SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    170801 3o2g:A (1.78) BS01 ZN 1.14.11.1 GO:0005506 ... O75936 21168767
    170802 3o2g:A (1.78) BS02 ZN 1.14.11.1 GO:0005506 ... O75936 21168767
    170803 3o2g:A (1.78) BS03 NM2 1.14.11.1 GO:0005506 ... O75936 21168767
    170804 3o2h:A (1.7) BS01 peptide ? GO:0005515 ... P0A8Q6 21777811
    170805 3o2k:A (2.4) BS01 DST 2.5.1.106
    3.4.11.17
    GO:0004659 ... Q4WAW7 21105662
    170806 3o2k:A (2.4) BS02 QRP 2.5.1.106
    3.4.11.17
    GO:0004659 ... Q4WAW7 21105662
    170807 3o2m:A (2.7) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 21090814
    170808 3o2m:A (2.7) BS02 46A 2.7.11.24 GO:0004672 ... P45983 21090814
    170809 3o2m:A (2.7) BS03 46A 2.7.11.24 GO:0004672 ... P45983 21090814
    170810 3o2m:B (2.7) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 21090814
    170811 3o2m:B (2.7) BS02 46A 2.7.11.24 GO:0004672 ... P45983 21090814
    170812 3o2m:B (2.7) BS03 46A 2.7.11.24 GO:0004672 ... P45983 21090814
    170813 3o2n:A (1.6) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    170814 3o2n:A (1.6) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    170815 3o2n:A (1.6) BS03 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    170816 3o2n:A (1.6) BS04 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    170817 3o2n:B (1.6) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 N/A
    170818 3o2n:B (1.6) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 N/A
    170819 3o2n:B (1.6) BS03 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    170820 3o2n:B (1.6) BS04 MZX 1.10.5.1 GO:0001512 ... P16083 N/A BindingDB: IC50=10800nM
    170821 3o2q:E (2.4) BS01 peptide 3.1.3.16 GO:0004721 ... Q9NP77 20861839
    170822 3o2w:H (2.55) BS01 O2W N/A N/A N/A N/A
    170823 3o2w:L (2.55) BS01 O2W N/A N/A N/A N/A
    170824 3o2x:A (1.9) BS01 3O2 3.4.24.- GO:0004222 ... P45452 N/A BindingDB: Ki=0.130000nM
    170825 3o2x:A (1.9) BS02 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170826 3o2x:A (1.9) BS03 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170827 3o2x:A (1.9) BS04 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170828 3o2x:A (1.9) BS05 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170829 3o2x:B (1.9) BS01 3O2 3.4.24.- GO:0004222 ... P45452 N/A BindingDB: Ki=0.130000nM
    170830 3o2x:B (1.9) BS02 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170831 3o2x:B (1.9) BS03 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170832 3o2x:B (1.9) BS04 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170833 3o2x:B (1.9) BS05 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170834 3o2x:C (1.9) BS01 3O2 3.4.24.- GO:0004222 ... P45452 N/A BindingDB: Ki=0.130000nM
    170835 3o2x:C (1.9) BS02 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170836 3o2x:C (1.9) BS03 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170837 3o2x:C (1.9) BS04 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170838 3o2x:C (1.9) BS05 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170839 3o2x:D (1.9) BS01 3O2 3.4.24.- GO:0004222 ... P45452 N/A BindingDB: Ki=0.130000nM
    170840 3o2x:D (1.9) BS02 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170841 3o2x:D (1.9) BS03 ZN 3.4.24.- GO:0004222 ... P45452 N/A
    170842 3o2x:D (1.9) BS04 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170843 3o2x:D (1.9) BS05 CA 3.4.24.- GO:0004222 ... P45452 N/A
    170844 3o31:A (1.7) BS01 3O3 ? GO:0030410 ... O26771 21487608
    170845 3o31:B (1.7) BS01 3O3 ? GO:0030410 ... O26771 21487608
    170846 3o32:A (2.85) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    170847 3o32:A (2.85) BS02 35C 1.13.11.- GO:0003824 ... O67987 23261399
