SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    171801 3oeh:F (3.0) BS02 MG 7.1.2.2 GO:0005515 ... P00830 20843806
    171802 3oeh:J (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171803 3oeh:K (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171804 3oeh:K (3.0) BS02 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171805 3oeh:L (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171806 3oeh:M (3.0) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171807 3oeh:O (3.0) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171808 3oeh:S (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171809 3oeh:T (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171810 3oeh:T (3.0) BS02 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171811 3oeh:U (3.0) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171812 3oeh:V (3.0) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171813 3oeh:V (3.0) BS02 MG 7.1.2.2 GO:0005515 ... P00830 20843806
    171814 3oeh:X (3.0) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171815 3oeh:X (3.0) BS02 MG 7.1.2.2 GO:0005515 ... P00830 20843806
    171816 3oeh:Y (3.0) BS01 peptide 3.6.3.14 GO:0015986 ... P38077 20843806
    171817 3oek:A (1.9) BS01 ASP ? GO:0015276 ... Q62645 21522138
    171818 3oel:A (1.9) BS01 DGL ? GO:0015276 ... Q62645 21522138
    171819 3oem:A (1.9) BS01 OEM ? GO:0015276 ... Q62645 21522138
    171820 3oen:A (1.8) BS01 GLU ? GO:0015276 ... Q62645 21522138
    171821 3oes:A (2.301) BS01 MG ? GO:0003924 ... Q8TAI7 N/A
    171822 3oes:A (2.301) BS02 GNP ? GO:0003924 ... Q8TAI7 N/A
    171823 3oet:A (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171824 3oet:B (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171825 3oet:C (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171826 3oet:D (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171827 3oet:E (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171828 3oet:F (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171829 3oet:G (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171830 3oet:H (2.36) BS01 NAD 1.1.1.290 GO:0005737 ... P60802 N/A
    171831 3oeu:F (2.6) BS01 MG 3.4.25.1 GO:0005839 ... P21242 20875739
    171832 3oeu:G (2.6) BS01 MG 3.4.25.1 GO:0003674 ... P21243 20875739
    171833 3oeu:H (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P25043 20875739
    171834 3oeu:I (2.6) BS01 MG 3.4.25.1 GO:0005515 ... P25451 20875739
    171835 3oeu:K (2.6) BS01 MG 3.4.25.1 GO:0004298 ... P30656 20875739
    171836 3oeu:K (2.6) BS02 OEU 3.4.25.1 GO:0004298 ... P30656 20875739
    171837 3oeu:L (2.6) BS01 OEU 3.4.25.1 GO:0003674 ... P23724 20875739
    171838 3oeu:L (2.6) BS02 MG 3.4.25.1 GO:0003674 ... P23724 20875739
    171839 3oeu:L (2.6) BS03 MG 3.4.25.1 GO:0003674 ... P23724 20875739
    171840 3oeu:N (2.6) BS01 MG 3.4.25.1 GO:0004175 ... P38624 20875739
    171841 3oeu:Y (2.6) BS01 OEU 3.4.25.1 GO:0004298 ... P30656 20875739
    171842 3oeu:Z (2.6) BS01 OEU 3.4.25.1 GO:0003674 ... P23724 20875739
    171843 3oev:F (2.85) BS01 MG 3.4.25.1 GO:0005839 ... P21242 20875739
    171844 3oev:F (2.85) BS02 MG 3.4.25.1 GO:0005839 ... P21242 20875739
    171845 3oev:G (2.85) BS01 MG 3.4.25.1 GO:0003674 ... P21243 20875739
    171846 3oev:H (2.85) BS01 MG 3.4.25.1 GO:0004298 ... P25043 20875739
    171847 3oev:I (2.85) BS01 MG 3.4.25.1 GO:0005515 ... P25451 20875739
    171848 3oev:I (2.85) BS02 MG 3.4.25.1 GO:0005515 ... P25451 20875739
    171849 3oev:K (2.85) BS01 MG 3.4.25.1 GO:0004298 ... P30656 20875739
    171850 3oev:K (2.85) BS02 3OE 3.4.25.1 GO:0004298 ... P30656 20875739
    171851 3oev:L (2.85) BS01 3OE 3.4.25.1 GO:0003674 ... P23724 20875739
    171852 3oev:L (2.85) BS02 MG 3.4.25.1 GO:0003674 ... P23724 20875739
    171853 3oev:L (2.85) BS03 MG 3.4.25.1 GO:0003674 ... P23724 20875739
    171854 3oev:N (2.85) BS01 MG 3.4.25.1 GO:0004175 ... P38624 20875739
    171855 3oev:Y (2.85) BS01 3OE 3.4.25.1 GO:0004298 ... P30656 20875739
    171856 3oev:Z (2.85) BS01 3OE 3.4.25.1 GO:0003674 ... P23724 20875739
    171857 3oew:A (2.2) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 21143326 MOAD: Kd=1.5uM
    171858 3oey:A (2.0) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 21143326 MOAD: Kd=3.5uM
    171859 3oez:A (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00523 N/A BindingDB: IC50=2784nM
    171860 3oez:B (2.4) BS01 STI 2.7.10.2 GO:0004672 ... P00523 N/A BindingDB: IC50=2784nM
    171861 3of1:A (2.21) BS01 CMP ? GO:0005952 ... P07278 21070946
    171862 3of1:A (2.21) BS02 CMP ? GO:0005952 ... P07278 21070946
    171863 3of2:A (2.0) BS01 NAD 1.3.1.9 GO:0004318 ... P9WGR1 21143326 MOAD: Kd=4.7uM
