SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    177401 3q15:C (2.192) BS01 MG 2.7.-.- GO:0000156 ... P06628 21346797
    177402 3q15:D (2.192) BS01 MG 2.7.-.- GO:0000156 ... P06628 21346797
    177403 3q19:A (1.9) BS01 GSH 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... Q9H4Y5 22522127
    177404 3q19:B (1.9) BS01 GSH 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... Q9H4Y5 22522127
    177405 3q1d:A (2.15) BS01 ZN 6.3.2.- GO:0008270 ... Q9BYV2 N/A
    177406 3q1d:A (2.15) BS02 ZN 6.3.2.- GO:0008270 ... Q9BYV2 N/A
    177407 3q1e:A (1.95) BS01 T44 3.5.2.17 GO:0006144 ... Q06S87 21515285
    177408 3q1e:B (1.95) BS01 T44 3.5.2.17 GO:0006144 ... Q06S87 21515285
    177409 3q1e:C (1.95) BS01 T44 3.5.2.17 GO:0006144 ... Q06S87 21515285
    177410 3q1e:D (1.95) BS01 T44 3.5.2.17 GO:0006144 ... Q06S87 21515285
    177411 3q1f:A (1.5) BS01 YPP 3.5.2.6 GO:0008800 ... Q9L5C8 N/A
    177412 3q1f:A (1.5) BS02 YPP 3.5.2.6 GO:0008800 ... Q9L5C8 N/A
    177413 3q1f:B (1.5) BS01 YPP 3.5.2.6 GO:0008800 ... Q9L5C8 N/A
    177414 3q1f:B (1.5) BS02 YPP 3.5.2.6 GO:0008800 ... Q9L5C8 N/A
    177415 3q1g:A (2.5) BS01 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177416 3q1g:A (2.5) BS02 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177417 3q1g:B (2.5) BS01 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177418 3q1g:B (2.5) BS02 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177419 3q1g:C (2.5) BS01 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177420 3q1g:C (2.5) BS02 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177421 3q1g:D (2.5) BS01 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177422 3q1g:D (2.5) BS02 FE 1.14.13.208 GO:0005829 ... Q9AIX7 21632537
    177423 3q1i:A (1.4) BS01 peptide 2.7.11.21 N/A P53350 21472932
    177424 3q1k:A (2.202) BS01 ADP 6.3.2.4 GO:0005524 ... P0A1F0 N/A
    177425 3q1k:B (2.202) BS01 ADP 6.3.2.4 GO:0005524 ... P0A1F0 N/A
    177426 3q1k:C (2.202) BS01 ADP 6.3.2.4 GO:0005524 ... P0A1F0 N/A
    177427 3q1k:D (2.202) BS01 ADP 6.3.2.4 GO:0005524 ... P0A1F0 N/A
    177428 3q1l:A (2.3) BS01 DHL 1.2.1.11 GO:0004073 ... Q8DQ00 22039970
    177429 3q1l:B (2.3) BS01 DHL 1.2.1.11 GO:0004073 ... Q8DQ00 22039970
    177430 3q1l:C (2.3) BS01 DHL 1.2.1.11 GO:0004073 ... Q8DQ00 22039970
    177431 3q1l:D (2.3) BS01 DHL 1.2.1.11 GO:0004073 ... Q8DQ00 22039970
    177432 3q1m:A (3.2) BS01 dna ? GO:0003677 ... P39075 21690368
    177433 3q1m:A (3.2) BS02 M4A ? GO:0003677 ... P39075 21690368
    177434 3q1o:A (2.4) BS01 MG ? GO:0004659 ... O25583 23493556
    177435 3q1o:A (2.4) BS02 DMA ? GO:0004659 ... O25583 23493556
    177436 3q1o:A (2.4) BS03 DMA ? GO:0004659 ... O25583 23493556
    177437 3q1o:B (2.4) BS01 MG ? GO:0004659 ... O25583 23493556
    177438 3q1o:B (2.4) BS02 DMA ? GO:0004659 ... O25583 23493556
    177439 3q1o:B (2.4) BS03 DMA ? GO:0004659 ... O25583 23493556
    177440 3q1o:C (2.4) BS01 MG ? GO:0004659 ... O25583 23493556
    177441 3q1o:C (2.4) BS02 DMA ? GO:0004659 ... O25583 23493556
    177442 3q1o:C (2.4) BS03 DMA ? GO:0004659 ... O25583 23493556
    177443 3q1o:D (2.4) BS01 MG ? GO:0004659 ... O25583 23493556
    177444 3q1o:D (2.4) BS02 DMA ? GO:0004659 ... O25583 23493556
    177445 3q1o:D (2.4) BS03 DMA ? GO:0004659 ... O25583 23493556
    177446 3q1q:A (3.8) BS01 rna 3.1.26.5 GO:0000049 ... Q9X1H4 21076397
    177447 3q1r:A (4.21) BS01 rna 3.1.26.5 GO:0000049 ... Q9X1H4 21076397
    177448 3q1x:A (1.59) BS01 SER 2.3.1.30 GO:0009001 ... Q9U8X2 21297164