    170848 3o32:B (2.85) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    170849 3o33:A (2.0) BS01 ZN 2.3.2.27 N/A O15164 21164480
    170850 3o33:A (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170851 3o33:B (2.0) BS01 ZN 2.3.2.27 N/A O15164 21164480
    170852 3o33:B (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170853 3o33:C (2.0) BS01 ZN 2.3.2.27 N/A O15164 21164480
    170854 3o33:C (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170855 3o33:D (2.0) BS01 ZN 2.3.2.27 N/A O15164 21164480
    170856 3o33:D (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170857 3o34:A (1.9) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170858 3o34:A (1.9) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170859 3o34:A (1.9) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170860 3o35:A (1.76) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170861 3o35:A (1.76) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170862 3o35:A (1.76) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170863 3o35:B (1.76) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170864 3o35:B (1.76) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170865 3o35:B (1.76) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170866 3o36:A (1.7) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170867 3o36:A (1.7) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170868 3o36:A (1.7) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170869 3o36:B (1.7) BS01 ZN 2.3.2.27 N/A O15164 21164480
    170870 3o36:B (1.7) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170871 3o37:A (2.0) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170872 3o37:A (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170873 3o37:A (2.0) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170874 3o37:B (2.0) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170875 3o37:B (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170876 3o37:B (2.0) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170877 3o37:C (2.0) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170878 3o37:C (2.0) BS02 peptide 2.3.2.27 N/A O15164 21164480
    170879 3o37:C (2.0) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170880 3o37:C (2.0) BS04 ZN 2.3.2.27 N/A O15164 21164480
    170881 3o37:D (2.0) BS01 peptide 2.3.2.27 N/A O15164 21164480
    170882 3o37:D (2.0) BS02 ZN 2.3.2.27 N/A O15164 21164480
    170883 3o37:D (2.0) BS03 ZN 2.3.2.27 N/A O15164 21164480
    170884 3o3a:A (1.8) BS01 peptide ? N/A P04439 20806940
    170885 3o3a:D (1.8) BS01 peptide ? N/A P04439 20806940
    170886 3o3b:A (1.9) BS01 peptide ? N/A P04439 20806940
    170887 3o3b:D (1.9) BS01 peptide ? N/A P04439 20806940
    170888 3o3c:A (3.512) BS01 UDP 2.4.1.11 GO:0004373 ... P27472 20876143
    170889 3o3c:B (3.512) BS01 UDP 2.4.1.11 GO:0004373 ... P27472 20876143
    170890 3o3c:C (3.512) BS01 UDP 2.4.1.11 GO:0004373 ... P27472 20876143
    170891 3o3c:D (3.512) BS01 UDP 2.4.1.11 GO:0004373 ... P27472 20876143
    170892 3o3d:A (1.7) BS01 peptide ? N/A P04439 20806940
    170893 3o3d:D (1.7) BS01 peptide ? N/A P04439 20806940
    170894 3o3e:A (1.85) BS01 peptide ? N/A P04439 20806940
    170895 3o3e:D (1.85) BS01 peptide ? N/A P04439 20806940
