SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    166601 3mt6:U (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166602 3mt6:U (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166603 3mt6:V (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166604 3mt6:V (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166605 3mt6:W (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166606 3mt6:W (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166607 3mt6:X (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166608 3mt6:X (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166609 3mt6:Y (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166610 3mt6:Y (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166611 3mt6:Z (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166612 3mt6:Z (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166613 3mt6:a (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166614 3mt6:a (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166615 3mt6:b (1.901) BS01 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166616 3mt6:b (1.901) BS02 peptide 3.4.21.92 GO:0004176 ... P0A6G7 20851345
    166617 3mt7:A (2.0) BS01 16O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=93.2uM
    166618 3mt7:A (2.0) BS02 16O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=93.2uM
    166619 3mt8:A (2.0) BS01 17T 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=28.3uM
    166620 3mt8:A (2.0) BS02 17T 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=28.3uM
    166621 3mt9:A (2.05) BS01 18O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=25.7uM
    166622 3mt9:A (2.05) BS02 18O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=25.7uM
    166623 3mta:A (2.23) BS01 22O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=50.4uM
    166624 3mta:A (2.23) BS02 22O 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=50.4uM
    166625 3mtb:A (1.95) BS01 23V 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=23.2uM
    166626 3mtb:A (1.95) BS02 23V 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=23.2uM
    166627 3mtc:A (2.4) BS01 MG 3.1.3.36 GO:0016791 ... P32019 24704254
    166628 3mtc:A (2.4) BS02 PIF 3.1.3.36 GO:0016791 ... P32019 24704254
    166629 3mtd:A (2.096) BS01 25E 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=340.5uM
    166630 3mtd:A (2.096) BS02 25E 2.4.1.1 GO:0004645 ... P00489 20947361 MOAD: ic50=340.5uM
    166631 3mte:A (1.805) BS01 SAM 2.1.1.180 N/A A8C927 20639535
    166632 3mte:B (1.805) BS01 SAM 2.1.1.180 N/A A8C927 20639535
    166633 3mtf:A (2.15) BS01 A3F 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=35nM
    166634 3mtf:B (2.15) BS01 A3F 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=35nM
    166635 3mtg:A (2.64) BS01 NAD 3.3.1.1 N/A O43865 N/A
    166636 3mtg:A (2.64) BS02 NAD 3.3.1.1 N/A O43865 N/A
    166637 3mtg:B (2.64) BS01 NAD 3.3.1.1 N/A O43865 N/A
    166638 3mtg:B (2.64) BS02 NAD 3.3.1.1 N/A O43865 N/A
    166639 3mth:D (1.9) BS01 peptide ? GO:0005179 ... P01315 7492558
    166640 3mth:D (1.9) BS02 peptide ? GO:0005179 ... P01315 7492558
    166641 3mtl:A (2.4) BS01 FEF 2.7.11.22 GO:0004672 ... Q00536 28057719
    166642 3mtn:A (2.7) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    166643 3mtn:C (2.7) BS01 ZN 3.4.19.12 GO:0004843 ... Q9UK80 23287719
    166644 3mtw:A (1.7) BS01 ZN ? GO:0016787 ... Q9A4Z9 20604542
    166645 3mtw:A (1.7) BS02 ZN ? GO:0016787 ... Q9A4Z9 20604542
    166646 3mtw:A (1.7) BS03 M3R ? GO:0016787 ... Q9A4Z9 20604542 MOAD: Ki=92nM
    166647 3mu3:A (2.4) BS01 LP4 ? GO:0005576 ... Q90890 20534476