    177449 3q22:A (2.11) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177450 3q22:A (2.11) BS02 GTP 2.7.7.6 N/A Q859P9 21321236
    177451 3q22:A (2.11) BS03 GTP 2.7.7.6 N/A Q859P9 21321236
    177452 3q22:A (2.11) BS04 2HP 2.7.7.6 N/A Q859P9 21321236
    177453 3q22:A (2.11) BS05 MG 2.7.7.6 N/A Q859P9 21321236
    177454 3q22:B (2.11) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177455 3q22:B (2.11) BS02 GTP 2.7.7.6 N/A Q859P9 21321236
    177456 3q22:B (2.11) BS03 2HP 2.7.7.6 N/A Q859P9 21321236
    177457 3q22:B (2.11) BS04 MG 2.7.7.6 N/A Q859P9 21321236
    177458 3q22:B (2.11) BS05 GTP 2.7.7.6 N/A Q859P9 21321236
    177459 3q23:A (1.8) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177460 3q23:A (1.8) BS02 G2P 2.7.7.6 N/A Q859P9 21321236
    177461 3q23:A (1.8) BS03 MN 2.7.7.6 N/A Q859P9 21321236
    177462 3q23:A (1.8) BS04 MN 2.7.7.6 N/A Q859P9 21321236
    177463 3q23:A (1.8) BS05 2HP 2.7.7.6 N/A Q859P9 21321236
    177464 3q23:A (1.8) BS06 G2P 2.7.7.6 N/A Q859P9 21321236
    177465 3q23:B (1.8) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177466 3q23:B (1.8) BS02 G2P 2.7.7.6 N/A Q859P9 21321236
    177467 3q23:B (1.8) BS03 G2P 2.7.7.6 N/A Q859P9 21321236
    177468 3q23:B (1.8) BS04 MN 2.7.7.6 N/A Q859P9 21321236
    177469 3q23:B (1.8) BS05 MN 2.7.7.6 N/A Q859P9 21321236
    177470 3q23:B (1.8) BS06 2HP 2.7.7.6 N/A Q859P9 21321236
    177471 3q24:A (1.81) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177472 3q24:A (1.81) BS02 GTP 2.7.7.6 N/A Q859P9 21321236
    177473 3q24:A (1.81) BS03 G 2.7.7.6 N/A Q859P9 21321236
    177474 3q24:A (1.81) BS04 2HP 2.7.7.6 N/A Q859P9 21321236
    177475 3q24:A (1.81) BS05 POP 2.7.7.6 N/A Q859P9 21321236
    177476 3q24:B (1.81) BS01 dna 2.7.7.6 N/A Q859P9 21321236
    177477 3q24:B (1.81) BS02 2HP 2.7.7.6 N/A Q859P9 21321236
    177478 3q24:B (1.81) BS03 POP 2.7.7.6 N/A Q859P9 21321236
    177479 3q25:A (1.9) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177480 3q25:A (1.9) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177481 3q26:A (1.54) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177482 3q26:A (1.54) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177483 3q27:A (1.302) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177484 3q27:A (1.302) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177485 3q28:A (1.6) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177486 3q28:A (1.6) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177487 3q29:A (2.3) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177488 3q29:A (2.3) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177489 3q29:C (2.3) BS01 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177490 3q29:C (2.3) BS02 GLC ? GO:0005515 ... P0AEX9
    P37840
    21462277
    177491 3q2a:A (1.99) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177492 3q2a:A (1.99) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177493 3q2a:A (1.99) BS03 PAB 1.14.13.236 GO:0016491 ... Q00456 22264099
    177494 3q2a:A (1.99) BS04 PAB 1.14.13.236 GO:0016491 ... Q00456 22264099
    177495 3q2a:A (1.99) BS05 PAB 1.14.13.236 GO:0016491 ... Q00456 22264099
    177496 3q2a:A (1.99) BS06 PAB 1.14.13.236 GO:0016491 ... Q00456 22264099
    177497 3q2a:B (1.99) BS01 PAB 1.14.13.236 GO:0016491 ... Q00460 22264099
    177498 3q2d:A (2.19) BS01 3NY N/A GO:0004139 ... N/A 21277311
    177499 3q2d:B (2.19) BS01 3NY N/A GO:0004139 ... N/A 21277311
