SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    169001 3nhp:A (1.7) BS04 HGZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10000nM
    169002 3nhp:B (1.7) BS01 HGZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10000nM
    169003 3nhp:B (1.7) BS02 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169004 3nhp:B (1.7) BS03 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169005 3nhp:B (1.7) BS04 HGZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10000nM
    169006 3nhq:A (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169007 3nhq:B (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169008 3nhq:C (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169009 3nhq:D (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169010 3nhq:E (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169011 3nhq:F (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169012 3nhq:G (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169013 3nhq:H (2.55) BS01 BLA 2.7.13.3 GO:0006355 ... Q9HWR3 22002602
    169014 3nhr:A (1.8) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169015 3nhr:A (1.8) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169016 3nhr:A (1.8) BS03 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169017 3nhr:A (1.8) BS04 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169018 3nhr:A (1.8) BS05 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169019 3nhr:B (1.8) BS01 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169020 3nhr:B (1.8) BS02 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169021 3nhr:B (1.8) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169022 3nhr:B (1.8) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169023 3nhr:B (1.8) BS05 RZW 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169024 3nhs:A (1.78) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169025 3nhs:A (1.78) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169026 3nhs:A (1.78) BS03 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169027 3nhs:A (1.78) BS04 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169028 3nhs:B (1.78) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169029 3nhs:B (1.78) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169030 3nhs:B (1.78) BS03 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169031 3nhs:B (1.78) BS04 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169032 3nht:A (1.45) BS01 U46 ? GO:0005549 ... Q95NY5 21152418 MOAD: Kd=98nM
    169033 3nhu:A (1.9) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169034 3nhu:A (1.9) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169035 3nhu:A (1.9) BS03 M42 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169036 3nhu:A (1.9) BS04 M42 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169037 3nhu:B (1.9) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169038 3nhu:B (1.9) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169039 3nhu:B (1.9) BS03 M42 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    169040 3nhw:A (1.65) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169041 3nhw:A (1.65) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169042 3nhw:A (1.65) BS03 ZXZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=18200nM
    169043 3nhw:A (1.65) BS04 ZXZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=18200nM
    169044 3nhw:B (1.65) BS01 ZXZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=18200nM
    169045 3nhw:B (1.65) BS02 ZXZ 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=18200nM
    169046 3nhw:B (1.65) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169047 3nhw:B (1.65) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169048 3nhx:A (1.59) BS01 ASD 5.3.3.1 GO:0004769 ... P00947 N/A
    169049 3nhy:A (1.9) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169050 3nhy:A (1.9) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169051 3nhy:A (1.9) BS03 A7B 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=24100nM
    169052 3nhy:B (1.9) BS01 A7B 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=24100nM
    169053 3nhy:B (1.9) BS02 A7B 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=24100nM
    169054 3nhy:B (1.9) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    169055 3nhy:B (1.9) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    169056 3nhz:B (2.5) BS01 MG ? GO:0000160 ... P9WGM7 20702407
    169057 3nhz:C (2.5) BS01 MG ? GO:0000160 ... P9WGM7 20702407
    169058 3nhz:D (2.5) BS01 MG ? GO:0000160 ... P9WGM7 20702407
    169059 3ni2:A (1.9) BS01 AYL 6.2.1.12 GO:0003824 ... Q941M3 20841425
    169060 3ni5:A (2.1) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 21549597
    169061 3ni5:A (2.1) BS02 C1H 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 21549597 MOAD: Ki=28nM
