SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16401 1gha:G (2.2) BS02 peptide 3.4.21.1 GO:0004252 ... P00766 N/A
    16402 1ghb:F (2.0) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 N/A
    16403 1ghb:G (2.0) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 N/A
    16404 1ghb:G (2.0) BS02 peptide 3.4.21.1 GO:0004252 ... P00766 N/A
    16405 1ghb:G (2.0) BS03 TRP 3.4.21.1 GO:0004252 ... P00766 N/A
    16406 1ghe:A (1.55) BS01 ACO 2.3.1.- GO:0016747 ... P16966 12527305
    16407 1ghe:B (1.55) BS01 ACO 2.3.1.- GO:0016747 ... P16966 12527305
    16408 1ghi:A (2.3) BS01 CO3 3.5.2.6 GO:0008800 ... P00807 11327855
    16409 1ghm:A (1.86) BS01 CED 3.5.2.6 GO:0008800 ... P00807 11327855
    16410 1ghp:A (1.76) BS01 PNM 3.5.2.6 GO:0008800 ... P00807 11327855
    16411 1ghv:H (1.85) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11292354
    16412 1ghv:H (1.85) BS02 120 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=45uM
    16413 1ghw:H (1.75) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11292354
    16414 1ghw:H (1.75) BS02 BMZ 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=4uM
    16415 1ghx:H (1.65) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11292354
    16416 1ghx:H (1.65) BS02 BMZ 3.4.21.5 GO:0004252 ... P00734 11292354
    16417 1ghy:H (1.85) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11292354
    16418 1ghy:H (1.85) BS02 ZN 3.4.21.5 GO:0004252 ... P00734 11292354
    16419 1ghy:H (1.85) BS03 121 3.4.21.5 GO:0004252 ... P00734 11292354 MOAD: Ki=0.008uM
    16420 1ghz:A (1.39) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16421 1ghz:A (1.39) BS02 MG 3.4.21.4 GO:0004175 ... P00760 11292354
    16422 1ghz:A (1.39) BS03 120 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=16uM
    16423 1gi0:A (1.42) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16424 1gi0:A (1.42) BS02 MG 3.4.21.4 GO:0004175 ... P00760 11292354
    16425 1gi0:A (1.42) BS03 BMZ 3.4.21.4 GO:0004175 ... P00760 11292354
    16426 1gi1:A (1.42) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16427 1gi1:A (1.42) BS02 BMZ 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=3.6uM
    16428 1gi2:A (1.38) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16429 1gi2:A (1.38) BS02 122 3.4.21.4 GO:0004175 ... P00760 11292354 BindingDB: Ki=3600nM
    16430 1gi3:A (1.44) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16431 1gi3:A (1.44) BS02 BMZ 3.4.21.4 GO:0004175 ... P00760 11292354
    16432 1gi4:A (1.37) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16433 1gi4:A (1.37) BS02 ZN 3.4.21.4 GO:0004175 ... P00760 11292354
    16434 1gi4:A (1.37) BS03 122 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=0.065uM
    BindingDB: Ki=3600nM
    16435 1gi5:A (1.6) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16436 1gi5:A (1.6) BS02 123 3.4.21.4 GO:0004175 ... P00760 11292354
    16437 1gi6:A (1.49) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11292354
    16438 1gi6:A (1.49) BS02 124 3.4.21.4 GO:0004175 ... P00760 11292354 MOAD: Ki=1.7uM
    BindingDB: Ki=1700nM
    16439 1gi7:B (1.79) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11292354
    16440 1gi7:B (1.79) BS02 120 3.4.21.73 GO:0004252 ... P00749 11292354 MOAD: Ki=31uM
    16441 1gi8:B (1.75) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11292354
    16442 1gi8:B (1.75) BS02 BMZ 3.4.21.73 GO:0004252 ... P00749 11292354
    16443 1gi9:B (1.8) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11292354
    16444 1gi9:B (1.8) BS02 123 3.4.21.73 GO:0004252 ... P00749 11292354 MOAD: Ki=1.1uM
    16445 1gia:A (2.0) BS01 MG ? GO:0000287 ... P10824 8073283
    16446 1gia:A (2.0) BS02 GSP ? GO:0000287 ... P10824 8073283
    16447 1gic:A (2.0) BS01 GYP ? GO:0030246 ... P02866 15299735