    177500 3q2f:A (2.06) BS01 OAM ? N/A Q9UIF8 N/A
    177501 3q2g:A (2.3) BS01 QGF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=3.5nM
    177502 3q2g:A (2.3) BS02 ZN 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177503 3q2g:A (2.3) BS03 MG 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177504 3q2g:B (2.3) BS01 QGF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=3.5nM
    177505 3q2g:B (2.3) BS02 ZN 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177506 3q2h:A (2.33) BS01 ZN 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177507 3q2h:A (2.33) BS02 MG 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177508 3q2h:A (2.33) BS03 QHF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=0.69nM
    177509 3q2h:B (2.33) BS01 ZN 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177510 3q2h:B (2.33) BS02 MG 3.4.24.- GO:0004222 ... Q9UHI8 21300546
    177511 3q2h:B (2.33) BS03 QHF 3.4.24.- GO:0004222 ... Q9UHI8 21300546 MOAD: ic50=0.69nM
    177512 3q2i:A (1.5) BS01 NAI ? GO:0000166 ... Q7NQL0 21241053
    177513 3q2i:A (1.5) BS02 HP7 ? GO:0000166 ... Q7NQL0 21241053
    177514 3q2j:A (2.1501) BS01 CA 2.7.1.95 GO:0005524 ... P0A3Y5 21573013
    177515 3q2j:A (2.1501) BS02 CKI 2.7.1.95 GO:0005524 ... P0A3Y5 21573013
    177516 3q2j:B (2.1501) BS01 CA 2.7.1.95 GO:0005524 ... P0A3Y5 21573013
    177517 3q2j:B (2.1501) BS02 CKI 2.7.1.95 GO:0005524 ... P0A3Y5 21573013
    177518 3q2k:A (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177519 3q2k:A (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177520 3q2k:B (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177521 3q2k:B (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177522 3q2k:C (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177523 3q2k:C (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177524 3q2k:D (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177525 3q2k:D (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177526 3q2k:D (2.13) BS03 HP7 ? GO:0000166 ... Q79H45 21241053
    177527 3q2k:E (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177528 3q2k:E (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177529 3q2k:F (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177530 3q2k:F (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177531 3q2k:G (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177532 3q2k:G (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177533 3q2k:H (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177534 3q2k:H (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177535 3q2k:I (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177536 3q2k:I (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177537 3q2k:J (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177538 3q2k:J (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177539 3q2k:K (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177540 3q2k:K (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177541 3q2k:L (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177542 3q2k:L (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177543 3q2k:M (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177544 3q2k:M (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177545 3q2k:N (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177546 3q2k:N (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177547 3q2k:O (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177548 3q2k:O (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177549 3q2k:P (2.13) BS01 NAI ? GO:0000166 ... Q79H45 21241053
