SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    177601 3q2v:B (3.4) BS09 CA ? GO:0005509 ... P09803 21300292
    177602 3q2v:B (3.4) BS10 CA ? GO:0005509 ... P09803 21300292
    177603 3q2v:B (3.4) BS11 CA ? GO:0005509 ... P09803 21300292
    177604 3q2v:B (3.4) BS12 CA ? GO:0005509 ... P09803 21300292
    177605 3q2v:B (3.4) BS13 MAN ? GO:0005509 ... P09803 21300292
    177606 3q2v:B (3.4) BS14 MAN ? GO:0005509 ... P09803 21300292
    177607 3q2v:B (3.4) BS15 MAN ? GO:0005509 ... P09803 21300292
    177608 3q2v:B (3.4) BS16 MAN ? GO:0005509 ... P09803 21300292
    177609 3q2v:B (3.4) BS17 MAN ? GO:0005509 ... P09803 21300292
    177610 3q2v:B (3.4) BS18 MAN ? GO:0005509 ... P09803 21300292
    177611 3q2w:A (3.2) BS01 CA ? GO:0005509 ... P15116 21300292
    177612 3q2w:A (3.2) BS02 CA ? GO:0005509 ... P15116 21300292
    177613 3q2w:A (3.2) BS03 CA ? GO:0005509 ... P15116 21300292
    177614 3q2w:A (3.2) BS04 CA ? GO:0005509 ... P15116 21300292
    177615 3q2w:A (3.2) BS05 CA ? GO:0005509 ... P15116 21300292
    177616 3q2w:A (3.2) BS06 CA ? GO:0005509 ... P15116 21300292
    177617 3q2w:A (3.2) BS07 CA ? GO:0005509 ... P15116 21300292
    177618 3q2w:A (3.2) BS08 CA ? GO:0005509 ... P15116 21300292
    177619 3q2w:A (3.2) BS09 CA ? GO:0005509 ... P15116 21300292
    177620 3q2w:A (3.2) BS10 CA ? GO:0005509 ... P15116 21300292
    177621 3q2w:A (3.2) BS11 CA ? GO:0005509 ... P15116 21300292
    177622 3q2w:A (3.2) BS12 CA ? GO:0005509 ... P15116 21300292
    177623 3q2w:A (3.2) BS13 MAN ? GO:0005509 ... P15116 21300292
    177624 3q2w:A (3.2) BS14 MAN ? GO:0005509 ... P15116 21300292
    177625 3q2w:A (3.2) BS15 MAN ? GO:0005509 ... P15116 21300292
    177626 3q2w:A (3.2) BS16 MAN ? GO:0005509 ... P15116 21300292
    177627 3q2w:A (3.2) BS17 MAN ? GO:0005509 ... P15116 21300292
    177628 3q2w:A (3.2) BS18 MAN ? GO:0005509 ... P15116 21300292
    177629 3q2y:A (2.95) BS01 dna ? GO:0003677 ... P39075 21690368
    177630 3q2z:A (2.0) BS01 D9A 2.5.1.21 GO:0008610 ... P37268 21353782
    177631 3q30:A (2.0) BS01 MG 2.5.1.21 GO:0008610 ... P37268 21353782
    177632 3q30:A (2.0) BS02 MG 2.5.1.21 GO:0008610 ... P37268 21353782
    177633 3q30:A (2.0) BS03 D61 2.5.1.21 GO:0008610 ... P37268 21353782
    177634 3q31:A (2.703) BS01 ZN 4.2.1.1 GO:0004089 ... Q2TWF5 N/A
    177635 3q31:B (2.703) BS01 ZN 4.2.1.1 GO:0004089 ... Q2TWF5 N/A
    177636 3q32:A (2.5) BS01 J2I 2.7.10.2 GO:0004672 ... O60674 21282055 MOAD: ic50=0.0018uM
    BindingDB: IC50=1.8nM
    177637 3q32:B (2.5) BS01 J2I 2.7.10.2 GO:0004672 ... O60674 21282055 MOAD: ic50=0.0018uM
    BindingDB: IC50=1.8nM
    177638 3q33:A (2.8) BS01 peptide 2.3.1.48 GO:0000785 ... Q07794 21256037
    177639 3q33:A (2.8) BS02 ACO 2.3.1.48 GO:0000785 ... Q07794 21256037
    177640 3q33:B (2.8) BS01 peptide ? GO:0005634 ... P53853 21256037
    177641 3q34:A (1.7) BS01 UQ8 ? N/A Q48EL2 N/A
    177642 3q34:B (1.7) BS01 UQ8 ? N/A Q48EL2 N/A
    177643 3q34:C (1.7) BS01 UQ8 ? N/A Q48EL2 N/A
    177644 3q34:D (1.7) BS01 UQ8 ? N/A Q48EL2 N/A
    177645 3q35:A (3.3) BS01 ACO 2.3.1.48 GO:0000785 ... Q07794 21256037
    177646 3q36:A (2.5) BS01 SF4 2.7.7.- GO:0006269 ... P49643 21346410
    177647 3q36:B (2.5) BS01 SF4 2.7.7.- GO:0006269 ... P49643 21346410
    177648 3q38:A (1.28) BS01 FUC ? N/A Q5F4T5 21525337
    177649 3q39:A (1.25) BS01 FUC ? N/A Q5F4T5 21525337
    177650 3q39:B (1.25) BS01 FUC ? N/A Q5F4T5 21525337
    177651 3q3a:A (1.4) BS01 FUL ? N/A Q5F4T5 21525337
    177652 3q3a:B (1.4) BS01 GAL ? N/A Q5F4T5 21525337
    177653 3q3a:B (1.4) BS02 FUL ? N/A Q5F4T5 21525337