    BindingDB: Ki=28nM
    169062 3nia:A (1.65) BS01 TBE 3.5.2.6 GO:0008800 ... Q93F76 N/A
    169063 3nia:A (1.65) BS02 TF7 3.5.2.6 GO:0008800 ... Q93F76 N/A
    169064 3nic:A (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169065 3nic:A (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169066 3nic:B (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169067 3nic:B (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169068 3nic:C (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169069 3nic:C (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169070 3nic:D (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169071 3nic:D (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169072 3nic:E (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169073 3nic:E (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169074 3nic:F (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169075 3nic:F (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169076 3nic:G (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169077 3nic:G (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169078 3nic:H (2.8) BS01 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169079 3nic:H (2.8) BS02 dna 3.1.21.4 GO:0042802 ... Q46944 20800503
    169080 3nid:A (2.3) BS01 CA ? GO:0007155 ... P08514 20679525
    169081 3nid:A (2.3) BS02 CA ? GO:0007155 ... P08514 20679525
    169082 3nid:A (2.3) BS03 CA ? GO:0007155 ... P08514 20679525
    169083 3nid:A (2.3) BS04 CA ? GO:0007155 ... P08514 20679525
    169084 3nid:B (2.3) BS01 MG ? N/A P05106 20679525
    169085 3nid:B (2.3) BS02 CA ? N/A P05106 20679525
    169086 3nid:B (2.3) BS03 CA ? N/A P05106 20679525
    169087 3nid:C (2.3) BS01 CA ? GO:0007155 ... P08514 20679525
    169088 3nid:C (2.3) BS02 CA ? GO:0007155 ... P08514 20679525
    169089 3nid:C (2.3) BS03 CA ? GO:0007155 ... P08514 20679525
    169090 3nid:C (2.3) BS04 CA ? GO:0007155 ... P08514 20679525
    169091 3nid:D (2.3) BS01 MG ? N/A P05106 20679525
    169092 3nid:D (2.3) BS02 CA ? N/A P05106 20679525
    169093 3nid:D (2.3) BS03 CA ? N/A P05106 20679525
    169094 3nie:A (2.3) BS01 ANP 2.7.11.24 GO:0004672 ... Q7KQK7 N/A
    169095 3nie:B (2.3) BS01 ANP 2.7.11.24 GO:0004672 ... Q7KQK7 N/A
    169096 3nif:A (2.4) BS01 CA ? GO:0007155 ... P08514 20679525
    169097 3nif:A (2.4) BS02 CA ? GO:0007155 ... P08514 20679525
    169098 3nif:A (2.4) BS03 CA ? GO:0007155 ... P08514 20679525
    169099 3nif:A (2.4) BS04 CA ? GO:0007155 ... P08514 20679525
    169100 3nif:A (2.4) BS05 NIF ? GO:0007155 ... P08514 20679525 BindingDB: IC50=9700nM
    169101 3nif:B (2.4) BS01 MG ? N/A P05106 20679525
    169102 3nif:B (2.4) BS02 CA ? N/A P05106 20679525
    169103 3nif:B (2.4) BS03 CA ? N/A P05106 20679525
    169104 3nif:C (2.4) BS01 CA ? GO:0007155 ... P08514 20679525
    169105 3nif:C (2.4) BS02 CA ? GO:0007155 ... P08514 20679525
    169106 3nif:C (2.4) BS03 CA ? GO:0007155 ... P08514 20679525
    169107 3nif:C (2.4) BS04 CA ? GO:0007155 ... P08514 20679525
    169108 3nif:C (2.4) BS05 NIF ? GO:0007155 ... P08514 20679525 BindingDB: IC50=9700nM
    169109 3nif:D (2.4) BS01 MG ? N/A P05106 20679525
    169110 3nif:D (2.4) BS02 CA ? N/A P05106 20679525
    169111 3nif:D (2.4) BS03 CA ? N/A P05106 20679525
    169112 3nig:A (2.25) BS01 CA ? GO:0007155 ... P08514 20679525
    169113 3nig:A (2.25) BS02 CA ? GO:0007155 ... P08514 20679525
    169114 3nig:A (2.25) BS03 CA ? GO:0007155 ... P08514 20679525
    169115 3nig:A (2.25) BS04 CA ? GO:0007155 ... P08514 20679525
    169116 3nig:B (2.25) BS01 MG ? N/A P05106 20679525
    169117 3nig:B (2.25) BS02 CA ? N/A P05106 20679525
    169118 3nig:B (2.25) BS03 CA ? N/A P05106 20679525
    169119 3nig:C (2.25) BS01 CA ? GO:0007155 ... P08514 20679525
    169120 3nig:C (2.25) BS02 CA ? GO:0007155 ... P08514 20679525
    169121 3nig:C (2.25) BS03 CA ? GO:0007155 ... P08514 20679525
    169122 3nig:C (2.25) BS04 CA ? GO:0007155 ... P08514 20679525
    169123 3nig:D (2.25) BS01 MG ? N/A P05106 20679525
    169124 3nig:D (2.25) BS02 CA ? N/A P05106 20679525
    169125 3nig:D (2.25) BS03 CA ? N/A P05106 20679525
