SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    166201 3mp3:D (2.4) BS01 MG 4.1.3.4 GO:0000287 ... P35914 20558737
    166202 3mp3:E (2.4) BS01 MG 4.1.3.4 GO:0000287 ... P35914 20558737
    166203 3mp3:F (2.4) BS01 MG 4.1.3.4 GO:0000287 ... P35914 20558737
    166204 3mp5:B (2.25) BS01 HMG 4.1.3.4 GO:0000287 ... P35914 20558737
    166205 3mp5:B (2.25) BS02 MG 4.1.3.4 GO:0000287 ... P35914 20558737
    166206 3mp5:C (2.25) BS01 MG 4.1.3.4 GO:0000287 ... P35914 20558737
    166207 3mp6:A (1.48) BS01 peptide ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166208 3mp6:A (1.48) BS02 GLC ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166209 3mp6:A (1.48) BS03 GLC ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166210 3mp8:A (1.92) BS01 GLC ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166211 3mp8:A (1.92) BS02 GLC ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166212 3mp8:A (1.92) BS03 4BZ ? GO:0005515 ... P0AEX9
    P25554
    21685874
    166213 3mpa:A (2.1) BS01 SB2 2.7.11.24 GO:0000165 ... Q16539 N/A
    166214 3mpb:A (1.91) BS01 MN ? GO:0016853 ... Q8X5Q7 20615418
    166215 3mpb:A (1.91) BS02 FRU ? GO:0016853 ... Q8X5Q7 20615418
    166216 3mpb:B (1.91) BS01 FRU ? GO:0016853 ... Q8X5Q7 20615418
    166217 3mpb:B (1.91) BS02 MN ? GO:0016853 ... Q8X5Q7 20615418
    166218 3mpg:A (2.6) BS01 ZN 3.5.2.3 GO:0004038 ... Q81WF0 21045288
    166219 3mpg:A (2.6) BS02 ZN 3.5.2.3 GO:0004038 ... Q81WF0 21045288
    166220 3mpg:B (2.6) BS01 ZN 3.5.2.3 GO:0004038 ... Q81WF0 21045288
    166221 3mpg:B (2.6) BS02 ZN 3.5.2.3 GO:0004038 ... Q81WF0 21045288
    166222 3mph:A (2.05) BS01 CU 1.4.3.22 GO:0005507 ... P19801 20722416
    166223 3mph:A (2.05) BS02 CA 1.4.3.22 GO:0005507 ... P19801 20722416
    166224 3mph:A (2.05) BS03 CA 1.4.3.22 GO:0005507 ... P19801 20722416
    166225 3mph:B (2.05) BS01 CU 1.4.3.22 GO:0005507 ... P19801 20722416
    166226 3mph:B (2.05) BS02 CA 1.4.3.22 GO:0005507 ... P19801 20722416
    166227 3mph:B (2.05) BS03 CA 1.4.3.22 GO:0005507 ... P19801 20722416
    166228 3mpi:A (2.05) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166229 3mpi:A (2.05) BS02 GRA 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166230 3mpi:B (2.05) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166231 3mpi:B (2.05) BS02 GRA 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166232 3mpi:C (2.05) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166233 3mpi:C (2.05) BS02 GRA 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166234 3mpi:D (2.05) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166235 3mpi:D (2.05) BS02 GRA 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166236 3mpj:A (2.1) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166237 3mpj:B (2.1) BS01 peptide 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166238 3mpj:B (2.1) BS02 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166239 3mpj:D (2.1) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166240 3mpj:D (2.1) BS02 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166241 3mpj:E (2.1) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166242 3mpj:E (2.1) BS02 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166243 3mpj:F (2.1) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166244 3mpj:F (2.1) BS02 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166245 3mpj:G (2.1) BS01 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166246 3mpj:G (2.1) BS02 FAD 1.3.99.32 GO:0003995 ... C3UVB0 20486657