    166648 3mu3:A (2.4) BS02 LP5 ? GO:0005576 ... Q90890 20534476
    166649 3mu3:B (2.4) BS01 LP4 ? GO:0005576 ... Q90890 20534476
    166650 3mu3:B (2.4) BS02 LP5 ? GO:0005576 ... Q90890 20534476
    166651 3mu6:A (2.434) BS01 dna ? GO:0000977 ... Q02078 22396528
    166652 3mu6:A (2.434) BS02 dna ? GO:0000977 ... Q02078 22396528
    166653 3mu6:A (2.434) BS03 BXL ? GO:0000977 ... Q02078 22396528
    166654 3mu6:B (2.434) BS01 dna ? GO:0000977 ... Q02078 22396528
    166655 3mu6:B (2.434) BS02 dna ? GO:0000977 ... Q02078 22396528
    166656 3mu6:B (2.434) BS03 dna ? GO:0000977 ... Q02078 22396528
    166657 3mu6:B (2.434) BS04 BXL ? GO:0000977 ... Q02078 22396528
    166658 3mu6:C (2.434) BS01 dna ? GO:0000977 ... Q02078 22396528
    166659 3mu6:C (2.434) BS02 dna ? GO:0000977 ... Q02078 22396528
    166660 3mu6:D (2.434) BS01 dna ? GO:0000977 ... Q02078 22396528
    166661 3mu6:D (2.434) BS02 dna ? GO:0000977 ... Q02078 22396528
    166662 3mu6:D (2.434) BS03 dna ? GO:0000977 ... Q02078 22396528
    166663 3mua:A (1.5) BS01 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166664 3mua:A (1.5) BS02 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166665 3mua:A (1.5) BS03 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166666 3mua:B (1.5) BS01 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166667 3mua:B (1.5) BS02 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166668 3muc:A (2.3) BS01 MN 5.5.1.1 GO:0003824 ... P08310 10336378
    166669 3muc:B (2.3) BS01 MN 5.5.1.1 GO:0003824 ... P08310 10336378
    166670 3muf:A (2.3) BS01 ADP 2.7.1.71 GO:0000287 ... P56073 22438938
    166671 3muf:A (2.3) BS02 S3P 2.7.1.71 GO:0000287 ... P56073 22438938
    166672 3mui:A (1.8) BS01 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166673 3mui:A (1.8) BS02 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166674 3mui:A (1.8) BS03 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166675 3mui:A (1.8) BS04 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166676 3mui:B (1.8) BS01 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166677 3mui:B (1.8) BS02 XYP 3.2.1.8 GO:0004553 ... Q09LY9 N/A
    166678 3muk:A (1.75) BS01 peptide ? N/A Q9ESU6 20715035
    166679 3mul:A (1.65) BS01 peptide ? N/A Q9ESU6 20715035
    166680 3mum:P (2.9) BS01 rna ? GO:0003676 ... P09012 20690679
    166681 3muo:A (1.95) BS01 ZPR 3.4.21.26 GO:0004252 ... Q9X6R4 N/A
    166682 3muo:A (1.95) BS02 ZPR 3.4.21.26 GO:0004252 ... Q9X6R4 N/A
    166683 3mup:A (2.6) BS01 SMK 2.3.2.27 N/A Q13490 20954235
    166684 3mup:A (2.6) BS02 ZN 2.3.2.27 N/A Q13490 20954235
    166685 3mup:B (2.6) BS01 SMK 2.3.2.27 N/A Q13490 20954235
    166686 3mup:B (2.6) BS02 ZN 2.3.2.27 N/A Q13490 20954235
    166687 3mup:C (2.6) BS01 SMK 2.3.2.27 N/A Q13490 20954235
    166688 3mup:C (2.6) BS02 ZN 2.3.2.27 N/A Q13490 20954235
    166689 3mup:D (2.6) BS01 SMK 2.3.2.27 N/A Q13490 20954235
    166690 3mup:D (2.6) BS02 ZN 2.3.2.27 N/A Q13490 20954235
    166691 3mur:P (3.0) BS01 rna ? GO:0003676 ... P09012 20690679
    166692 3mus:A (2.0) BS01 HEM ? GO:0020037 ... P04166 21574570
    166693 3mus:B (2.0) BS01 HEM ? GO:0020037 ... P04166 21574570
    166694 3mut:P (3.0) BS01 rna ? GO:0003676 ... P09012 20690679
    166695 3muv:P (3.2) BS01 rna ? GO:0003676 ... P09012 20690679
    166696 3muy:1 (2.5) BS01 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166697 3muy:1 (2.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166698 3muy:2 (2.5) BS01 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166699 3muy:2 (2.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166700 3muy:3 (2.5) BS01 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166701 3muy:3 (2.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166702 3muy:4 (2.5) BS01 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166703 3muy:4 (2.5) BS02 MG 3.2.1.23 GO:0000287 ... P00722 21102659
