SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    171001 3o5c:D (1.8) BS03 CA 1.11.1.5 GO:0004130 ... Q8EF24 21742904
    171002 3o5f:A (1.65) BS01 CO3 5.2.1.8 GO:0003755 ... Q13451 21636895
    171003 3o5n:E (1.83) BS01 BR0 ? N/A Q4ACU6 21626699 MOAD: Ki=17.2uM
    171004 3o5r:A (1.1) BS01 FK5 5.2.1.8 GO:0003755 ... Q13451 21636895 BindingDB: Ki=79nM
    171005 3o5s:A (2.2) BS01 CA 3.2.1.73 GO:0004553 ... P04957 N/A
    171006 3o5t:A (2.09) BS01 MG 3.2.2.24 GO:0047407 ... A7XNI2 22074780
    171007 3o5t:A (2.09) BS02 MG 3.2.2.24 GO:0047407 ... A7XNI2 22074780
    171008 3o5t:B (2.09) BS01 ADP ? GO:0005524 ... P70731 22074780
    171009 3o5u:A (2.35) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171010 3o5u:B (2.35) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171011 3o5w:A (2.7) BS01 H35 3.2.2.22 GO:0017148 ... P81446 22064121
    171012 3o5x:A (2.0) BS01 JZG 3.1.3.48 GO:0004725 ... Q06124 20170098 MOAD: ic50=5.5uM
    BindingDB: IC50=5500nM, Ki=5200nM
    171013 3o61:A (2.45) BS01 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171014 3o61:A (2.45) BS02 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171015 3o61:A (2.45) BS03 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171016 3o61:B (2.45) BS01 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171017 3o61:B (2.45) BS02 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171018 3o61:B (2.45) BS03 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171019 3o61:C (2.45) BS01 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171020 3o61:C (2.45) BS02 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171021 3o61:C (2.45) BS03 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171022 3o61:D (2.45) BS01 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171023 3o61:D (2.45) BS02 GDD 3.6.1.- GO:0000287 ... P37128 21638333
    171024 3o61:D (2.45) BS03 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171025 3o62:A (3.216) BS01 dna ? GO:0000786 ... P84233 21168769
    171026 3o62:A (3.216) BS02 dna ? GO:0000786 ... P84233 21168769
    171027 3o62:B (3.216) BS01 dna ? GO:0000786 ... P62799 21168769
    171028 3o62:B (3.216) BS02 dna ? GO:0000786 ... P62799 21168769
    171029 3o62:C (3.216) BS01 dna ? GO:0000786 ... P06897 21168769
    171030 3o62:C (3.216) BS02 dna ? GO:0000786 ... P06897 21168769
    171031 3o62:D (3.216) BS01 dna ? GO:0000786 ... P02281 21168769
    171032 3o62:D (3.216) BS02 dna ? GO:0000786 ... P02281 21168769
    171033 3o62:E (3.216) BS01 dna ? GO:0000786 ... P84233 21168769
    171034 3o62:E (3.216) BS02 dna ? GO:0000786 ... P84233 21168769
    171035 3o62:F (3.216) BS01 dna ? GO:0000786 ... P62799 21168769
    171036 3o62:F (3.216) BS02 dna ? GO:0000786 ... P62799 21168769
    171037 3o62:G (3.216) BS01 dna ? GO:0000786 ... P06897 21168769
    171038 3o62:G (3.216) BS02 dna ? GO:0000786 ... P06897 21168769
    171039 3o62:H (3.216) BS01 dna ? GO:0000786 ... P02281 21168769
    171040 3o62:H (3.216) BS02 dna ? GO:0000786 ... P02281 21168769
    171041 3o64:A (1.88) BS01 INN 3.4.24.86 GO:0004222 ... P78536 21458257
    171042 3o64:A (1.88) BS02 ZN 3.4.24.86 GO:0004222 ... P78536 21458257
    171043 3o64:A (1.88) BS03 CA 3.4.24.86 GO:0004222 ... P78536 21458257
    171044 3o64:B (1.88) BS01 786 3.4.24.86 GO:0004222 ... P78536 21458257 MOAD: Ki=0.4nM
    BindingDB: IC50=720nM, Ki=0.400000nM
    171045 3o64:B (1.88) BS02 ZN 3.4.24.86 GO:0004222 ... P78536 21458257
    171046 3o69:A (2.1) BS01 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171047 3o69:B (2.1) BS01 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171048 3o6d:A (1.95) BS01 PXP 2.6.99.2 GO:0005737 ... Q9PN59 N/A