    177550 3q2k:P (2.13) BS02 HP7 ? GO:0000166 ... Q79H45 21241053
    177551 3q2l:A (2.7) BS01 CA ? GO:0005509 ... P09803 21300292
    177552 3q2l:A (2.7) BS02 CA ? GO:0005509 ... P09803 21300292
    177553 3q2l:A (2.7) BS03 CA ? GO:0005509 ... P09803 21300292
    177554 3q2l:A (2.7) BS04 CA ? GO:0005509 ... P09803 21300292
    177555 3q2l:B (2.7) BS01 CA ? GO:0005509 ... P09803 21300292
    177556 3q2l:B (2.7) BS02 CA ? GO:0005509 ... P09803 21300292
    177557 3q2l:B (2.7) BS03 CA ? GO:0005509 ... P09803 21300292
    177558 3q2l:B (2.7) BS04 CA ? GO:0005509 ... P09803 21300292
    177559 3q2m:A (2.9) BS01 CKI ? N/A O06916 21573013
    177560 3q2n:A (2.73) BS01 CA ? GO:0005509 ... P09803 21300292
    177561 3q2n:A (2.73) BS02 CA ? GO:0005509 ... P09803 21300292
    177562 3q2n:A (2.73) BS03 CA ? GO:0005509 ... P09803 21300292
    177563 3q2n:A (2.73) BS04 CA ? GO:0005509 ... P09803 21300292
    177564 3q2n:B (2.73) BS01 CA ? GO:0005509 ... P09803 21300292
    177565 3q2n:B (2.73) BS02 CA ? GO:0005509 ... P09803 21300292
    177566 3q2n:B (2.73) BS03 CA ? GO:0005509 ... P09803 21300292
    177567 3q2n:B (2.73) BS04 CA ? GO:0005509 ... P09803 21300292
    177568 3q2o:B (1.96) BS01 MG N/A GO:0004638 ... N/A 21931218
    177569 3q2q:A (1.9) BS01 DMA 2.5.1.30 GO:0000010 ... Q8NT37 23493556
    177570 3q2q:A (1.9) BS02 CA 2.5.1.30 GO:0000010 ... Q8NT37 23493556
    177571 3q2q:A (1.9) BS03 CA 2.5.1.30 GO:0000010 ... Q8NT37 23493556
    177572 3q2r:A (2.2) BS01 ZN ? GO:0005576 ... P48060 21931216
    177573 3q2t:A (3.061) BS01 rna ? GO:0003682 ... O43809 21295486
    177574 3q2t:B (3.061) BS01 rna ? GO:0003682 ... O43809 21295486
    177575 3q2v:A (3.4) BS01 CA ? GO:0005509 ... P09803 21300292
    177576 3q2v:A (3.4) BS02 CA ? GO:0005509 ... P09803 21300292
    177577 3q2v:A (3.4) BS03 CA ? GO:0005509 ... P09803 21300292
    177578 3q2v:A (3.4) BS04 CA ? GO:0005509 ... P09803 21300292
    177579 3q2v:A (3.4) BS05 CA ? GO:0005509 ... P09803 21300292
    177580 3q2v:A (3.4) BS06 CA ? GO:0005509 ... P09803 21300292
    177581 3q2v:A (3.4) BS07 CA ? GO:0005509 ... P09803 21300292
    177582 3q2v:A (3.4) BS08 CA ? GO:0005509 ... P09803 21300292
    177583 3q2v:A (3.4) BS09 CA ? GO:0005509 ... P09803 21300292
    177584 3q2v:A (3.4) BS10 CA ? GO:0005509 ... P09803 21300292
    177585 3q2v:A (3.4) BS11 CA ? GO:0005509 ... P09803 21300292
    177586 3q2v:A (3.4) BS12 CA ? GO:0005509 ... P09803 21300292
    177587 3q2v:A (3.4) BS13 MAN ? GO:0005509 ... P09803 21300292
    177588 3q2v:A (3.4) BS14 MAN ? GO:0005509 ... P09803 21300292
    177589 3q2v:A (3.4) BS15 MAN ? GO:0005509 ... P09803 21300292
    177590 3q2v:A (3.4) BS16 MAN ? GO:0005509 ... P09803 21300292
    177591 3q2v:A (3.4) BS17 MAN ? GO:0005509 ... P09803 21300292
    177592 3q2v:A (3.4) BS18 MAN ? GO:0005509 ... P09803 21300292
    177593 3q2v:B (3.4) BS01 CA ? GO:0005509 ... P09803 21300292
    177594 3q2v:B (3.4) BS02 CA ? GO:0005509 ... P09803 21300292
    177595 3q2v:B (3.4) BS03 CA ? GO:0005509 ... P09803 21300292
    177596 3q2v:B (3.4) BS04 CA ? GO:0005509 ... P09803 21300292
    177597 3q2v:B (3.4) BS05 CA ? GO:0005509 ... P09803 21300292
    177598 3q2v:B (3.4) BS06 CA ? GO:0005509 ... P09803 21300292
    177599 3q2v:B (3.4) BS07 CA ? GO:0005509 ... P09803 21300292
    177600 3q2v:B (3.4) BS08 CA ? GO:0005509 ... P09803 21300292

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).