    171864 3of3:A (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171865 3of3:B (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171866 3of3:B (1.83) BS02 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171867 3of3:C (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171868 3of3:D (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171869 3of3:E (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171870 3of3:F (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171871 3of3:G (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171872 3of3:H (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171873 3of3:I (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171874 3of3:J (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171875 3of3:K (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171876 3of3:L (1.83) BS01 DIH 2.4.2.1 GO:0003824 ... Q9KPM0 N/A
    171877 3of4:A (1.9) BS01 FMN ? GO:0016491 ... Q5R179 N/A
    171878 3of4:A (1.9) BS02 FMN ? GO:0016491 ... Q5R179 N/A
    171879 3of4:B (1.9) BS01 FMN ? GO:0016491 ... Q5R179 N/A
    171880 3of4:B (1.9) BS02 FMN ? GO:0016491 ... Q5R179 N/A
    171881 3of4:C (1.9) BS01 FAD ? GO:0016491 ... Q5R179 N/A
    171882 3of8:A (2.2) BS01 I0Y 3.4.22.15 GO:0006508 ... P07711 20850545
    171883 3of9:A (1.761) BS01 I0X 3.4.22.15 GO:0006508 ... P07711 20850545
    171884 3ofi:A (2.35) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 21185309
    171885 3ofi:A (2.35) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 21185309
    171886 3ofi:B (2.35) BS01 peptide 3.4.24.56 GO:0001540 ... P14735 21185309
    171887 3ofi:B (2.35) BS02 ZN 3.4.24.56 GO:0001540 ... P14735 21185309
    171888 3ofk:A (1.85) BS01 SAH 2.1.1.- GO:0008168 ... Q9AQ22 20970431
    171889 3ofk:B (1.85) BS01 SAH 2.1.1.- GO:0008168 ... Q9AQ22 20970431
    171890 3ofk:C (1.85) BS01 SAH 2.1.1.- GO:0008168 ... Q9AQ22 20970431
    171891 3ofk:D (1.85) BS01 SAH 2.1.1.- GO:0008168 ... Q9AQ22 20970431
    171892 3ofm:A (2.0) BS01 4B0 2.7.11.1 GO:0000785 ... P19784 21241709
    171893 3ofn:A (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171894 3ofn:B (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171895 3ofn:B (3.2) BS02 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171896 3ofn:C (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171897 3ofn:D (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171898 3ofn:F (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171899 3ofn:J (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171900 3ofn:K (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171901 3ofn:L (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171902 3ofn:M (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171903 3ofn:O (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171904 3ofn:S (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171905 3ofn:T (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171906 3ofn:T (3.2) BS02 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171907 3ofn:U (3.2) BS01 ANP 3.6.3.14 GO:0005524 ... P07251 20843806
    171908 3ofn:V (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171909 3ofn:X (3.2) BS01 ANP 7.1.2.2 GO:0005515 ... P00830 20843806
    171910 3ofn:X (3.2) BS02 MG 7.1.2.2 GO:0005515 ... P00830 20843806
    171911 3ofs:A (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171912 3ofs:B (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171913 3ofs:C (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171914 3ofs:D (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171915 3ofs:E (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171916 3ofs:F (2.2) BS01 AVU 2.4.99.20
    3.2.2.-
    3.2.2.6
    GO:0061809 ... P28907 21134381
    171917 3oft:A (1.9) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171918 3oft:A (1.9) BS02 HX2 ? GO:0004497 ... Q2G637 21154803
    171919 3oft:B (1.9) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171920 3oft:B (1.9) BS02 HX2 ? GO:0004497 ... Q2G637 21154803
    171921 3oft:C (1.9) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171922 3ofu:A (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171923 3ofu:A (2.8) BS02 ID3 ? GO:0004497 ... Q2G637 21154803
    171924 3ofu:B (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171925 3ofu:C (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171926 3ofu:D (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171927 3ofu:E (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171928 3ofu:F (2.8) BS01 HEM ? GO:0004497 ... Q2G637 21154803
    171929 3og2:A (1.2) BS01 MAN 3.2.1.23 GO:0004553 ... Q70SY0 21130883
    171930 3og2:A (1.2) BS02 MAN 3.2.1.23 GO:0004553 ... Q70SY0 21130883
    171931 3og2:A (1.2) BS03 MAN 3.2.1.23 GO:0004553 ... Q70SY0 21130883
    171932 3og2:A (1.2) BS04 BMA 3.2.1.23 GO:0004553 ... Q70SY0 21130883
    171933 3og2:A (1.2) BS05 MAN 3.2.1.23 GO:0004553 ... Q70SY0 21130883
    171934 3og7:A (2.45) BS01 032 2.7.11.1 GO:0004672 ... P15056 20823850 BindingDB: IC50=31nM, Kd=51nM, EC50=2290nM