    166247 3mpm:A (1.95) BS01 5LK 2.7.10.2 GO:0004672 ... P06239 20483608 MOAD: ic50=30nM
    166248 3mpn:A (2.25) BS01 LEU ? GO:0005886 ... O67854 20964375
    166249 3mpn:A (2.25) BS02 MTN ? GO:0005886 ... O67854 20964375
    166250 3mpq:A (2.25) BS01 LEU ? GO:0005886 ... O67854 20964375
    166251 3mpq:A (2.25) BS02 MTN ? GO:0005886 ... O67854 20964375
    166252 3mps:A (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166253 3mps:A (2.0) BS02 FEO ? GO:0005506 ... Q9UWP7 21647777
    166254 3mps:A (2.0) BS03 FEO ? GO:0005506 ... Q9UWP7 21647777
    166255 3mps:B (2.0) BS01 FEO ? GO:0005506 ... Q9UWP7 21647777
    166256 3mps:B (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166257 3mps:B (2.0) BS03 FEO ? GO:0005506 ... Q9UWP7 21647777
    166258 3mps:D (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166259 3mps:D (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166260 3mps:D (2.0) BS03 FE ? GO:0005506 ... Q9UWP7 21647777
    166261 3mps:D (2.0) BS04 FEO ? GO:0005506 ... Q9UWP7 21647777
    166262 3mps:F (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    166263 3mps:F (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166264 3mps:F (2.0) BS03 FE ? GO:0005506 ... Q9UWP7 21647777
    166265 3mps:F (2.0) BS04 FE ? GO:0005506 ... Q9UWP7 21647777
    166266 3mps:F (2.0) BS05 FEO ? GO:0005506 ... Q9UWP7 21647777
    166267 3mps:G (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166268 3mps:G (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166269 3mps:G (2.0) BS03 FE ? GO:0005506 ... Q9UWP7 21647777
    166270 3mps:G (2.0) BS04 FE ? GO:0005506 ... Q9UWP7 21647777
    166271 3mps:H (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166272 3mps:H (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166273 3mps:H (2.0) BS03 FE ? GO:0005506 ... Q9UWP7 21647777
    166274 3mps:H (2.0) BS04 FE ? GO:0005506 ... Q9UWP7 21647777
    166275 3mps:I (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166276 3mps:I (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166277 3mps:I (2.0) BS03 FEO ? GO:0005506 ... Q9UWP7 21647777
    166278 3mps:K (2.0) BS01 FE ? GO:0005506 ... Q9UWP7 21647777
    166279 3mps:K (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    166280 3mps:K (2.0) BS03 FEO ? GO:0005506 ... Q9UWP7 21647777
    166281 3mpt:A (1.89) BS01 1GK 2.7.11.24 GO:0000165 ... Q16539 20570148 MOAD: ic50=0.25uM
    166282 3mpu:A (2.855) BS01 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166283 3mpu:A (2.855) BS02 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166284 3mpu:B (2.855) BS01 ZN ? GO:0005515 ... P0A7F3 20620149
    166285 3mpu:C (2.855) BS01 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166286 3mpu:C (2.855) BS02 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166287 3mpu:D (2.855) BS01 ZN ? GO:0005515 ... P0A7F3 20620149
    166288 3mpu:E (2.855) BS01 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166289 3mpu:E (2.855) BS02 PO4 2.1.3.2 GO:0004070 ... P0A786 20620149
    166290 3mpu:F (2.855) BS01 ZN ? GO:0005515 ... P0A7F3 20620149
    166291 3mpz:A (1.7) BS01 ZN 3.5.4.5 GO:0004126 ... A0QT11 25613812
    166292 3mpz:B (1.7) BS01 ZN 3.5.4.5 GO:0004126 ... A0QT11 25613812
    166293 3mpz:C (1.7) BS01 ZN 3.5.4.5 GO:0004126 ... A0QT11 25613812
    166294 3mpz:D (1.7) BS01 ZN 3.5.4.5 GO:0004126 ... A0QT11 25613812
    166295 3mq2:A (1.69) BS01 SAH N/A N/A P25920 20639535
    166296 3mq2:B (1.69) BS01 SAH N/A N/A P25920 20639535
