SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    172801 3ope:A (2.9) BS03 ZN 2.1.1.359
    2.1.1.367
    GO:0005634 ... Q9NR48 21239497
    172802 3ope:A (2.9) BS04 SAM 2.1.1.359
    2.1.1.367
    GO:0005634 ... Q9NR48 21239497
    172803 3ope:B (2.9) BS01 ZN 2.1.1.359
    2.1.1.367
    GO:0005634 ... Q9NR48 21239497
    172804 3ope:B (2.9) BS02 ZN 2.1.1.359
    2.1.1.367
    GO:0005634 ... Q9NR48 21239497
    172805 3ope:B (2.9) BS03 SAM 2.1.1.359
    2.1.1.367
    GO:0005634 ... Q9NR48 21239497
    172806 3oph:A (1.34) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172807 3oph:A (1.34) BS02 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172808 3opk:C (1.9) BS01 MG ? GO:0005507 ... Q7CPA2 N/A
    172809 3opl:A (1.8) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172810 3opm:A (2.72) BS01 LUI 3.4.14.5 GO:0001618 ... P27487 21764322 BindingDB: IC50=240nM
    172811 3opm:B (2.72) BS01 LUI 3.4.14.5 GO:0001618 ... P27487 21764322 BindingDB: IC50=240nM
    172812 3opm:C (2.72) BS01 LUI 3.4.14.5 GO:0001618 ... P27487 21764322 BindingDB: IC50=240nM
    172813 3opm:D (2.72) BS01 LUI 3.4.14.5 GO:0001618 ... P27487 21764322 BindingDB: IC50=240nM
    172814 3opo:A (3.848) BS01 AG ? GO:0016020 ... P77239 19695261
    172815 3opo:B (3.848) BS01 AG ? GO:0016020 ... P77239 19695261
    172816 3opp:A (1.8) BS01 SA2 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172817 3opp:A (1.8) BS02 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172818 3opr:A (1.65) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172819 3opr:A (1.65) BS02 MA4 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172820 3opr:A (1.65) BS03 SA2 3.5.2.6 GO:0008800 ... P0AD64 21357298
    172821 3ops:A (2.2) BS01 MG ? N/A A0ACD6B8H0 N/A
    172822 3ops:A (2.2) BS02 MG ? N/A A0ACD6B8H0 N/A
    172823 3ops:B (2.2) BS01 MG ? N/A A0ACD6B8H0 N/A
    172824 3ops:B (2.2) BS02 MG ? N/A A0ACD6B8H0 N/A
    172825 3ops:C (2.2) BS01 MG ? N/A A0ACD6B8H0 N/A
    172826 3ops:C (2.2) BS02 MG ? N/A A0ACD6B8H0 N/A
    172827 3ops:D (2.2) BS01 MG ? N/A A0ACD6B8H0 N/A
    172828 3ops:D (2.2) BS02 MG ? N/A A0ACD6B8H0 N/A
    172829 3opt:A (2.2) BS01 AKG 1.14.11.27 N/A P39956 21067515
    172830 3opu:A (2.181) BS01 CA ? N/A P11657 21206016
    172831 3opu:A (2.181) BS02 CA ? N/A P11657 21206016
    172832 3opu:B (2.181) BS01 CA ? N/A P11657 21206016
    172833 3opu:B (2.181) BS02 CA ? N/A P11657 21206016
    172834 3opu:C (2.181) BS01 CA ? N/A P11657 21206016
    172835 3opu:C (2.181) BS02 CA ? N/A P11657 21206016
    172836 3opu:D (2.181) BS01 CA ? N/A P11657 21206016
    172837 3opu:D (2.181) BS02 CA ? N/A P11657 21206016
    172838 3opu:E (2.181) BS01 CA ? N/A P11657 21206016
    172839 3opu:E (2.181) BS02 CA ? N/A P11657 21206016
    172840 3opu:F (2.181) BS01 CA ? N/A P11657 21206016
    172841 3opu:F (2.181) BS02 CA ? N/A P11657 21206016
    172842 3opv:A (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172843 3opv:B (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172844 3opv:C (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172845 3opv:D (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172846 3opv:E (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172847 3opv:F (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172848 3opv:G (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172849 3opv:H (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172850 3opv:I (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172851 3opv:J (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172852 3opv:K (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172853 3opv:L (2.4) BS01 PO4 2.4.2.1 GO:0003824 ... P0ABP8 21672603