    16448 1gic:A (2.0) BS02 MN ? GO:0030246 ... P02866 15299735
    16449 1gic:A (2.0) BS03 CA ? GO:0030246 ... P02866 15299735
    16450 1gic:B (2.0) BS01 GYP ? GO:0030246 ... P02866 15299735
    16451 1gic:B (2.0) BS02 MN ? GO:0030246 ... P02866 15299735
    16452 1gic:B (2.0) BS03 CA ? GO:0030246 ... P02866 15299735
    16453 1gih:A (2.8) BS01 1PU 2.7.11.22 GO:0000082 ... P24941 11335721 BindingDB: IC50=80nM
    16454 1gii:A (2.0) BS01 1PU 2.7.11.22 GO:0000082 ... P24941 11335721 BindingDB: IC50=80nM
    16455 1gij:A (2.2) BS01 2PU 2.7.11.22 GO:0000082 ... P24941 11335721
    16456 1gil:A (2.3) BS01 MG ? GO:0000287 ... P10824 8073283
    16457 1gil:A (2.3) BS02 GSP ? GO:0000287 ... P10824 8073283
    16458 1gim:A (2.5) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16459 1gim:A (2.5) BS02 HDA 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16460 1gim:A (2.5) BS03 IMP 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16461 1gim:A (2.5) BS04 GDP 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16462 1gin:A (2.8) BS01 MG 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16463 1gin:A (2.8) BS02 HDA 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16464 1gin:A (2.8) BS03 IMP 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16465 1gin:A (2.8) BS04 GDP 6.3.4.4 GO:0000166 ... P0A7D4 9000627
    16466 1giq:A (1.8) BS01 NAI ? GO:0005576 ... Q46220 12498797
    16467 1giq:B (1.8) BS01 NAI ? GO:0005576 ... Q46220 12498797
    16468 1gir:A (2.1) BS01 NDP ? GO:0005576 ... Q46220 12498797
    16469 1gis:A (1.7) BS01 DA 3.2.2.22 GO:0017148 ... P09989 12874371
    16470 1git:A (2.6) BS01 PO4 ? GO:0000287 ... P10824 8939752
    16471 1git:A (2.6) BS02 GDP ? GO:0000287 ... P10824 8939752
    16472 1giu:A (1.8) BS01 ADE 3.2.2.22 GO:0017148 ... P09989 12874371
    16473 1giw:A (-1.00) BS01 HEC ? GO:0005515 ... P00004 10499099
    16474 1gj4:H (1.81) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11731301
    16475 1gj4:H (1.81) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 11731301
    16476 1gj4:H (1.81) BS03 132 3.4.21.5 GO:0004252 ... P00734 11731301 BindingDB: Ki=60000nM
    16477 1gj5:H (1.73) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 11731301
    16478 1gj5:H (1.73) BS02 130 3.4.21.5 GO:0004252 ... P00734 11731301
    16479 1gj6:A (1.5) BS01 CA 3.4.21.4 GO:0004175 ... P00760 11731301
    16480 1gj6:A (1.5) BS02 132 3.4.21.4 GO:0004175 ... P00760 11731301 MOAD: Ki=0.23uM
    BindingDB: Ki=100nM
    16481 1gj7:B (1.5) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16482 1gj7:B (1.5) BS02 132 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.009uM
    BindingDB: Ki=14nM
    16483 1gj8:B (1.64) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16484 1gj8:B (1.64) BS02 133 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.11uM
    16485 1gj9:B (1.8) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16486 1gj9:B (1.8) BS02 134 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.011uM
    BindingDB: Ki=140nM
    16487 1gja:B (1.56) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16488 1gja:B (1.56) BS02 135 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=3.8uM
    BindingDB: Ki=2700nM
    16489 1gjb:B (1.9) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16490 1gjb:B (1.9) BS02 130 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.45uM
    16491 1gjc:B (1.73) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16492 1gjc:B (1.73) BS02 130 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=0.45uM
    16493 1gjd:B (1.75) BS01 peptide 3.4.21.73 GO:0004252 ... P00749 11731301
    16494 1gjd:B (1.75) BS02 136 3.4.21.73 GO:0004252 ... P00749 11731301 MOAD: Ki=6uM
    BindingDB: Ki=6000nM
    16495 1gji:A (2.85) BS01 dna ? GO:0003677 ... P16236 11587641
    16496 1gji:A (2.85) BS02 dna ? GO:0003677 ... P16236 11587641