    177654 3q3b:A (2.7) BS01 55E 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 21295469
    177655 3q3b:B (2.7) BS01 55E 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 21295469
    177656 3q3c:A (2.299) BS01 NAD 1.1.1.387 GO:0006565 ... Q9I5I6 22128181
    177657 3q3d:A (2.79) BS01 dna ? GO:0003677 ... P39075 21690368
    177658 3q3d:A (2.79) BS02 PUY ? GO:0003677 ... P39075 21690368
    177659 3q3g:E (2.7) BS01 CA ? N/A P11215 22095715
    177660 3q3g:G (2.7) BS01 CA ? N/A P11215 22095715
    177661 3q3g:I (2.7) BS01 CA ? N/A P11215 22095715
    177662 3q3g:L (2.7) BS01 CA ? N/A P11215 22095715
    177663 3q3h:A (2.25) BS01 UDP N/A N/A N/A 21908603
    177664 3q3h:B (2.25) BS01 UDP N/A N/A N/A 21908603
    177665 3q3j:B (1.971) BS01 GNP ? GO:0003924 ... Q92730 N/A
    177666 3q3j:B (1.971) BS02 MG ? GO:0003924 ... Q92730 N/A
    177667 3q3k:A (2.0) BS01 CA 3.4.21.6 GO:0004252 ... P00742 21345673
    177668 3q3k:A (2.0) BS02 CA 3.4.21.6 GO:0004252 ... P00742 21345673
    177669 3q3k:A (2.0) BS03 D90 3.4.21.6 GO:0004252 ... P00742 21345673 MOAD: ic50=7.4nM
    BindingDB: IC50=7.4nM
    177670 3q3l:A (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177671 3q3l:B (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177672 3q3l:C (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177673 3q3l:D (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177674 3q3l:E (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177675 3q3l:F (2.5) BS01 CA 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177676 3q3m:A (1.748) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177677 3q3m:A (1.748) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177678 3q3m:A (1.748) BS03 Z82 1.14.13.236 GO:0016491 ... Q00456 22264099
    177679 3q3m:A (1.748) BS04 Z82 1.14.13.236 GO:0016491 ... Q00456 22264099
    177680 3q3m:B (1.748) BS01 Z82 1.14.13.236 GO:0016491 ... Q00460 22264099
    177681 3q3m:B (1.748) BS02 Z82 1.14.13.236 GO:0016491 ... Q00460 22264099
    177682 3q3m:D (1.748) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177683 3q3m:D (1.748) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177684 3q3m:D (1.748) BS03 Z82 1.14.13.236 GO:0016491 ... Q00456 22264099
    177685 3q3m:D (1.748) BS04 Z82 1.14.13.236 GO:0016491 ... Q00456 22264099
    177686 3q3m:E (1.748) BS01 Z82 1.14.13.- GO:0004497 ... Q00459 22264099
    177687 3q3m:F (1.748) BS01 Z82 1.14.13.236 GO:0016491 ... Q00460 22264099
    177688 3q3m:H (1.748) BS01 Z82 1.14.13.- GO:0004497 ... Q00459 22264099
    177689 3q3n:A (1.84) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177690 3q3n:A (1.84) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177691 3q3n:A (1.84) BS03 NPO 1.14.13.236 GO:0016491 ... Q00456 22264099
    177692 3q3n:A (1.84) BS04 NPO 1.14.13.236 GO:0016491 ... Q00456 22264099
    177693 3q3n:A (1.84) BS05 NPO 1.14.13.236 GO:0016491 ... Q00456 22264099
    177694 3q3o:A (1.95) BS01 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177695 3q3o:A (1.95) BS02 FE 1.14.13.236 GO:0016491 ... Q00456 22264099
    177696 3q3o:A (1.95) BS03 IPH 1.14.13.236 GO:0016491 ... Q00456 22264099
    177697 3q3o:A (1.95) BS04 IPH 1.14.13.236 GO:0016491 ... Q00456 22264099
    177698 3q3o:A (1.95) BS05 IPH 1.14.13.236 GO:0016491 ... Q00456 22264099
    177699 3q3o:A (1.95) BS06 IPH 1.14.13.236 GO:0016491 ... Q00456 22264099
    177700 3q3o:B (1.95) BS01 IPH 1.14.13.236 GO:0016491 ... Q00460 22264099
    177701 3q3q:A (1.953) BS01 ZN 3.1.3.1 GO:0004035 ... A1YYW7 21829507
    177702 3q3q:A (1.953) BS02 ZN 3.1.3.1 GO:0004035 ... A1YYW7 21829507