    172854 3opx:A (1.7) BS01 MG ? GO:0005575 ... P53078 N/A
    172855 3opx:A (1.7) BS02 U5P ? GO:0005575 ... P53078 N/A
    172856 3opy:B (3.05) BS01 ATP 2.7.1.11 GO:0003872 ... Q8TGA0 20833871
    172857 3opy:D (3.05) BS01 ATP 2.7.1.11 GO:0003872 ... Q8TGA0 20833871
    172858 3opy:F (3.05) BS01 ATP 2.7.1.11 GO:0003872 ... Q8TGA0 20833871
    172859 3opy:H (3.05) BS01 ATP 2.7.1.11 GO:0003872 ... Q8TGA0 20833871
    172860 3oq1:A (2.6) BS01 NAP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172861 3oq1:A (2.6) BS02 3OQ 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172862 3oq1:B (2.6) BS01 NAP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172863 3oq1:B (2.6) BS02 3OQ 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172864 3oq1:B (2.6) BS03 3OQ 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172865 3oq1:C (2.6) BS01 3OQ 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172866 3oq1:C (2.6) BS02 NAP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172867 3oq1:D (2.6) BS01 3OQ 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172868 3oq1:D (2.6) BS02 NAP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 20971000
    172869 3oq5:A (2.5005) BS01 peptide ? GO:0005634 ... Q9Y468 20870725
    172870 3oq5:C (2.5005) BS01 peptide ? GO:0005634 ... Q9Y468 20870725
    172871 3oq6:A (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 21184752
    172872 3oq6:A (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 21184752
    172873 3oq6:A (1.2) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 21184752
    172874 3oq6:A (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 21184752
    172875 3oq6:B (1.2) BS01 ZN 1.1.1.1 GO:0004022 ... P00327 21184752
    172876 3oq6:B (1.2) BS02 ZN 1.1.1.1 GO:0004022 ... P00327 21184752
    172877 3oq6:B (1.2) BS03 NAJ 1.1.1.1 GO:0004022 ... P00327 21184752
    172878 3oq6:B (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 21184752
    172879 3oqe:A (1.9) BS01 CO 3.1.8.1 GO:0008270 ... Q93LD7 20868365
    172880 3oqe:A (1.9) BS02 CO 3.1.8.1 GO:0008270 ... Q93LD7 20868365
    172881 3oqf:A (2.78) BS01 S51 3.4.23.15 GO:0004190 ... P00797 20850300 BindingDB: IC50=91nM
    172882 3oqf:B (2.78) BS01 S51 3.4.23.15 GO:0004190 ... P00797 20850300 BindingDB: IC50=91nM
    172883 3oqg:A (1.75) BS01 dna ? N/A Q9KJ88 20935048
    172884 3oqg:A (1.75) BS02 dna ? N/A Q9KJ88 20935048
    172885 3oqg:B (1.75) BS01 dna ? N/A Q9KJ88 20935048
    172886 3oqg:B (1.75) BS02 dna ? N/A Q9KJ88 20935048
    172887 3oqj:A (2.399) BS01 3CX 2.3.2.22 GO:0016755 ... Q65EX3 21325056
    172888 3oqj:B (2.399) BS01 3CX 2.3.2.22 GO:0016755 ... Q65EX3 21325056
    172889 3oqk:A (2.9) BS01 S52 3.4.23.15 GO:0004190 ... P00797 20850300 BindingDB: IC50=420nM
    172890 3oqk:B (2.9) BS01 S52 3.4.23.15 GO:0004190 ... P00797 20850300 BindingDB: IC50=420nM
    172891 3oqm:A (2.96) BS01 dna ? GO:0000976 ... P25144 21106498
    172892 3oqm:A (2.96) BS02 dna ? GO:0000976 ... P25144 21106498
    172893 3oqm:C (2.96) BS01 dna ? GO:0000976 ... P25144 21106498
    172894 3oqm:C (2.96) BS02 dna ? GO:0000976 ... P25144 21106498
    172895 3oqn:A (3.3) BS01 dna ? GO:0000976 ... P25144 21106498
    172896 3oqn:A (3.3) BS02 dna ? GO:0000976 ... P25144 21106498
