SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    174201 3p4u:D (1.9) BS01 peptide 3.4.22.59 GO:0004197 ... P55212 N/A
    174202 3p4v:A (2.0) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 21332115
    174203 3p4v:A (2.0) BS02 PMX 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 21332115 MOAD: Ki=8uM
    BindingDB: Ki=8000nM
    174204 3p4w:A (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852
    174205 3p4w:B (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852
    174206 3p4w:C (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852
    174207 3p4w:D (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852
    174208 3p4w:E (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852
    174209 3p4x:A (2.41) BS01 ADP 5.6.2.- GO:0003676 ... O51934 21627332
    174210 3p50:A (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852
    174211 3p50:B (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852
    174212 3p50:C (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852
    174213 3p50:D (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852
    174214 3p50:E (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852
    174215 3p53:A (2.0) BS01 GOL ? GO:0001725 ... Q16658 21685497
    174216 3p53:A (2.0) BS02 GOL ? GO:0001725 ... Q16658 21685497
    174217 3p53:A (2.0) BS03 GOL ? GO:0001725 ... Q16658 21685497
    174218 3p53:B (2.0) BS01 GOL ? GO:0001725 ... Q16658 21685497
    174219 3p53:B (2.0) BS02 GOL ? GO:0001725 ... Q16658 21685497
    174220 3p53:B (2.0) BS03 GOL ? GO:0001725 ... Q16658 21685497
    174221 3p55:A (2.0) BS01 670 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22258283
    174222 3p55:A (2.0) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22258283
    174223 3p57:A (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174224 3p57:A (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174225 3p57:B (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174226 3p57:B (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174227 3p57:C (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174228 3p57:C (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174229 3p57:D (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174230 3p57:D (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174231 3p57:I (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174232 3p57:I (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174233 3p57:J (2.1921) BS01 dna ? GO:0000977 ... Q02078 21278418
    174234 3p57:J (2.1921) BS02 dna ? GO:0000977 ... Q02078 21278418
    174235 3p57:P (2.1921) BS01 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 21278418
    174236 3p57:P (2.1921) BS02 ZN 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 21278418
    174237 3p58:A (1.49) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22218610
    174238 3p58:A (1.49) BS02 P58 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22218610 MOAD: Ki=25.4nM
    174239 3p5a:A (1.49) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22276570
    174240 3p5a:A (1.49) BS02 IT2 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22276570 MOAD: Ki=0.95nM
    174241 3p5b:A (3.3) BS01 CA 3.4.21.- GO:0004252 ... Q8NBP7 22081141
    174242 3p5b:L (3.3) BS01 CA ? GO:0005509 ... P01130 22081141
    174243 3p5b:L (3.3) BS02 CA ? GO:0005509 ... P01130 22081141
    174244 3p5c:A (4.2) BS01 CA 3.4.21.- GO:0004252 ... Q8NBP7 22081141
    174245 3p5c:L (4.2) BS01 CA ? GO:0005509 ... P01130 22081141
    174246 3p5c:L (4.2) BS02 CA ? GO:0005509 ... P01130 22081141
    174247 3p5c:L (4.2) BS03 CA ? GO:0005509 ... P01130 22081141
    174248 3p5d:A (1.8013) BS01 MAN ? N/A Q9UJ71 21112338
    174249 3p5d:A (1.8013) BS02 CA ? N/A Q9UJ71 21112338
    174250 3p5d:B (1.8013) BS01 MAN ? N/A Q9UJ71 21112338
    174251 3p5d:B (1.8013) BS02 CA ? N/A Q9UJ71 21112338
    174252 3p5d:C (1.8013) BS01 MAN ? N/A Q9UJ71 21112338
    174253 3p5d:C (1.8013) BS02 CA ? N/A Q9UJ71 21112338
    174254 3p5d:D (1.8013) BS01 MAN ? N/A Q9UJ71 21112338
    174255 3p5d:D (1.8013) BS02 CA ? N/A Q9UJ71 21112338
    174256 3p5e:A (1.7012) BS01 MAN ? N/A Q9UJ71 21112338
    174257 3p5e:A (1.7012) BS02 CA ? N/A Q9UJ71 21112338
    174258 3p5e:B (1.7012) BS01 MAN ? N/A Q9UJ71 21112338
    174259 3p5e:B (1.7012) BS02 CA ? N/A Q9UJ71 21112338
    174260 3p5e:C (1.7012) BS01 MAN ? N/A Q9UJ71 21112338
    174261 3p5e:C (1.7012) BS02 CA ? N/A Q9UJ71 21112338
    174262 3p5e:D (1.7012) BS01 MAN ? N/A Q9UJ71 21112338
    174263 3p5e:D (1.7012) BS02 CA ? N/A Q9UJ71 21112338
    174264 3p5f:A (1.7501) BS01 MAN ? N/A Q9UJ71 21112338
    174265 3p5f:A (1.7501) BS02 CA ? N/A Q9UJ71 21112338
    174266 3p5f:B (1.7501) BS01 MAN ? N/A Q9UJ71 21112338