    177703 3q3q:A (1.953) BS03 CA 3.1.3.1 GO:0004035 ... A1YYW7 21829507
    177704 3q3q:A (1.953) BS04 KOP 3.1.3.1 GO:0004035 ... A1YYW7 21829507
    177705 3q3s:A (2.0) BS01 O8B ? GO:0000976 ... P9WMC1 N/A BindingDB: EC50=>10000nM
    177706 3q3t:A (2.6) BS01 RX0 3.4.23.15 GO:0004190 ... P00797 21741239 BindingDB: IC50=37nM
    177707 3q3t:B (2.6) BS01 RX0 3.4.23.15 GO:0004190 ... P00797 21741239 BindingDB: IC50=37nM
    177708 3q3u:A (1.85) BS01 HEM 1.11.1.- GO:0000302 ... Q60FD2 21367853
    177709 3q3u:A (1.85) BS02 CA 1.11.1.- GO:0000302 ... Q60FD2 21367853
    177710 3q3u:A (1.85) BS03 CA 1.11.1.- GO:0000302 ... Q60FD2 21367853
    177711 3q3y:A (1.32) BS01 XNV 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0004197 ... Q5DSM6 21835784
    177712 3q3y:B (1.32) BS01 XNV 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0004197 ... Q5DSM6 21835784
    177713 3q40:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    177714 3q40:A (1.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    177715 3q43:A (1.8) BS01 ZN 3.4.11.- GO:0006508 ... O96935 21366301
    177716 3q43:A (1.8) BS02 D66 3.4.11.- GO:0006508 ... O96935 21366301 MOAD: Ki=43nM
    BindingDB: Ki=43nM
    177717 3q44:A (1.8) BS01 ZN 3.4.11.- GO:0006508 ... O96935 21366301
    177718 3q44:A (1.8) BS02 D50 3.4.11.- GO:0006508 ... O96935 21366301 MOAD: Ki=490nM
    BindingDB: Ki=490nM
    177719 3q45:A (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177720 3q45:A (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177721 3q45:A (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177722 3q45:B (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177723 3q45:B (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177724 3q45:B (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177725 3q45:C (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177726 3q45:C (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177727 3q45:C (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177728 3q45:D (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177729 3q45:D (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177730 3q45:D (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177731 3q45:E (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177732 3q45:E (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177733 3q45:E (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177734 3q45:F (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177735 3q45:F (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177736 3q45:F (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177737 3q45:G (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177738 3q45:G (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177739 3q45:G (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177740 3q45:H (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177741 3q45:H (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177742 3q45:H (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177743 3q45:I (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177744 3q45:I (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177745 3q45:I (3.0) BS03 VAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177746 3q46:A (0.99) BS01 MG 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177747 3q46:A (0.99) BS02 MG 3.6.1.1 GO:0000287 ... H2L2L6 23192028
    177748 3q47:B (1.705) BS01 peptide 2.3.2.27 N/A Q9WUD1 21454478
    177749 3q49:B (1.543) BS01 peptide 2.3.2.27 N/A Q9WUD1 21454478
    177750 3q4a:B (1.542) BS01 peptide 2.3.2.27 N/A Q9WUD1 21454478