    16497 1gji:B (2.85) BS01 dna ? GO:0003677 ... P16236 11587641
    16498 1gji:B (2.85) BS02 dna ? GO:0003677 ... P16236 11587641
    16499 1gjm:A (2.2) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    16500 1gjm:A (2.2) BS02 FEM 1.14.15.1 GO:0004497 ... P00183 N/A
    16501 1gjm:A (2.2) BS03 FEM 1.14.15.1 GO:0004497 ... P00183 N/A
    16502 1gjn:A (1.35) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 11935353
    16503 1gjp:A (1.8) BS01 4OX 4.2.1.24 GO:0004655 ... P05373 11513881
    16504 1gjp:A (1.8) BS02 ZN 4.2.1.24 GO:0004655 ... P05373 11513881
    16505 1gjq:A (2.7) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P24474 11829453
    16506 1gjq:A (2.7) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P24474 11829453
    16507 1gjq:B (2.7) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P24474 11829453
    16508 1gjq:B (2.7) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P24474 11829453
    16509 1gjr:A (2.1) BS01 FAD 1.18.1.2 GO:0016491 ... P21890 12079352
    16510 1gjr:A (2.1) BS02 NAP 1.18.1.2 GO:0016491 ... P21890 12079352
    16511 1gjv:A (2.7) BS01 K 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 11562470
    16512 1gjv:A (2.7) BS02 AGS 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 11562470
    16513 1gjw:A (2.1) BS01 GLC ? GO:0004556 ... O33838 11545590
    16514 1gjw:A (2.1) BS02 GLC ? GO:0004556 ... O33838 11545590
    16515 1gjw:A (2.1) BS03 GLC ? GO:0004556 ... O33838 11545590
    16516 1gk0:B (2.5) BS01 PO4 3.5.1.93 GO:0016787 ... P07662 11742126
    16517 1gk0:B (2.5) BS02 EDO 3.5.1.93 GO:0016787 ... P07662 11742126
    16518 1gk0:D (2.5) BS01 PO4 3.5.1.93 GO:0016787 ... P07662 11742126
    16519 1gk0:D (2.5) BS02 EDO 3.5.1.93 GO:0016787 ... P07662 11742126
    16520 1gk1:B (2.4) BS01 GOL 3.5.1.93 GO:0016787 ... P07662 11742126
    16521 1gk1:D (2.4) BS01 GOL 3.5.1.93 GO:0016787 ... P07662 11742126
    16522 1gk8:A (1.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11641402
    16523 1gk8:A (1.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11641402
    16524 1gk8:C (1.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11641402
    16525 1gk8:C (1.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11641402
    16526 1gk8:E (1.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11641402
    16527 1gk8:E (1.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11641402
    16528 1gk8:G (1.4) BS01 MG 4.1.1.39 GO:0000287 ... P00877 11641402
    16529 1gk8:G (1.4) BS02 CAP 4.1.1.39 GO:0000287 ... P00877 11641402
    16530 1gk9:B (1.3) BS01 CA 3.5.1.11 GO:0016787 ... P06875 11601852
    16531 1gka:A (3.23) BS01 AXT ? GO:0000302 ... P58989 12119396
    16532 1gka:A (3.23) BS02 AXT ? GO:0000302 ... P58989 12119396
    16533 1gka:B (3.23) BS01 AXT ? GO:0000302 ... P80007 12119396
    16534 1gka:B (3.23) BS02 AXT ? GO:0000302 ... P80007 12119396
    16535 1gkb:A (1.56) BS01 MN ? GO:0030246 ... P02866 11976483
    16536 1gkb:A (1.56) BS02 CA ? GO:0030246 ... P02866 11976483
    16537 1gkb:A (1.56) BS03 MG ? GO:0030246 ... P02866 11976483
    16538 1gkb:B (1.56) BS01 MN ? GO:0030246 ... P02866 11976483
    16539 1gkb:B (1.56) BS02 CA ? GO:0030246 ... P02866 11976483
    16540 1gkb:B (1.56) BS03 MG ? GO:0030246 ... P02866 11976483
    16541 1gkc:A (2.3) BS01 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16542 1gkc:A (2.3) BS02 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16543 1gkc:A (2.3) BS03 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16544 1gkc:A (2.3) BS04 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16545 1gkc:A (2.3) BS05 NFH 3.4.24.35 GO:0004222 ... P14780 12051944