    172897 3oqn:C (3.3) BS01 dna ? GO:0000976 ... P25144 21106498
    172898 3oqn:C (3.3) BS02 dna ? GO:0000976 ... P25144 21106498
    172899 3oqo:A (2.97) BS01 dna ? GO:0000976 ... P25144 21106498
    172900 3oqo:A (2.97) BS02 dna ? GO:0000976 ... P25144 21106498
    172901 3oqo:C (2.97) BS01 dna ? GO:0000976 ... P25144 21106498
    172902 3oqo:C (2.97) BS02 dna ? GO:0000976 ... P25144 21106498
    172903 3oqq:A (2.08) BS01 CA N/A N/A N/A N/A
    172904 3oqq:A (2.08) BS02 CA N/A N/A N/A N/A
    172905 3oqq:A (2.08) BS03 CA N/A N/A N/A N/A
    172906 3oqr:A (2.4) BS01 CU ? GO:0005507 ... P00282 20879734
    172907 3oqs:A (2.0) BS01 peptide ? GO:0005737 ... P52293 21388519
    172908 3oqu:A (2.68) BS01 A8S ? GO:0004864 ... Q84MC7 23844015
    172909 3oqu:B (2.68) BS01 A8S ? GO:0004864 ... Q84MC7 23844015
    172910 3oqy:A (1.494) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172911 3oqy:B (1.494) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172912 3oqy:B (1.494) BS02 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172913 3oqz:A (2.5) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172914 3oqz:B (2.5) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172915 3or0:A (2.3) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172916 3or0:B (2.3) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 20883003
    172917 3or1:A (1.76) BS01 SO3 ? GO:0000103 ... E2QR97 N/A
    172918 3or1:A (1.76) BS02 SRM ? GO:0000103 ... E2QR97 N/A
    172919 3or1:A (1.76) BS03 SF4 ? GO:0000103 ... E2QR97 N/A
    172920 3or1:A (1.76) BS04 SF4 ? GO:0000103 ... E2QR97 N/A
    172921 3or1:A (1.76) BS05 SRM ? GO:0000103 ... E2QR97 N/A
    172922 3or1:B (1.76) BS01 SRM ? GO:0000103 ... E2QR96 N/A
    172923 3or1:B (1.76) BS02 SRM ? GO:0000103 ... E2QR96 N/A
    172924 3or1:B (1.76) BS03 SF4 ? GO:0000103 ... E2QR96 N/A
    172925 3or1:B (1.76) BS04 SF4 ? GO:0000103 ... E2QR96 N/A
    172926 3or1:D (1.76) BS01 SO3 ? GO:0000103 ... E2QR97 N/A
    172927 3or1:D (1.76) BS02 SRM ? GO:0000103 ... E2QR97 N/A
    172928 3or1:D (1.76) BS03 SF4 ? GO:0000103 ... E2QR97 N/A
    172929 3or1:D (1.76) BS04 SF4 ? GO:0000103 ... E2QR97 N/A
    172930 3or1:D (1.76) BS05 SRM ? GO:0000103 ... E2QR97 N/A
    172931 3or1:E (1.76) BS01 SRM ? GO:0000103 ... E2QR96 N/A
    172932 3or1:E (1.76) BS02 SRM ? GO:0000103 ... E2QR96 N/A
    172933 3or1:E (1.76) BS03 SF4 ? GO:0000103 ... E2QR96 N/A
    172934 3or1:E (1.76) BS04 SF4 ? GO:0000103 ... E2QR96 N/A
    172935 3or2:A (2.05) BS01 SF4 ? GO:0000103 ... E2QR97 N/A
    172936 3or2:A (2.05) BS02 SF4 ? GO:0000103 ... E2QR97 N/A
    172937 3or2:A (2.05) BS03 SO3 ? GO:0000103 ... E2QR97 N/A
    172938 3or2:A (2.05) BS04 SRM ? GO:0000103 ... E2QR97 N/A
    172939 3or2:A (2.05) BS05 SO3 ? GO:0000103 ... E2QR97 N/A
    172940 3or2:A (2.05) BS06 SRM ? GO:0000103 ... E2QR97 N/A
    172941 3or2:B (2.05) BS01 SRM ? GO:0000103 ... E2QR96 N/A
    172942 3or2:B (2.05) BS02 SRM ? GO:0000103 ... E2QR96 N/A
    172943 3or2:B (2.05) BS03 SF4 ? GO:0000103 ... E2QR96 N/A
    172944 3or2:B (2.05) BS04 SF4 ? GO:0000103 ... E2QR96 N/A
    172945 3or2:C (2.05) BS01 SRM ? GO:0002143 ... E2QR99 N/A
    172946 3or2:D (2.05) BS01 SF4 ? GO:0000103 ... E2QR97 N/A
    172947 3or2:D (2.05) BS02 SF4 ? GO:0000103 ... E2QR97 N/A
    172948 3or2:D (2.05) BS03 SO3 ? GO:0000103 ... E2QR97 N/A
    172949 3or2:D (2.05) BS04 SRM ? GO:0000103 ... E2QR97 N/A
    172950 3or2:D (2.05) BS05 SO3 ? GO:0000103 ... E2QR97 N/A