    171049 3o6e:X (2.904) BS01 rna 3.1.26.- GO:0003723 ... Q96J94 21193640
    171050 3o6g:A (1.8) BS01 GLU ? GO:0015276 ... P19491 20817521
    171051 3o6g:A (1.8) BS02 O27 ? GO:0015276 ... P19491 20817521
    171052 3o6h:A (2.1) BS01 GLU ? GO:0015276 ... P19491 20817521
    171053 3o6h:A (2.1) BS02 O25 ? GO:0015276 ... P19491 20817521
    171054 3o6i:A (1.8) BS01 GLU ? GO:0015276 ... P19491 20817521
    171055 3o6i:A (1.8) BS02 O26 ? GO:0015276 ... P19491 20817521
    171056 3o6j:A (2.9) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171057 3o6j:A (2.9) BS02 HQN 1.13.11.- GO:0003824 ... O67987 23261399
    171058 3o6j:B (2.9) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171059 3o6l:H (2.1) BS01 peptide N/A N/A N/A 21035463
    171060 3o6l:L (2.1) BS01 peptide N/A N/A N/A 21035463
    171061 3o6m:H (2.4) BS01 peptide N/A N/A N/A 21035463
    171062 3o6m:L (2.4) BS01 peptide N/A N/A N/A 21035463
    171063 3o6o:A (2.0) BS01 94M ? GO:0005524 ... Q389P1 24147171
    171064 3o6o:B (2.0) BS01 94M ? GO:0005524 ... Q389P1 24147171
    171065 3o6r:A (2.6) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171066 3o6r:A (2.6) BS02 PYG 1.13.11.- GO:0003824 ... O67987 23261399
    171067 3o6r:B (2.6) BS01 FE 1.13.11.- GO:0003824 ... O67987 23261399
    171068 3o6r:B (2.6) BS02 PYG 1.13.11.- GO:0003824 ... O67987 23261399
    171069 3o6t:A (2.4) BS01 PX5 ? GO:0005576 ... P9WG67 20981751
    171070 3o6t:B (2.4) BS01 PX5 ? GO:0005576 ... P9WG67 20981751
    171071 3o6t:C (2.4) BS01 PX5 ? GO:0005576 ... P9WG67 20981751
    171072 3o6t:D (2.4) BS01 PX5 ? GO:0005576 ... P9WG67 20981751
    171073 3o6x:A (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171074 3o6x:A (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171075 3o6x:A (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171076 3o6x:A (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171077 3o6x:B (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171078 3o6x:B (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171079 3o6x:B (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171080 3o6x:B (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171081 3o6x:C (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171082 3o6x:C (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171083 3o6x:C (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171084 3o6x:C (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171085 3o6x:D (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171086 3o6x:D (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171087 3o6x:D (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171088 3o6x:D (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171089 3o6x:E (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171090 3o6x:E (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171091 3o6x:E (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171092 3o6x:E (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171093 3o6x:F (3.5) BS01 MG ? GO:0003824 ... Q5LGP1 21481771
    171094 3o6x:F (3.5) BS02 MG ? GO:0003824 ... Q5LGP1 21481771
    171095 3o6x:F (3.5) BS03 P3S ? GO:0003824 ... Q5LGP1 21481771
    171096 3o6x:F (3.5) BS04 ADP ? GO:0003824 ... Q5LGP1 21481771
    171097 3o6z:A (2.05) BS01 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171098 3o6z:B (2.05) BS01 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171099 3o6z:B (2.05) BS02 MG 3.6.1.- GO:0000287 ... P37128 21638333
    171100 3o70:A (1.85) BS01 ZN ? GO:0016627 ... Q86YI8 27223324
    171101 3o70:A (1.85) BS02 ZN ? GO:0016627 ... Q86YI8 27223324
    171102 3o71:A (1.95) BS01 peptide 2.7.11.24 GO:0000165 ... P63086 21070949