    169126 3nih:A (2.1) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169127 3nih:A (2.1) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169128 3nih:A (2.1) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169129 3nih:A (2.1) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169130 3nii:A (2.1) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169131 3nii:A (2.1) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169132 3nii:A (2.1) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169133 3nii:A (2.1) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169134 3nij:A (2.1) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169135 3nij:A (2.1) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169136 3nij:A (2.1) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169137 3nij:A (2.1) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169138 3nik:A (1.85) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169139 3nik:A (1.85) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169140 3nik:A (1.85) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169141 3nik:B (1.85) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169142 3nik:B (1.85) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169143 3nik:B (1.85) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169144 3nik:B (1.85) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169145 3nik:D (1.85) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169146 3nik:D (1.85) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169147 3nik:D (1.85) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169148 3nik:D (1.85) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169149 3nik:F (1.85) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169150 3nik:F (1.85) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169151 3nik:F (1.85) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169152 3nil:A (1.75) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169153 3nil:A (1.75) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169154 3nil:A (1.75) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169155 3nil:B (1.75) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169156 3nil:B (1.75) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169157 3nil:B (1.75) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169158 3nil:D (1.75) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169159 3nil:D (1.75) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169160 3nil:D (1.75) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169161 3nil:D (1.75) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169162 3nil:F (1.75) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169163 3nil:F (1.75) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169164 3nil:F (1.75) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169165 3nim:A (2.0) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169166 3nim:A (2.0) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169167 3nim:A (2.0) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169168 3nim:B (2.0) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169169 3nim:B (2.0) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169170 3nim:B (2.0) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169171 3nim:B (2.0) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169172 3nim:D (2.0) BS01 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169173 3nim:D (2.0) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169174 3nim:D (2.0) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169175 3nim:F (2.0) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169176 3nim:F (2.0) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169177 3nim:F (2.0) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169178 3nim:F (2.0) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169179 3nin:A (2.1) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169180 3nin:A (2.1) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169181 3nin:A (2.1) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169182 3nin:A (2.1) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169183 3nin:B (2.1) BS01 peptide 2.3.2.27 GO:0008270 ... P19812 20835240
    169184 3nin:B (2.1) BS02 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169185 3nin:B (2.1) BS03 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169186 3nin:B (2.1) BS04 ZN 2.3.2.27 GO:0008270 ... P19812 20835240
    169187 3nio:A (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169188 3nio:A (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169189 3nio:B (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169190 3nio:B (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169191 3nio:C (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169192 3nio:C (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169193 3nio:D (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169194 3nio:D (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169195 3nio:E (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169196 3nio:E (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169197 3nio:F (2.0) BS01 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169198 3nio:F (2.0) BS02 MN 3.5.3.7 GO:0006527 ... Q9I3S3 21600989
    169199 3nip:B (2.5) BS01 16D 3.5.3.17 GO:0008783 ... Q9I6K2 21600989
    169200 3nip:B (2.5) BS02 16D 3.5.3.17 GO:0008783 ... Q9I6K2 21600989

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).