    174267 3p5f:B (1.7501) BS02 CA ? N/A Q9UJ71 21112338
    174268 3p5f:C (1.7501) BS01 MAN ? N/A Q9UJ71 21112338
    174269 3p5f:C (1.7501) BS02 MAN ? N/A Q9UJ71 21112338
    174270 3p5f:C (1.7501) BS03 CA ? N/A Q9UJ71 21112338
    174271 3p5f:D (1.7501) BS01 MAN ? N/A Q9UJ71 21112338
    174272 3p5f:D (1.7501) BS02 CA ? N/A Q9UJ71 21112338
    174273 3p5g:A (1.6027) BS01 FUC ? N/A Q9UJ71 21112338
    174274 3p5g:A (1.6027) BS02 GLA ? N/A Q9UJ71 21112338
    174275 3p5g:A (1.6027) BS03 CA ? N/A Q9UJ71 21112338
    174276 3p5g:B (1.6027) BS01 FUC ? N/A Q9UJ71 21112338
    174277 3p5g:B (1.6027) BS02 GLA ? N/A Q9UJ71 21112338
    174278 3p5g:B (1.6027) BS03 CA ? N/A Q9UJ71 21112338
    174279 3p5g:C (1.6027) BS01 FUC ? N/A Q9UJ71 21112338
    174280 3p5g:C (1.6027) BS02 CA ? N/A Q9UJ71 21112338
    174281 3p5g:D (1.6027) BS01 FUC ? N/A Q9UJ71 21112338
    174282 3p5g:D (1.6027) BS02 CA ? N/A Q9UJ71 21112338
    174283 3p5h:A (1.6051) BS01 BGC ? N/A Q9UJ71 21112338
    174284 3p5h:A (1.6051) BS02 CA ? N/A Q9UJ71 21112338
    174285 3p5h:B (1.6051) BS01 BGC ? N/A Q9UJ71 21112338
    174286 3p5h:B (1.6051) BS02 CA ? N/A Q9UJ71 21112338
    174287 3p5h:C (1.6051) BS01 BGC ? N/A Q9UJ71 21112338
    174288 3p5h:C (1.6051) BS02 CA ? N/A Q9UJ71 21112338
    174289 3p5h:D (1.6051) BS01 BGC ? N/A Q9UJ71 21112338
    174290 3p5h:D (1.6051) BS02 CA ? N/A Q9UJ71 21112338
    174291 3p5i:A (1.8) BS01 G6S ? N/A Q9UJ71 21112338
    174292 3p5i:A (1.8) BS02 CA ? N/A Q9UJ71 21112338
    174293 3p5i:B (1.8) BS01 G6S ? N/A Q9UJ71 21112338
    174294 3p5i:B (1.8) BS02 CA ? N/A Q9UJ71 21112338
    174295 3p5i:C (1.8) BS01 G6S ? N/A Q9UJ71 21112338
    174296 3p5i:C (1.8) BS02 CA ? N/A Q9UJ71 21112338
    174297 3p5i:D (1.8) BS01 G6S ? N/A Q9UJ71 21112338
    174298 3p5i:D (1.8) BS02 CA ? N/A Q9UJ71 21112338
    174299 3p5k:A (2.09) BS01 P5K 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.076uM
    174300 3p5l:A (1.498) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22218610
    174301 3p5l:A (1.498) BS02 IT5 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 22218610 MOAD: Ki=40.8nM
    174302 3p5n:A (3.6) BS01 RBF ? GO:0005886 ... E5QVT2 20972419
    174303 3p5n:B (3.6) BS01 RBF ? GO:0005886 ... E5QVT2 20972419
    174304 3p5o:A (1.6) BS01 EAM ? N/A O60885 21068722 MOAD: Kd=55.2nM
    BindingDB: IC50=190nM, Ki=50nM, Kd=99nM
    174305 3p5p:A (1.816) BS01 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174306 3p5p:A (1.816) BS02 A3C 4.2.3.17 GO:0000287 ... Q41594 21160477
    174307 3p5p:A (1.816) BS03 A3C 4.2.3.17 GO:0000287 ... Q41594 21160477
    174308 3p5q:A (2.0) BS01 HEM ? GO:0004601 ... P69905 21636902
    174309 3p5q:B (2.0) BS01 HEM ? GO:0004601 ... P68871 21636902
    174310 3p5r:A (2.247) BS01 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174311 3p5r:A (2.247) BS02 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174312 3p5r:A (2.247) BS03 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174313 3p5r:A (2.247) BS04 FGG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174314 3p5r:B (2.247) BS01 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174315 3p5r:B (2.247) BS02 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174316 3p5r:B (2.247) BS03 MG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174317 3p5r:B (2.247) BS04 FGG 4.2.3.17 GO:0000287 ... Q41594 21160477
    174318 3p5s:A (1.95) BS01 AVU 2.4.99.20
    3.2.2.6
    GO:0061809 ... Q9TTF5 22529956
    174319 3p5s:B (1.95) BS01 AVU 2.4.99.20
    3.2.2.6
    GO:0061809 ... Q9TTF5 22529956
    174320 3p5u:A (1.5) BS01 CD 3.4.22.14 GO:0006508 ... A5HII2 21123873
    174321 3p5v:A (1.9) BS01 CD 3.4.22.14 GO:0006508 ... A5HII2 21123873
    174322 3p5x:A (2.2) BS01 CD 3.4.22.14 GO:0006508 ... A5HII2 21123873
    174323 3p5y:A (1.6) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174324 3p5y:A (1.6) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174325 3p5y:B (1.6) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174326 3p5y:B (1.6) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174327 3p5z:A (1.3) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174328 3p5z:A (1.3) BS02 POL 4.1.1.23 GO:0004590 ... O26232 23030629
    174329 3p5z:A (1.3) BS03 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174330 3p5z:B (1.3) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174331 3p5z:B (1.3) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174332 3p5z:B (1.3) BS03 POL 4.1.1.23 GO:0004590 ... O26232 23030629