    172951 3or2:D (2.05) BS06 SRM ? GO:0000103 ... E2QR97 N/A
    172952 3or2:E (2.05) BS01 SRM ? GO:0000103 ... E2QR96 N/A
    172953 3or2:E (2.05) BS02 SRM ? GO:0000103 ... E2QR96 N/A
    172954 3or2:E (2.05) BS03 SF4 ? GO:0000103 ... E2QR96 N/A
    172955 3or2:E (2.05) BS04 SF4 ? GO:0000103 ... E2QR96 N/A
    172956 3or3:A (1.95) BS01 dna ? N/A Q9KJ88 20935048
    172957 3or3:A (1.95) BS02 dna ? N/A Q9KJ88 20935048
    172958 3or3:A (1.95) BS03 dna ? N/A Q9KJ88 20935048
    172959 3or3:A (1.95) BS04 CA ? N/A Q9KJ88 20935048
    172960 3or3:B (1.95) BS01 dna ? N/A Q9KJ88 20935048
    172961 3or3:B (1.95) BS02 dna ? N/A Q9KJ88 20935048
    172962 3or3:B (1.95) BS03 dna ? N/A Q9KJ88 20935048
    172963 3or3:B (1.95) BS04 CA ? N/A Q9KJ88 20935048
    172964 3orc:A (3.0) BS01 dna ? GO:0003677 ... P03040 9684880
    172965 3orc:A (3.0) BS02 dna ? GO:0003677 ... P03040 9684880
    172966 3ord:A (2.22) BS01 HEM ? GO:0019825 ... Q9NAV8 23325557
    172967 3ord:B (2.22) BS01 HEM ? GO:0019825 ... Q9NAV8 23325557
    172968 3orf:A (2.16) BS01 NAD 1.5.1.34 GO:0004155 ... Q86A17 21819985
    172969 3orf:B (2.16) BS01 NAD 1.5.1.34 GO:0004155 ... Q86A17 21819985
    172970 3orf:C (2.16) BS01 NAD 1.5.1.34 GO:0004155 ... Q86A17 21819985
    172971 3orf:D (2.16) BS01 NAD 1.5.1.34 GO:0004155 ... Q86A17 21819985
    172972 3org:A (3.5) BS01 CL N/A GO:0006821 ... N/A 20929736
    172973 3org:A (3.5) BS02 CL N/A GO:0006821 ... N/A 20929736
    172974 3org:B (3.5) BS01 CL N/A GO:0006821 ... N/A 20929736
    172975 3org:B (3.5) BS02 CL N/A GO:0006821 ... N/A 20929736
    172976 3org:C (3.5) BS01 CL N/A GO:0006821 ... N/A 20929736
    172977 3org:D (3.5) BS01 CL N/A GO:0006821 ... N/A 20929736
    172978 3org:D (3.5) BS02 CL N/A GO:0006821 ... N/A 20929736
    172979 3orh:A (1.86) BS01 SAH 2.1.1.2 GO:0005515 ... Q14353 N/A
    172980 3orh:B (1.86) BS01 SAH 2.1.1.2 GO:0005515 ... Q14353 N/A
    172981 3orh:C (1.86) BS01 SAH 2.1.1.2 GO:0005515 ... Q14353 N/A
    172982 3orh:D (1.86) BS01 SAH 2.1.1.2 GO:0005515 ... Q14353 N/A
    172983 3ori:A (2.0) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172984 3ori:A (2.0) BS02 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172985 3ori:B (2.0) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172986 3ori:B (2.0) BS02 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172987 3ori:C (2.0) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172988 3ori:C (2.0) BS02 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172989 3ori:C (2.0) BS03 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172990 3ori:D (2.0) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172991 3ori:D (2.0) BS02 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172992 3ori:D (2.0) BS03 MN 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172993 3orj:A (2.16) BS01 ZN N/A GO:0030247 ... N/A N/A
    172994 3ork:A (1.6) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 N/A
    172995 3ork:A (1.6) BS02 MN 2.7.11.1 GO:0004672 ... P9WI81 N/A
    172996 3orl:A (2.9) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 N/A
    172997 3orm:A (2.5) BS01 AGS 2.7.11.1 GO:0004672 ... P9WI81 21134645
    172998 3orn:A (2.8) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 21316218
    172999 3orn:A (2.8) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 21316218
    173000 3orn:A (2.8) BS03 3OR 2.7.12.2 GO:0004672 ... Q02750 21316218 BindingDB: IC50=8.8nM, Kd=0.24nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).