    166704 3muz:1 (1.9) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166705 3muz:1 (1.9) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166706 3muz:1 (1.9) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166707 3muz:1 (1.9) BS04 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166708 3muz:2 (1.9) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166709 3muz:2 (1.9) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166710 3muz:2 (1.9) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166711 3muz:2 (1.9) BS04 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166712 3muz:3 (1.9) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166713 3muz:3 (1.9) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166714 3muz:3 (1.9) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166715 3muz:3 (1.9) BS04 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166716 3muz:4 (1.9) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166717 3muz:4 (1.9) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 N/A BindingDB: Ki=7.6e+4nM
    166718 3muz:4 (1.9) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166719 3muz:4 (1.9) BS04 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166720 3mv0:1 (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 N/A
    166721 3mv0:1 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166722 3mv0:1 (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166723 3mv0:2 (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 N/A
    166724 3mv0:2 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166725 3mv0:2 (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166726 3mv0:3 (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 N/A
    166727 3mv0:3 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166728 3mv0:3 (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166729 3mv0:4 (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 N/A
    166730 3mv0:4 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166731 3mv0:4 (2.2) BS03 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166732 3mv1:1 (2.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166733 3mv1:1 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166734 3mv1:2 (2.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166735 3mv1:2 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166736 3mv1:3 (2.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166737 3mv1:3 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166738 3mv1:4 (2.2) BS01 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166739 3mv1:4 (2.2) BS02 MG 3.2.1.23 GO:0000287 ... P00722 N/A
    166740 3mv4:M (1.59) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166741 3mv4:M (1.59) BS02 CO3 1.13.11.3 GO:0003824 ... P00437 N/A
    166742 3mv4:N (1.59) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166743 3mv4:N (1.59) BS02 CO3 1.13.11.3 GO:0003824 ... P00437 N/A
    166744 3mv4:O (1.59) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166745 3mv4:O (1.59) BS02 CO3 1.13.11.3 GO:0003824 ... P00437 N/A
    166746 3mv5:A (2.47) BS01 peptide 2.7.11.1 GO:0004672 ... P31749 20481595
    166747 3mv5:A (2.47) BS02 MN 2.7.11.1 GO:0004672 ... P31749 20481595
    166748 3mv5:A (2.47) BS03 XFE 2.7.11.1 GO:0004672 ... P31749 20481595 MOAD: ic50=180nM
    BindingDB: IC50=180nM