    174333 3p60:A (1.4) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174334 3p60:A (1.4) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174335 3p60:B (1.4) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174336 3p60:B (1.4) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174337 3p61:A (1.396) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174338 3p61:A (1.396) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174339 3p61:B (1.396) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174340 3p61:B (1.396) BS02 BMP 4.1.1.23 GO:0004590 ... O26232 23030629
    174341 3p62:A (1.4) BS01 FMN 1.6.99.1 GO:0005829 ... P71278 21064170
    174342 3p63:A (2.3) BS01 FES ? GO:0009055 ... P00248 21266547
    174343 3p63:B (2.3) BS01 FES ? GO:0009055 ... P00248 21266547
    174344 3p64:A (1.3) BS01 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174345 3p64:A (1.3) BS02 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174346 3p65:A (2.1) BS01 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174347 3p65:A (2.1) BS02 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174348 3p65:A (2.1) BS03 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174349 3p66:A (1.36) BS01 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174350 3p66:A (1.36) BS02 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174351 3p66:A (1.36) BS03 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174352 3p66:A (1.36) BS04 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174353 3p67:A (1.5) BS01 FMN 1.6.99.1 GO:0005829 ... P71278 21064170
    174354 3p68:A (1.6) BS01 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174355 3p68:A (1.6) BS02 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174356 3p68:A (1.6) BS03 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174357 3p68:A (1.6) BS04 AU3 3.2.1.17 GO:0003796 ... P00698 21278750
    174358 3p6b:A (2.0) BS01 CA 3.2.1.91 GO:0016798 ... P0C2S1 21543854
    174359 3p6b:B (2.0) BS01 CA 3.2.1.91 GO:0016798 ... P0C2S1 21543854
    174360 3p6d:A (1.06) BS01 ZGB ? GO:0005319 ... P15090 25664790
    174361 3p6e:A (1.08) BS01 ZGC ? GO:0005319 ... P15090 25664790
    174362 3p6f:A (1.2) BS01 FBZ ? GO:0005319 ... P15090 25664790
    174363 3p6g:A (1.2) BS01 IZP ? GO:0005319 ... P15090 25664790
    174364 3p6h:A (1.15) BS01 IBP ? GO:0005319 ... P15090 25664790
    174365 3p6m:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174366 3p6m:A (2.0) BS02 DSO 1.14.15.1 GO:0004497 ... P00183 N/A
    174367 3p6n:A (1.7) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174368 3p6n:A (1.7) BS02 DSO 1.14.15.1 GO:0004497 ... P00183 N/A
    174369 3p6o:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174370 3p6o:A (2.0) BS02 ETG 1.14.15.1 GO:0004497 ... P00183 N/A
    174371 3p6p:A (1.9) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174372 3p6p:A (1.9) BS02 A6B 1.14.15.1 GO:0004497 ... P00183 N/A
    174373 3p6q:A (1.95) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174374 3p6r:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174375 3p6s:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174376 3p6t:A (1.9) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174377 3p6t:A (1.9) BS02 SBF 1.14.15.1 GO:0004497 ... P00183 N/A
    174378 3p6u:A (1.7) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174379 3p6v:A (2.0) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174380 3p6w:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174381 3p6x:A (1.65) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    174382 3p6y:A (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174383 3p6y:B (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174384 3p6y:E (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174385 3p6y:F (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174386 3p6y:I (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174387 3p6y:M (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174388 3p6y:N (2.9) BS01 rna ? GO:0003729 ... O43809 N/A
    174389 3p6z:B (1.7) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174390 3p6z:B (1.7) BS02 0G6 3.4.21.5 GO:0004252 ... P00734 21555742
    174391 3p6z:H (1.7) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174392 3p6z:H (1.7) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174393 3p6z:H (1.7) BS03 0G6 3.4.21.5 GO:0004252 ... P00734 21555742
    174394 3p70:B (2.55) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174395 3p70:B (2.55) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174396 3p70:B (2.55) BS03 BEN 3.4.21.5 GO:0004252 ... P00734 21555742
    174397 3p70:D (2.55) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174398 3p70:D (2.55) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 21555742
    174399 3p70:D (2.55) BS03 BEN 3.4.21.5 GO:0004252 ... P00734 21555742
    174400 3p70:F (2.55) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 21555742

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).