    171103 3o72:A (1.95) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171104 3o72:A (1.95) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171105 3o72:B (1.95) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171106 3o72:B (1.95) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171107 3o72:C (1.95) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171108 3o72:C (1.95) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171109 3o72:D (1.95) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171110 3o72:D (1.95) BS02 OXY 1.11.1.-
    4.98.1.1
    GO:0004325 ... Q8XAS4 21324904
    171111 3o73:A (2.0) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 21506232
    171112 3o73:A (2.0) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 21506232
    171113 3o73:A (2.0) BS03 O73 1.10.5.1 GO:0001512 ... P16083 21506232 MOAD: Kd=19uM
    171114 3o73:A (2.0) BS04 O73 1.10.5.1 GO:0001512 ... P16083 21506232 MOAD: Kd=19uM
    171115 3o73:B (2.0) BS01 O73 1.10.5.1 GO:0001512 ... P16083 21506232
    171116 3o73:B (2.0) BS02 O73 1.10.5.1 GO:0001512 ... P16083 21506232
    171117 3o73:B (2.0) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 21506232
    171118 3o73:B (2.0) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 21506232
    171119 3o75:A (2.3) BS01 F1X ? GO:0003677 ... Q88PQ6 21239488 MOAD: Kd=209nM
    171120 3o75:B (2.3) BS01 F1X ? GO:0003677 ... Q88PQ6 21239488 MOAD: Kd=209nM
    171121 3o76:A (1.77) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 21134126
    171122 3o76:B (1.77) BS01 GTB 2.5.1.18 GO:0000122 ... P19157 21134126
    171123 3o77:A (2.35) BS01 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171124 3o77:A (2.35) BS02 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171125 3o78:A (2.6) BS01 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171126 3o78:A (2.6) BS02 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171127 3o78:A (2.6) BS03 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171128 3o78:A (2.6) BS04 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171129 3o78:B (2.6) BS01 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171130 3o78:B (2.6) BS02 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171131 3o78:B (2.6) BS03 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171132 3o78:B (2.6) BS04 CA 2.7.11.18 GO:0000922 ... P0DP24 22163646
    171133 3o7a:A (1.67) BS01 peptide ? N/A Q86YI8 27223324
    171134 3o7a:A (1.67) BS02 ZN ? N/A Q86YI8 27223324
    171135 3o7a:A (1.67) BS03 ZN ? N/A Q86YI8 27223324
    171136 3o7b:A (1.45) BS01 TYR 2.1.1.- GO:0006364 ... O29524 21087996
    171137 3o7b:A (1.45) BS02 SAH 2.1.1.- GO:0006364 ... O29524 21087996
    171138 3o7j:A (2.0) BS01 2AL 4.1.1.97 GO:0019628 ... A6T925 20826786
    171139 3o7l:B (2.8) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 20890288
    171140 3o7l:B (2.8) BS02 ANP 2.7.11.11 GO:0000287 ... P05132 20890288
    171141 3o7l:D (2.8) BS01 peptide 2.7.11.11 GO:0000287 ... P05132 20890288
    171142 3o7n:A (1.72) BS01 HEM ? GO:0019825 ... Q9NAV8 N/A
    171143 3o7n:A (1.72) BS02 BML ? GO:0019825 ... Q9NAV8 N/A
    171144 3o7n:B (1.72) BS01 HEM ? GO:0019825 ... Q9NAV8 N/A
    171145 3o7n:B (1.72) BS02 BML ? GO:0019825 ... Q9NAV8 N/A
    171146 3o7s:A (1.73) BS01 MML ? GO:0005506 ... P02791 21113534
    171147 3o7u:A (1.708) BS01 PXN 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 21545144
    171148 3o7u:A (1.708) BS02 ZN 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 21545144
    171149 3o7u:A (1.708) BS03 ZN 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 21545144
    171150 3o7u:A (1.708) BS04 O7U 3.5.4.-
    3.5.4.1
    GO:0004131 ... P25524 21545144 MOAD: Ki=52nM
    171151 3o7v:X (2.1) BS01 rna 3.1.26.- GO:0003723 ... Q96J94 21193640
