883 3m1h:A (1.56) BS01 CA 3.4.22.47 N/A Q51817 21812842
    163884 3m1h:A (1.56) BS02 CA 3.4.22.47 N/A Q51817 21812842
    163885 3m1h:B (1.56) BS01 CA 3.4.22.47 N/A Q51817 21812842
    163886 3m1h:B (1.56) BS02 CA 3.4.22.47 N/A Q51817 21812842
    163887 3m1h:C (1.56) BS01 CA 3.4.22.47 N/A Q51817 21812842
    163888 3m1h:C (1.56) BS02 CA 3.4.22.47 N/A Q51817 21812842
    163889 3m1h:D (1.56) BS01 CA 3.4.22.47 N/A Q51817 21812842
    163890 3m1h:D (1.56) BS02 CA 3.4.22.47 N/A Q51817 21812842
    163891 3m1i:A (2.0) BS01 GTP ? GO:0000054 ... P32835 20485264
    163892 3m1i:A (2.0) BS02 MG ? GO:0000054 ... P32835 20485264
    163893 3m1j:A (1.8) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 20931644
    163894 3m1k:A (1.35) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 20629007
    163895 3m1k:A (1.35) BS02 BEW 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 20629007 MOAD: Ki=4.1uM
    163896 3m1m:A (1.85) BS01 ZN ? N/A Q54324 20511586
    163897 3m1n:A (1.85) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 10753901
    163898 3m1n:B (1.85) BS01 ZN 3.1.-.- GO:0007267 ... Q15465 10753901
    163899 3m1o:A (1.2) BS01 CJZ ? GO:0001523 ... P02766 21059958
    163900 3m1o:B (1.2) BS01 CJZ ? GO:0001523 ... P02766 21059958
    163901 3m1p:A (2.2) BS01 PO4 5.3.1.6 GO:0005975 ... Q4CQE2 21205211
    163902 3m1p:B (2.2) BS01 PO4 5.3.1.6 GO:0005975 ... Q4CQE2 21205211
    163903 3m1p:B (2.2) BS02 PO4 5.3.1.6 GO:0005975 ... Q4CQE2 21205211
    163904 3m1q:A (1.69) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    163905 3m1r:A (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163906 3m1r:A (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163907 3m1r:B (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163908 3m1r:B (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163909 3m1r:C (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163910 3m1r:C (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163911 3m1r:D (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163912 3m1r:D (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163913 3m1r:E (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163914 3m1r:E (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163915 3m1r:F (2.199) BS01 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163916 3m1r:F (2.199) BS02 CA 3.5.3.8 GO:0006548 ... P42068 N/A
    163917 3m1s:A (3.134) BS01 DW1 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 20821241
    163918 3m1s:B (3.134) BS01 DW1 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 20821241
    163919 3m1v:A (1.45) BS01 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163920 3m1v:A (1.45) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163921 3m1v:A (1.45) BS03 COM 2.8.4.1 GO:0005737 ... P11558 20707311
    163922 3m1v:A (1.45) BS04 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163923 3m1v:A (1.45) BS05 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163924 3m1v:B (1.45) BS01 TP7 2.8.4.1 GO:0005737 ... P11560 20707311
    163925 3m1v:B (1.45) BS02 COM 2.8.4.1 GO:0005737 ... P11560 20707311
    163926 3m1v:B (1.45) BS03 F43 2.8.4.1 GO:0005737 ... P11560 20707311
    163927 3m1v:C (1.45) BS01 F43 2.8.4.1 GO:0005737 ... P11562 20707311
    163928 3m1v:D (1.45) BS01 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163929 3m1v:D (1.45) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163930 3m1v:D (1.45) BS03 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163931 3m1v:D (1.45) BS04 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163932 3m1v:D (1.45) BS05 COM 2.8.4.1 GO:0005737 ... P11558 20707311
    163933 3m1v:E (1.45) BS01 F43 2.8.4.1 GO:0005737 ... P11560 20707311
    163934 3m1v:E (1.45) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 20707311
    163935 3m1v:E (1.45) BS03 COM 2.8.4.1 GO:0005737 ... P11560 20707311
    163936 3m1v:F (1.45) BS01 F43 2.8.4.1 GO:0005737 ... P11562 20707311
    163937 3m1w:A (1.38) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    163938 3m1x:A (1.2) BS01 FLC ? GO:0005739 ... C4LXT9 40314238
    163939 3m1y:A (2.4) BS01 MG 3.1.3.3 GO:0000287 ... O25367 N/A
    163940 3m1y:B (2.4) BS01 MG 3.1.3.3 GO:0000287 ... O25367 N/A
    163941 3m1y:C (2.4) BS01 MG 3.1.3.3 GO:0000287 ... O25367 N/A