    16546 1gkc:A (2.3) BS06 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16547 1gkc:A (2.3) BS07 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16548 1gkc:B (2.3) BS01 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16549 1gkc:B (2.3) BS02 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16550 1gkc:B (2.3) BS03 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16551 1gkc:B (2.3) BS04 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16552 1gkc:B (2.3) BS05 NFH 3.4.24.35 GO:0004222 ... P14780 12051944
    16553 1gkc:B (2.3) BS06 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16554 1gkc:B (2.3) BS07 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16555 1gkd:A (2.1) BS01 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16556 1gkd:A (2.1) BS02 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16557 1gkd:A (2.1) BS03 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16558 1gkd:A (2.1) BS04 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16559 1gkd:A (2.1) BS05 STN 3.4.24.35 GO:0004222 ... P14780 12051944
    16560 1gkd:A (2.1) BS06 BUM 3.4.24.35 GO:0004222 ... P14780 12051944
    16561 1gkd:A (2.1) BS07 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16562 1gkd:A (2.1) BS08 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16563 1gkd:B (2.1) BS01 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16564 1gkd:B (2.1) BS02 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16565 1gkd:B (2.1) BS03 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16566 1gkd:B (2.1) BS04 CA 3.4.24.35 GO:0004222 ... P14780 12051944
    16567 1gkd:B (2.1) BS05 STN 3.4.24.35 GO:0004222 ... P14780 12051944
    16568 1gkd:B (2.1) BS06 BUM 3.4.24.35 GO:0004222 ... P14780 12051944
    16569 1gkd:B (2.1) BS07 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16570 1gkd:B (2.1) BS08 ZN 3.4.24.35 GO:0004222 ... P14780 12051944
    16571 1gkf:B (1.41) BS01 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16572 1gkf:B (1.41) BS02 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16573 1gkf:B (1.41) BS03 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16574 1gkf:B (1.41) BS04 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16575 1gkf:B (1.41) BS05 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16576 1gkf:B (1.41) BS06 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16577 1gkf:B (1.41) BS07 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16578 1gkf:B (1.41) BS08 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16579 1gkf:B (1.41) BS09 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16580 1gkf:B (1.41) BS10 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16581 1gkf:B (1.41) BS11 EDO 3.5.1.11 GO:0016787 ... P06875 11601852
    16582 1gkf:B (1.41) BS12 CA 3.5.1.11 GO:0016787 ... P06875 11601852
    16583 1gki:A (3.0) BS01 ADP ? N/A Q04230 11214325
    16584 1gki:B (3.0) BS01 ADP ? N/A Q04230 11214325
    16585 1gki:B (3.0) BS02 ADP ? N/A Q04230 11214325
    16586 1gki:D (3.0) BS01 ADP ? N/A Q04230 11214325
    16587 1gki:D (3.0) BS02 ADP ? N/A Q04230 11214325
    16588 1gki:E (3.0) BS01 ADP ? N/A Q04230 11214325
    16589 1gki:E (3.0) BS02 ADP ? N/A Q04230 11214325
    16590 1gki:F (3.0) BS01 ADP ? N/A Q04230 11214325
    16591 1gki:F (3.0) BS02 ADP ? N/A Q04230 11214325
    16592 1gki:G (3.0) BS01 ADP ? N/A Q04230 11214325
    16593 1gkl:A (1.4) BS01 FER 3.2.1.8 N/A P51584 11738044
    16594 1gkl:B (1.4) BS01 FER 3.2.1.8 N/A P51584 11738044
    16595 1gkm:A (1.0) BS01 CYS 4.3.1.3 N/A N/A 11895450
    16596 1gkp:A (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16597 1gkp:A (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16598 1gkp:B (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16599 1gkp:B (1.295) BS02 ZN 3.5.2.2 GO:0005737 ... N/A 12079340
    16600 1gkp:C (1.295) BS01 ZN 3.5.2.2 GO:0005737 ... N/A 12079340

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).