    166749 3mv6:M (1.86) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166750 3mv6:N (1.86) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166751 3mv6:O (1.86) BS01 FE 1.13.11.3 GO:0003824 ... P00437 N/A
    166752 3mv7:A (2.0) BS01 peptide ? N/A P01889 20566715
    166753 3mv7:D (2.0) BS01 peptide N/A N/A N/A 20566715
    166754 3mv7:E (2.0) BS01 peptide N/A N/A N/A 20566715
    166755 3mv8:A (2.1) BS01 peptide ? N/A P01889 20566715
    166756 3mv8:D (2.1) BS01 peptide N/A N/A N/A 20566715
    166757 3mv8:E (2.1) BS01 peptide N/A N/A N/A 20566715
    166758 3mv9:A (2.7) BS01 peptide ? N/A P01889 20566715
    166759 3mv9:D (2.7) BS01 peptide N/A N/A N/A 20566715
    166760 3mv9:E (2.7) BS01 peptide N/A N/A N/A 20566715
    166761 3mva:O (2.2) BS01 dna ? GO:0003676 ... Q99551 20550934
    166762 3mva:O (2.2) BS02 dna ? GO:0003676 ... Q99551 20550934
    166763 3mvb:O (2.786) BS01 dna ? GO:0003676 ... Q99551 20550934
    166764 3mvb:O (2.786) BS02 dna ? GO:0003676 ... Q99551 20550934
    166765 3mvc:A (1.401) BS01 HEM ? GO:0019825 ... Q18086 20518498
    166766 3mvc:B (1.401) BS01 HEM ? GO:0019825 ... Q18086 20518498
    166767 3mvd:A (2.9) BS01 dna ? GO:0000786 ... P84233 20739938
    166768 3mvd:A (2.9) BS02 dna ? GO:0000786 ... P84233 20739938
    166769 3mvd:B (2.9) BS01 dna ? GO:0000786 ... P62799 20739938
    166770 3mvd:B (2.9) BS02 dna ? GO:0000786 ... P62799 20739938
    166771 3mvd:C (2.9) BS01 dna ? GO:0000786 ... Q6AZJ8 20739938
    166772 3mvd:C (2.9) BS02 dna ? GO:0000786 ... Q6AZJ8 20739938
    166773 3mvd:D (2.9) BS01 dna ? GO:0000786 ... P02281 20739938
    166774 3mvd:D (2.9) BS02 dna ? GO:0000786 ... P02281 20739938
    166775 3mvd:E (2.9) BS01 dna ? GO:0000786 ... P84233 20739938
    166776 3mvd:E (2.9) BS02 dna ? GO:0000786 ... P84233 20739938
    166777 3mvd:F (2.9) BS01 dna ? GO:0000786 ... P62799 20739938
    166778 3mvd:F (2.9) BS02 dna ? GO:0000786 ... P62799 20739938
    166779 3mvd:G (2.9) BS01 dna ? GO:0000786 ... Q6AZJ8 20739938
    166780 3mvd:G (2.9) BS02 dna ? GO:0000786 ... Q6AZJ8 20739938
    166781 3mvd:H (2.9) BS01 dna ? GO:0000786 ... P02281 20739938
    166782 3mvd:H (2.9) BS02 dna ? GO:0000786 ... P02281 20739938
    166783 3mvd:K (2.9) BS01 dna ? N/A P25171 20739938
    166784 3mvd:L (2.9) BS01 dna ? N/A P25171 20739938
    166785 3mvf:A (1.4) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 20524697
    166786 3mvf:A (1.4) BS02 NO2 1.7.6.1 GO:0005576 ... Q94734 20524697
    166787 3mvh:A (2.01) BS01 peptide 2.7.11.1 GO:0004672 ... P31749 20481595
    166788 3mvh:A (2.01) BS02 MN 2.7.11.1 GO:0004672 ... P31749 20481595
    166789 3mvh:A (2.01) BS03 WFE 2.7.11.1 GO:0004672 ... P31749 20481595 MOAD: ic50=0.5nM
    BindingDB: IC50=0.5nM
    166790 3mvi:A (1.6) BS01 ZN 3.5.4.4 GO:0001666 ... P03958 20815357
    166791 3mvi:B (1.6) BS01 ZN 3.5.4.4 GO:0001666 ... P03958 20815357
    166792 3mvj:A (2.49) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 20481595
    166793 3mvj:A (2.49) BS02 peptide 2.7.11.11 GO:0000287 ... P17612 20481595
    166794 3mvj:A (2.49) BS03 XFE 2.7.11.11 GO:0000287 ... P17612 20481595 MOAD: ic50=3200nM
    166795 3mvj:B (2.49) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 20481595
    166796 3mvj:B (2.49) BS02 peptide 2.7.11.11 GO:0000287 ... P17612 20481595
    166797 3mvj:E (2.49) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 20481595
    166798 3mvj:E (2.49) BS02 XFE 2.7.11.11 GO:0000287 ... P17612 20481595 MOAD: ic50=3200nM
    166799 3mvl:A (2.8) BS01 38P 2.7.11.24 GO:0000165 ... Q16539 20804198 BindingDB: IC50=13nM
    166800 3mvl:B (2.8) BS01 38P 2.7.11.24 GO:0000165 ... Q16539 20804198 BindingDB: IC50=13nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).