    166297 3mq3:A (2.8) BS01 MN 3.1.3.43 GO:0004722 ... P35816 N/A
    166298 3mq3:A (2.8) BS02 MN 3.1.3.43 GO:0004722 ... P35816 N/A
    166299 3mq4:A (2.8) BS01 MG ? GO:0004930 ... Q14831 N/A
    166300 3mq4:A (2.8) BS02 Z99 ? GO:0004930 ... Q14831 N/A BindingDB: IC50=990nM, Ki=990nM
    166301 3mq6:A (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166302 3mq6:A (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166303 3mq6:A (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166304 3mq6:A (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166305 3mq6:B (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166306 3mq6:B (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166307 3mq6:B (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166308 3mq6:B (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166309 3mq6:C (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166310 3mq6:C (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166311 3mq6:C (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166312 3mq6:C (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166313 3mq6:D (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166314 3mq6:D (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166315 3mq6:D (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166316 3mq6:D (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166317 3mq6:E (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166318 3mq6:E (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166319 3mq6:E (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166320 3mq6:E (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166321 3mq6:F (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166322 3mq6:F (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166323 3mq6:F (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166324 3mq6:F (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166325 3mq6:G (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166326 3mq6:G (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166327 3mq6:G (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166328 3mq6:G (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166329 3mq6:H (2.0) BS01 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166330 3mq6:H (2.0) BS02 dna 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166331 3mq6:H (2.0) BS03 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166332 3mq6:H (2.0) BS04 CA 3.1.21.4 GO:0042802 ... Q9F6L0 21151881
    166333 3mq7:E (2.28) BS01 CA ? GO:0051607 ... Q10589 20940320
    166334 3mq7:K (2.28) BS01 CA ? GO:0051607 ... Q10589 20940320
    166335 3mqd:A (1.25) BS01 3MQ 2.3.1.41 GO:0004315 ... Q2YQQ9 31237717
    166336 3mqe:A (2.8) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 20709553
    166337 3mqe:A (2.8) BS02 416 1.14.99.1 GO:0001516 ... Q05769 20709553
    166338 3mqe:B (2.8) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 20709553
    166339 3mqe:B (2.8) BS02 416 1.14.99.1 GO:0001516 ... Q05769 20709553
    166340 3mqe:C (2.8) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 20709553
    166341 3mqe:C (2.8) BS02 416 1.14.99.1 GO:0001516 ... Q05769 20709553
    166342 3mqe:D (2.8) BS01 HEM 1.14.99.1 GO:0001516 ... Q05769 20709553
    166343 3mqe:D (2.8) BS02 416 1.14.99.1 GO:0001516 ... Q05769 20709553
    166344 3mqf:A (1.951) BS01 20X 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=5.7uM
    166345 3mqf:A (1.951) BS02 20X 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=5.7uM