    170896 3o3f:A (2.0) BS01 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170897 3o3f:A (2.0) BS02 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170898 3o3f:A (2.0) BS03 MG 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170899 3o3g:A (2.1) BS01 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170900 3o3g:A (2.1) BS02 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170901 3o3g:A (2.1) BS03 CA 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170902 3o3g:A (2.1) BS04 CA 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170903 3o3h:A (2.8) BS01 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170904 3o3h:A (2.8) BS02 dna 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170905 3o3h:A (2.8) BS03 MN 3.1.26.4 GO:0003676 ... Q9X017 21095591
    170906 3o3i:X (2.801) BS01 rna 3.1.26.- GO:0003723 ... Q96J94 21193640
    170907 3o3j:A (3.0) BS01 ZN 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676
    170908 3o3j:A (3.0) BS02 ZN 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676
    170909 3o3j:A (3.0) BS03 ZN 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676
    170910 3o3j:A (3.0) BS04 ZN 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676
    170911 3o3j:A (3.0) BS05 BB4 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676
    170912 3o3l:A (1.85) BS01 4IP ? N/A Q7WUJ1 N/A
    170913 3o3l:B (1.85) BS01 4IP ? N/A Q7WUJ1 N/A
    170914 3o3m:A (1.82) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170915 3o3m:B (1.82) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U923 21366233
    170916 3o3m:C (1.82) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170917 3o3m:D (1.82) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U923 21366233
    170918 3o3n:A (2.3) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170919 3o3n:A (2.3) BS02 IRC 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170920 3o3n:B (2.3) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U923 21366233
    170921 3o3n:C (2.3) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170922 3o3n:C (2.3) BS02 IRC 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170923 3o3n:D (2.3) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U923 21366233
    170924 3o3o:A (2.0) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170925 3o3o:A (2.0) BS02 2RH 4.2.1.157 GO:0006551 ... Q5U924 21366233
    170926 3o3o:B (2.0) BS01 SF4 4.2.1.157 GO:0006551 ... Q5U923 21366233
    170927 3o3p:A (2.529) BS01 MG 2.4.1.266 N/A B7SY86 21166895
    170928 3o3p:A (2.529) BS02 MG 2.4.1.266 N/A B7SY86 21166895
    170929 3o3p:A (2.529) BS03 GDD 2.4.1.266 N/A B7SY86 21166895
    170930 3o3p:B (2.529) BS01 GDP 2.4.1.266 N/A B7SY86 21166895
    170931 3o3r:A (1.86) BS01 NAP 1.1.1.21 GO:0004032 ... Q5RJP0 21168333
    170932 3o3r:B (1.86) BS01 NAP 1.1.1.21 GO:0004032 ... Q5RJP0 21168333
    170933 3o3u:N (1.497) BS01 GLC ? GO:0005515 ... P0AEX9
    Q15109
    20943659
    170934 3o3u:N (1.497) BS02 GLC ? GO:0005515 ... P0AEX9
    Q15109
    20943659
    170935 3o3u:N (1.497) BS03 GLC ? GO:0005515 ... P0AEX9
    Q15109
    20943659
    170936 3o41:A (1.95) BS01 peptide N/A N/A N/A 20881049
    170937 3o41:A (1.95) BS02 peptide N/A N/A N/A 20881049
    170938 3o41:B (1.95) BS01 peptide N/A N/A N/A 20881049
    170939 3o41:H (1.95) BS01 peptide N/A N/A N/A 20881049
    170940 3o41:L (1.95) BS01 peptide N/A N/A N/A 20881049
    170941 3o45:A (2.872) BS01 peptide N/A N/A N/A 20881049
    170942 3o45:B (2.872) BS01 peptide N/A N/A N/A 20881049
    170943 3o45:H (2.872) BS01 peptide N/A N/A N/A 20881049
    170944 3o45:L (2.872) BS01 peptide N/A N/A N/A 20881049
    170945 3o47:A (2.8) BS01 ZN ?
    3.6.5.2
    GO:0000139 ... P84077
    Q8N6T3
    N/A
    170946 3o47:A (2.8) BS02 GDP ?
    3.6.5.2
    GO:0000139 ... P84077
    Q8N6T3
    N/A
    170947 3o47:B (2.8) BS01 ZN ?
    3.6.5.2
    GO:0000139 ... P84077
    Q8N6T3
    N/A
    170948 3o47:B (2.8) BS02 GDP ?