    163942 3m1y:D (2.4) BS01 MG 3.1.3.3 GO:0000287 ... O25367 N/A
    163943 3m1z:A (1.42) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 20369850
    163944 3m1z:A (1.42) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 20369850
    163945 3m1z:B (1.42) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 20369850
    163946 3m1z:B (1.42) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 20369850
    163947 3m23:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163948 3m25:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163949 3m26:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163950 3m27:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163951 3m28:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163952 3m29:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163953 3m2a:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163954 3m2b:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163955 3m2c:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163956 3m2d:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163957 3m2e:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163958 3m2f:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163959 3m2g:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163960 3m2h:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163961 3m2i:A (1.4) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 20230048
    163962 3m2j:A (1.8) BS01 F5M 3.5.2.6 GO:0005886 ... P00808 N/A
    163963 3m2k:A (3.5) BS01 CEF 3.5.2.6 GO:0005886 ... P00808 21443768
    163964 3m2k:B (3.5) BS01 CEF 3.5.2.6 GO:0005886 ... P00808 21443768
    163965 3m2m:A (2.95) BS01 BGC ? GO:0005515 ... P11762 20873803
    163966 3m2m:A (2.95) BS02 GAL ? GO:0005515 ... P11762 20873803
    163967 3m2m:C (2.95) BS01 BGC ? GO:0005515 ... P11762 20873803
    163968 3m2m:C (2.95) BS02 GAL ? GO:0005515 ... P11762 20873803
    163969 3m2m:D (2.95) BS01 BGC ? GO:0005515 ... P11762 20873803
    163970 3m2m:D (2.95) BS02 GAL ? GO:0005515 ... P11762 20873803
    163971 3m2m:E (2.95) BS01 BGC ? GO:0005515 ... P11762 20873803
    163972 3m2m:E (2.95) BS02 GAL ? GO:0005515 ... P11762 20873803
    163973 3m2m:H (2.95) BS01 BGC ? GO:0005515 ... P11762 20873803
    163974 3m2m:H (2.95) BS02 GAL ? GO:0005515 ... P11762 20873803
    163975 3m2n:A (1.65) BS01 J74 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22440859
    163976 3m2n:A (1.65) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22440859
    163977 3m2p:B (2.95) BS01 UDP 5.1.3.7 GO:0003974 ... Q814Z6 N/A
    163978 3m2r:A (1.3) BS01 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163979 3m2r:A (1.3) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163980 3m2r:A (1.3) BS03 COM 2.8.4.1 GO:0005737 ... P11558 20707311
    163981 3m2r:A (1.3) BS04 TPZ 2.8.4.1 GO:0005737 ... P11558 20707311
    163982 3m2r:A (1.3) BS05 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163983 3m2r:A (1.3) BS06 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163984 3m2r:A (1.3) BS07 TPZ 2.8.4.1 GO:0005737 ... P11558 20707311
    163985 3m2r:B (1.3) BS01 TP7 2.8.4.1 GO:0005737 ... P11560 20707311
    163986 3m2r:B (1.3) BS02 COM 2.8.4.1 GO:0005737 ... P11560 20707311
    163987 3m2r:B (1.3) BS03 TPZ 2.8.4.1 GO:0005737 ... P11560 20707311
    163988 3m2r:B (1.3) BS04 F43 2.8.4.1 GO:0005737 ... P11560 20707311
    163989 3m2r:C (1.3) BS01 F43 2.8.4.1 GO:0005737 ... P11562 20707311
    163990 3m2r:D (1.3) BS01 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163991 3m2r:D (1.3) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163992 3m2r:D (1.3) BS03 TPZ 2.8.4.1 GO:0005737 ... P11558 20707311
    163993 3m2r:D (1.3) BS04 F43 2.8.4.1 GO:0005737 ... P11558 20707311
    163994 3m2r:D (1.3) BS05 TP7 2.8.4.1 GO:0005737 ... P11558 20707311
    163995 3m2r:D (1.3) BS06 COM 2.8.4.1 GO:0005737 ... P11558 20707311
    163996 3m2r:D (1.3) BS07 TPZ 2.8.4.1 GO:0005737 ... P11558 20707311
    163997 3m2r:E (1.3) BS01 F43 2.8.4.1 GO:0005737 ... P11560 20707311
    163998 3m2r:E (1.3) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 20707311
    163999 3m2r:E (1.3) BS03 COM 2.8.4.1 GO:0005737 ... P11560 20707311
    164000 3m2r:E (1.3) BS04 TPZ 2.8.4.1 GO:0005737 ... P11560 20707311

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).