    171152 3o7w:A (2.0) BS01 SAM 2.1.1.233 GO:0008168 ... Q9UIC8 21206058
    171153 3o80:A (2.18) BS01 ANP 2.7.1.1 GO:0001678 ... P33284 20943665
    171154 3o80:A (2.18) BS02 ANP 2.7.1.1 GO:0001678 ... P33284 20943665
    171155 3o82:A (2.7) BS01 HP8 N/A GO:0008668 ... N/A 20853905
    171156 3o82:A (2.7) BS02 CA N/A GO:0008668 ... N/A 20853905
    171157 3o82:A (2.7) BS03 CA N/A GO:0008668 ... N/A 20853905
    171158 3o82:B (2.7) BS01 HP8 N/A GO:0008668 ... N/A 20853905
    171159 3o82:B (2.7) BS02 CA N/A GO:0008668 ... N/A 20853905
    171160 3o83:A (1.9) BS01 IXN N/A GO:0008668 ... N/A 20853905
    171161 3o83:A (1.9) BS02 CA N/A GO:0008668 ... N/A 20853905
    171162 3o83:A (1.9) BS03 CA N/A GO:0008668 ... N/A 20853905
    171163 3o83:A (1.9) BS04 CA N/A GO:0008668 ... N/A 20853905
    171164 3o83:B (1.9) BS01 IXN N/A GO:0008668 ... N/A 20853905
    171165 3o83:B (1.9) BS02 CA N/A GO:0008668 ... N/A 20853905
    171166 3o83:B (1.9) BS03 CA N/A GO:0008668 ... N/A 20853905
    171167 3o84:A (2.1) BS01 HTJ N/A GO:0008668 ... N/A 20853905 MOAD: Kd=58nM
    171168 3o84:A (2.1) BS02 CA N/A GO:0008668 ... N/A 20853905
    171169 3o84:A (2.1) BS03 CA N/A GO:0008668 ... N/A 20853905
    171170 3o84:A (2.1) BS04 CA N/A GO:0008668 ... N/A 20853905
    171171 3o84:B (2.1) BS01 HTJ N/A GO:0008668 ... N/A 20853905 MOAD: Kd=58nM
    171172 3o84:B (2.1) BS02 CA N/A GO:0008668 ... N/A 20853905
    171173 3o86:A (1.6) BS01 BSF 3.5.2.6 GO:0008800 ... P00811 20945905
    171174 3o86:B (1.6) BS01 BSF 3.5.2.6 GO:0008800 ... P00811 20945905
    171175 3o87:A (1.78) BS01 BSG 3.5.2.6 GO:0008800 ... P00811 20945905
    171176 3o87:B (1.78) BS01 BSG 3.5.2.6 GO:0008800 ... P00811 20945905
    171177 3o88:A (1.64) BS01 BSH 3.5.2.6 GO:0008800 ... P00811 20945905
    171178 3o88:B (1.64) BS01 BSH 3.5.2.6 GO:0008800 ... P00811 20945905
    171179 3o89:A (1.1) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    171180 3o8a:A (2.3) BS01 O8A 1.3.5.2 GO:0004152 ... Q08210 20702404 MOAD: ic50=0.022uM
    171181 3o8a:A (2.3) BS02 FMN 1.3.5.2 GO:0004152 ... Q08210 20702404
    171182 3o8b:A (1.95) BS01 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171183 3o8b:B (1.95) BS01 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171184 3o8c:A (2.0) BS01 rna 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171185 3o8c:A (2.0) BS02 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171186 3o8c:B (2.0) BS01 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171187 3o8d:A (2.05) BS01 MG 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171188 3o8d:A (2.05) BS02 ADP 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171189 3o8d:A (2.05) BS03 BEF 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171190 3o8d:B (2.05) BS01 MG 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171191 3o8d:B (2.05) BS02 ADP 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171192 3o8d:B (2.05) BS03 BEF 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0004386 ... Q99AU2 21145896
    171193 3o8g:A (1.9) BS01 O8G ? GO:0000976 ... P9WMC1 20704273 MOAD: ic50=7.4uM
    171194 3o8h:A (1.9) BS01 O8H ? GO:0000976 ... P9WMC1 20704273 MOAD: ic50=580nM
    BindingDB: IC50=580nM
    171195 3o8i:A (2.0) BS01 peptide ? GO:0001836 ... P31947 20679480
    171196 3o8i:A (2.0) BS02 M1T ? GO:0001836 ... P31947 20679480
    171197 3o8l:A (3.2) BS01 ATP 2.7.1.11 GO:0003872 ... P00511 21241708
    171198 3o8l:A (3.2) BS02 ADP 2.7.1.11 GO:0003872 ... P00511 21241708
    171199 3o8l:A (3.2) BS03 ATP 2.7.1.11 GO:0003872 ... P00511 21241708
    171200 3o8l:A (3.2) BS04 PO4 2.7.1.11 GO:0003872 ... P00511 21241708

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).