    166346 3mqg:A (1.43) BS01 ACO 2.3.1.- N/A A9IH93 20433200
    166347 3mqg:A (1.43) BS02 U5P 2.3.1.- N/A A9IH93 20433200
    166348 3mqg:A (1.43) BS03 UDP 2.3.1.- N/A A9IH93 20433200
    166349 3mqg:A (1.43) BS04 ACO 2.3.1.- N/A A9IH93 20433200
    166350 3mqg:B (1.43) BS01 ACO 2.3.1.- N/A A9IH93 20433200
    166351 3mqg:B (1.43) BS02 ACO 2.3.1.- N/A A9IH93 20433200
    166352 3mqg:B (1.43) BS03 UDP 2.3.1.- N/A A9IH93 20433200
    166353 3mqg:B (1.43) BS04 UDP 2.3.1.- N/A A9IH93 20433200
    166354 3mqg:C (1.43) BS01 U5P 2.3.1.- N/A A9IH93 20433200
    166355 3mqg:C (1.43) BS02 ACO 2.3.1.- N/A A9IH93 20433200
    166356 3mqg:C (1.43) BS03 ACO 2.3.1.- N/A A9IH93 20433200
    166357 3mqg:C (1.43) BS04 UDP 2.3.1.- N/A A9IH93 20433200
    166358 3mqg:D (1.43) BS01 ACO 2.3.1.- N/A A9IH93 20433200
    166359 3mqg:D (1.43) BS02 U5P 2.3.1.- N/A A9IH93 20433200
    166360 3mqg:D (1.43) BS03 U5P 2.3.1.- N/A A9IH93 20433200
    166361 3mqg:D (1.43) BS04 ACO 2.3.1.- N/A A9IH93 20433200
    166362 3mqg:E (1.43) BS01 ACO 2.3.1.- N/A A9IH93 20433200
    166363 3mqg:E (1.43) BS02 ACO 2.3.1.- N/A A9IH93 20433200
    166364 3mqg:E (1.43) BS03 U5P 2.3.1.- N/A A9IH93 20433200
    166365 3mqg:E (1.43) BS04 UDP 2.3.1.- N/A A9IH93 20433200
    166366 3mqg:F (1.43) BS01 U5P 2.3.1.- N/A A9IH93 20433200
    166367 3mqg:F (1.43) BS02 ACO 2.3.1.- N/A A9IH93 20433200
    166368 3mqg:F (1.43) BS03 ACO 2.3.1.- N/A A9IH93 20433200
    166369 3mqg:F (1.43) BS04 UDP 2.3.1.- N/A A9IH93 20433200
    166370 3mqg:F (1.43) BS05 UDP 2.3.1.- N/A A9IH93 20433200
    166371 3mqh:A (1.43) BS01 MJZ 2.3.1.- N/A A9IH93 20433200
    166372 3mqh:A (1.43) BS02 COA 2.3.1.- N/A A9IH93 20433200
    166373 3mqh:A (1.43) BS03 MJZ 2.3.1.- N/A A9IH93 20433200
    166374 3mqh:A (1.43) BS04 COA 2.3.1.- N/A A9IH93 20433200
    166375 3mqh:B (1.43) BS01 COA 2.3.1.- N/A A9IH93 20433200
    166376 3mqh:B (1.43) BS02 MJZ 2.3.1.- N/A A9IH93 20433200
    166377 3mqh:B (1.43) BS03 COA 2.3.1.- N/A A9IH93 20433200
    166378 3mqh:B (1.43) BS04 MJZ 2.3.1.- N/A A9IH93 20433200
    166379 3mqh:C (1.43) BS01 MJZ 2.3.1.- N/A A9IH93 20433200
    166380 3mqh:C (1.43) BS02 COA 2.3.1.- N/A A9IH93 20433200
    166381 3mqh:C (1.43) BS03 COA 2.3.1.- N/A A9IH93 20433200
    166382 3mqh:C (1.43) BS04 MJZ 2.3.1.- N/A A9IH93 20433200
    166383 3mqh:D (1.43) BS01 MJZ 2.3.1.- N/A A9IH93 20433200
    166384 3mqh:D (1.43) BS02 COA 2.3.1.- N/A A9IH93 20433200
    166385 3mqh:D (1.43) BS03 MJZ 2.3.1.- N/A A9IH93 20433200
    166386 3mqh:D (1.43) BS04 COA 2.3.1.- N/A A9IH93 20433200
    166387 3mqh:E (1.43) BS01 COA 2.3.1.- N/A A9IH93 20433200
    166388 3mqh:E (1.43) BS02 MJZ 2.3.1.- N/A A9IH93 20433200
    166389 3mqh:E (1.43) BS03 COA 2.3.1.- N/A A9IH93 20433200
    166390 3mqh:E (1.43) BS04 MJZ 2.3.1.- N/A A9IH93 20433200
    166391 3mqh:F (1.43) BS01 MJZ 2.3.1.- N/A A9IH93 20433200
    166392 3mqh:F (1.43) BS02 COA 2.3.1.- N/A A9IH93 20433200
    166393 3mqh:F (1.43) BS03 COA 2.3.1.- N/A A9IH93 20433200
    166394 3mqh:F (1.43) BS04 MJZ 2.3.1.- N/A A9IH93 20433200
    166395 3mqk:A (2.8) BS01 rna 5.4.99.25 GO:0000495 ... Q7LWY0 21149572
    166396 3mqk:A (2.8) BS02 rna 5.4.99.25 GO:0000495 ... Q7LWY0 21149572
    166397 3mqp:A (2.24) BS01 peptide ? GO:0042981 ... Q16548 N/A
    166398 3mqr:A (1.8) BS01 peptide 3.4.19.12 N/A Q93009 N/A
    166399 3mqs:C (2.4) BS01 peptide 3.4.19.12 N/A Q93009 N/A
    166400 3mqt:A (2.1) BS01 MG ? GO:0000287 ... A8H7M5 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).