    171935 3og8:A (2.4) BS01 rna 3.6.4.13 N/A O95786 20961956
    171936 3og8:A (2.4) BS02 rna 3.6.4.13 N/A O95786 20961956
    171937 3og8:A (2.4) BS03 ZN 3.6.4.13 N/A O95786 20961956
    171938 3og8:B (2.4) BS01 rna 3.6.4.13 N/A O95786 20961956
    171939 3og8:B (2.4) BS02 rna 3.6.4.13 N/A O95786 20961956
    171940 3og8:B (2.4) BS03 ZN 3.6.4.13 N/A O95786 20961956
    171941 3ogb:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 21193395
    171942 3ogd:A (2.8) BS01 dna 3.2.2.21 GO:0003824 ... P04395 20843803
    171943 3ogh:A (1.65) BS01 MG ? N/A A0A0H2V857 N/A
    171944 3ogh:A (1.65) BS02 FE ? N/A A0A0H2V857 N/A
    171945 3ogh:B (1.65) BS01 MG ? N/A A0A0H2V857 N/A
    171946 3ogh:B (1.65) BS02 FE ? N/A A0A0H2V857 N/A
    171947 3ogj:A (2.751) BS01 CMP 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=27+-3.6nM (21526164)
    171948 3ogj:B (2.751) BS01 CMP 2.7.11.12 N/A Q13976 21526164 Manual survey: Kd=27+-3.6nM (21526164)
    171949 3ogj:C (2.751) BS01 PO4 2.7.11.12 N/A Q13976 21526164
    171950 3ogj:D (2.751) BS01 PO4 2.7.11.12 N/A Q13976 21526164
    171951 3ogk:B (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171952 3ogk:B (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171953 3ogk:D (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171954 3ogk:D (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171955 3ogk:F (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171956 3ogk:F (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171957 3ogk:H (2.8) BS01 OGK ? GO:0005515 ... O04197 20927106
    171958 3ogk:J (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171959 3ogk:J (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171960 3ogk:L (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171961 3ogk:L (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171962 3ogk:N (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171963 3ogk:N (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171964 3ogk:P (2.8) BS01 peptide ? GO:0005515 ... O04197 20927106
    171965 3ogk:P (2.8) BS02 OGK ? GO:0005515 ... O04197 20927106
    171966 3ogl:B (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171967 3ogl:B (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171968 3ogl:D (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171969 3ogl:D (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171970 3ogl:F (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171971 3ogl:F (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171972 3ogl:H (3.18) BS01 7JA ? GO:0005515 ... O04197 20927106
    171973 3ogl:J (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171974 3ogl:J (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171975 3ogl:L (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171976 3ogl:L (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171977 3ogl:N (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171978 3ogl:N (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171979 3ogl:P (3.18) BS01 peptide ? GO:0005515 ... O04197 20927106
    171980 3ogl:P (3.18) BS02 7JA ? GO:0005515 ... O04197 20927106
    171981 3ogm:B (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171982 3ogm:B (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171983 3ogm:D (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171984 3ogm:D (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171985 3ogm:F (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171986 3ogm:F (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171987 3ogm:H (3.34) BS01 OGK ? GO:0005515 ... O04197 20927106
    171988 3ogm:J (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171989 3ogm:J (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171990 3ogm:L (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171991 3ogm:L (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171992 3ogm:N (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171993 3ogm:N (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171994 3ogm:P (3.34) BS01 peptide ? GO:0005515 ... O04197 20927106
    171995 3ogm:P (3.34) BS02 OGK ? GO:0005515 ... O04197 20927106
    171996 3ogn:A (1.3) BS01 3OG ? GO:0005549 ... Q8T6I2 20956299
    171997 3ogn:B (1.3) BS01 3OG ? GO:0005549 ... Q8T6I2 20956299
    171998 3ogp:A (1.7) BS01 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23
    GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    171999 3ogp:A (1.7) BS02 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23
    GO:0004190 ... P16088 21636894 MOAD: ic50=36nM
    172000 3ogp:B (1.7) BS01 017 2.7.7.-
    2.7.7.49
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.-
    3.6.1.23
    GO:0004190 ... P16088 21636894 MOAD: ic50=36nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).