    177751 3q4b:A (2.19) BS01 RX5 3.4.23.15 GO:0004190 ... P00797 24900262 BindingDB: IC50=0.47nM
    177752 3q4b:B (2.19) BS01 RX5 3.4.23.15 GO:0004190 ... P00797 24900262 BindingDB: IC50=0.47nM
    177753 3q4c:A (3.2) BS01 RSW 2.7.11.1 GO:0004672 ... P15056 19371126
    177754 3q4d:A (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177755 3q4d:A (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177756 3q4d:A (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177757 3q4d:B (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177758 3q4d:B (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177759 3q4d:B (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177760 3q4d:C (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177761 3q4d:C (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177762 3q4d:C (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177763 3q4d:D (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177764 3q4d:D (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177765 3q4d:D (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177766 3q4d:E (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177767 3q4d:E (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177768 3q4d:E (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177769 3q4d:F (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177770 3q4d:F (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177771 3q4d:F (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177772 3q4d:G (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177773 3q4d:G (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177774 3q4d:G (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177775 3q4d:H (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177776 3q4d:H (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177777 3q4d:H (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177778 3q4d:I (3.0) BS01 MG 5.1.1.- GO:0000287 ... Q11T61 22392983
    177779 3q4d:I (3.0) BS02 DAL 5.1.1.- GO:0000287 ... Q11T61 22392983
    177780 3q4d:I (3.0) BS03 ALA 5.1.1.- GO:0000287 ... Q11T61 22392983
    177781 3q4g:A (2.4) BS01 CA 6.3.1.5 GO:0003952 ... Q9KMW1 N/A
    177782 3q4j:B (2.3) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177783 3q4j:C (2.3) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177784 3q4j:D (2.3) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177785 3q4j:E (2.3) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177786 3q4j:F (2.3) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177787 3q4k:A (2.6) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177788 3q4k:B (2.6) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177789 3q4l:A (1.95) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177790 3q4l:B (1.95) BS01 peptide 2.7.7.7 GO:0003677 ... P0A988 21619076
    177791 3q4o:A (1.34) BS01 MG ? N/A Q58164 21604308
    177792 3q4p:A (1.8) BS01 M7G 3.2.2.22 GO:0017148 ... D9J2T9 N/A
    177793 3q4q:A (1.75) BS01 MN ? N/A Q58164 21604308
    177794 3q4q:A (1.75) BS02 MN ? N/A Q58164 21604308
    177795 3q4r:A (1.6) BS01 ZN ? N/A Q58164 21604308
    177796 3q4r:A (1.6) BS02 ZN ? N/A Q58164 21604308
    177797 3q4t:A (1.96) BS01 TAK 2.7.11.30 GO:0004672 ... P27037 25368322
    177798 3q4t:B (1.96) BS01 TAK 2.7.11.30 GO:0004672 ... P27037 25368322
    177799 3q4u:A (1.82) BS01 LDN 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=17nM
    177800 3q4u:A (1.82) BS02 LDN 2.7.11.30 GO:0004672 ... Q04771 23646137 BindingDB: IC50=17nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).