    3.6.5.2
    GO:0000139 ... P84077
    Q8N6T3
    N/A
    170949 3o4k:A (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594
    170950 3o4k:C (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594 MOAD: Kd=24nM
    170951 3o4k:D (2.11) BS01 LTC ? GO:0001818 ... Q9GK12 21454594
    170952 3o4l:A (2.54) BS01 peptide ? N/A P04439 21124993
    170953 3o4l:D (2.54) BS01 peptide ? N/A P01848 21124993
    170954 3o4l:E (2.54) BS01 peptide ? N/A P01850 21124993
    170955 3o4m:A (2.5) BS01 CA 3.1.1.4 GO:0002446 ... P00592 21995306
    170956 3o4m:A (2.5) BS02 CA 3.1.1.4 GO:0002446 ... P00592 21995306
    170957 3o4m:A (2.5) BS03 CAQ 3.1.1.4 GO:0002446 ... P00592 21995306
    170958 3o4n:A (1.8) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... O92956 21857987
    170959 3o4n:B (1.8) BS01 ZN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0003676 ... O92956 21857987
    170960 3o4p:A (0.85) BS01 DXE 3.8.2.2 GO:0005509 ... Q7SIG4 23915572
    170961 3o4p:A (0.85) BS02 DXE 3.8.2.2 GO:0005509 ... Q7SIG4 23915572
    170962 3o4p:A (0.85) BS03 MXE 3.8.2.2 GO:0005509 ... Q7SIG4 23915572
    170963 3o4p:A (0.85) BS04 CA 3.8.2.2 GO:0005509 ... Q7SIG4 23915572
    170964 3o4p:A (0.85) BS05 CA 3.8.2.2 GO:0005509 ... Q7SIG4 23915572
    170965 3o4r:A (1.7) BS01 NAP 1.1.1.184 GO:0000253 ... Q9BTZ2 N/A
    170966 3o4r:B (1.7) BS01 NAP 1.1.1.184 GO:0000253 ... Q9BTZ2 N/A
    170967 3o4r:C (1.7) BS01 NAP 1.1.1.184 GO:0000253 ... Q9BTZ2 N/A
    170968 3o4r:D (1.7) BS01 NAP 1.1.1.184 GO:0000253 ... Q9BTZ2 N/A
    170969 3o4v:A (1.75) BS01 4CT 3.2.2.9 GO:0003824 ... P0AF12 N/A BindingDB: Kd=0.000047nM
    170970 3o4v:A (1.75) BS02 4CT 3.2.2.9 GO:0003824 ... P0AF12 N/A BindingDB: Kd=0.000047nM
    170971 3o4v:B (1.75) BS01 4CT 3.2.2.9 GO:0003824 ... P0AF12 N/A BindingDB: Kd=0.000047nM
    170972 3o4y:A (2.2) BS01 CA 2.7.11.1 GO:0005509 ... A5KBB4 N/A
    170973 3o4y:A (2.2) BS02 CA 2.7.11.1 GO:0005509 ... A5KBB4 N/A
    170974 3o50:A (2.0) BS01 LJE 2.7.11.1 GO:0000212 ... O14965 20684549
    170975 3o50:B (2.0) BS01 LJE 2.7.11.1 GO:0000212 ... O14965 20684549
    170976 3o51:A (3.2) BS01 LJF 2.7.11.1 GO:0000212 ... O14965 20684549
    170977 3o55:A (1.9) BS01 FAD 1.8.3.2 GO:0016971 ... P55789 21383138
    170978 3o56:A (2.42) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 20732811
    170979 3o56:A (2.42) BS02 ZG1 3.1.4.53 GO:0004114 ... Q07343 20732811 MOAD: ic50=794pM
    170980 3o57:A (2.0) BS01 ZN 3.1.4.53 GO:0004114 ... Q07343 20732811
    170981 3o57:A (2.0) BS02 ZG2 3.1.4.53 GO:0004114 ... Q07343 20732811 MOAD: ic50=79.4pM
    170982 3o5a:A (1.72) BS01 SF4 1.9.6.1 GO:0005506 ... P39185 21419779
    170983 3o5a:A (1.72) BS02 MGD 1.9.6.1 GO:0005506 ... P39185 21419779
    170984 3o5a:A (1.72) BS03 MGD 1.9.6.1 GO:0005506 ... P39185 21419779
    170985 3o5a:B (1.72) BS01 HEC 1.9.6.1 GO:0009061 ... P39186 21419779
    170986 3o5a:B (1.72) BS02 HEC 1.9.6.1 GO:0009061 ... P39186 21419779
    170987 3o5b:A (1.97) BS01 BGC 2.7.1.1 GO:0001678 ... P33284 20943665
    170988 3o5b:B (1.97) BS01 BGC 2.7.1.1 GO:0001678 ... P33284 20943665
    170989 3o5c:A (1.8) BS01 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170990 3o5c:A (1.8) BS02 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170991 3o5c:A (1.8) BS03 CA 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170992 3o5c:B (1.8) BS01 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170993 3o5c:B (1.8) BS02 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170994 3o5c:B (1.8) BS03 CA 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170995 3o5c:C (1.8) BS01 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170996 3o5c:C (1.8) BS02 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170997 3o5c:C (1.8) BS03 CA 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170998 3o5c:C (1.8) BS04 BU3 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    170999 3o5c:D (1.8) BS01 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    171000 3o5c:D (1.8) BS02 HEM 1.11.1.5 GO:0004130 ... Q8EF24 21742904

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).