SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    180001 3quy:A (2.25) BS02 QUY ? N/A P11609 21552205 MOAD: Kd=187nM
    180002 3quy:C (2.25) BS01 QUY N/A N/A N/A 21552205
    180003 3quz:A (2.3) BS01 FUC ? N/A P11609 21552205
    180004 3quz:A (2.3) BS02 QUV ? N/A P11609 21552205 MOAD: Kd=39.6nM
    180005 3quz:C (2.3) BS01 QUV N/A N/A N/A 21552205
    180006 3qv1:A (2.0) BS01 peptide 1.2.1.13 GO:0006006 ... P25856 22514274
    180007 3qv1:A (2.0) BS02 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180008 3qv1:B (2.0) BS01 peptide 1.2.1.13 GO:0006006 ... P25856 22514274
    180009 3qv1:B (2.0) BS02 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180010 3qv1:C (2.0) BS01 peptide 1.2.1.13 GO:0006006 ... P25856 22514274
    180011 3qv1:C (2.0) BS02 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180012 3qv1:D (2.0) BS01 peptide 1.2.1.13 GO:0006006 ... P25856 22514274
    180013 3qv1:D (2.0) BS02 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180014 3qv1:E (2.0) BS01 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180015 3qv1:F (2.0) BS01 peptide 1.2.1.13 GO:0006006 ... P25856 22514274
    180016 3qv1:F (2.0) BS02 NAD 1.2.1.13 GO:0006006 ... P25856 22514274
    180017 3qv2:A (2.15) BS01 SAH 2.1.1.37 GO:0003886 ... Q6Q386 N/A
    180018 3qv4:C (2.7) BS01 DGL ? GO:0001818 ... Q9GK12 N/A
    180019 3qv6:A (2.85) BS01 QV6 2.7.1.40 GO:0000287 ... Q27686 21733839
    180020 3qv7:A (2.7) BS01 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180021 3qv7:A (2.7) BS02 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180022 3qv7:B (2.7) BS01 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180023 3qv7:B (2.7) BS02 QV8 2.7.1.40 GO:0000287 ... Q27686 21733839
    180024 3qv7:B (2.7) BS03 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180025 3qv7:D (2.7) BS01 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180026 3qv7:D (2.7) BS02 QV7 2.7.1.40 GO:0000287 ... Q27686 21733839
    180027 3qv8:A (2.45) BS01 S62 2.7.1.40 GO:0000287 ... Q27686 21733839
    180028 3qv8:D (2.45) BS01 S62 2.7.1.40 GO:0000287 ... Q27686 21733839
    180029 3qv9:B (2.1) BS01 QV7 2.7.1.40 GO:0000287 ... Q4D9Z4 21733839
    180030 3qvb:A (2.26) BS01 MN 2.4.1.186 GO:0016757 ... P46976 22160680
    180031 3qvb:A (2.26) BS02 UDP 2.4.1.186 GO:0016757 ... P46976 22160680
    180032 3qvd:A (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180033 3qvd:A (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180034 3qvd:A (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180035 3qvd:A (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180036 3qvd:A (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180037 3qvd:B (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180038 3qvd:B (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    180039 3qvd:B (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180040 3qvd:B (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180041 3qvd:B (2.0) BS05 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180042 3qvd:C (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180043 3qvd:C (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180044 3qvd:C (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180045 3qvd:C (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180046 3qvd:C (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180047 3qvd:D (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180048 3qvd:D (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180049 3qvd:D (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180050 3qvd:D (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180051 3qvd:D (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180052 3qvd:E (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180053 3qvd:E (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180054 3qvd:E (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180055 3qvd:E (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180056 3qvd:E (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180057 3qvd:F (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180058 3qvd:F (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180059 3qvd:F (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180060 3qvd:F (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180061 3qvd:F (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180062 3qvd:G (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180063 3qvd:G (2.0) BS02 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180064 3qvd:G (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180065 3qvd:G (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180066 3qvd:G (2.0) BS05 FE ? GO:0005506 ... Q9UWP7 21647777
    180067 3qvd:H (2.0) BS01 PEO ? GO:0005506 ... Q9UWP7 21647777
    180068 3qvd:H (2.0) BS02 FE ? GO:0005506 ... Q9UWP7 21647777
    180069 3qvd:H (2.0) BS03 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180070 3qvd:H (2.0) BS04 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180071 3qvd:H (2.0) BS05 FE2 ? GO:0005506 ... Q9UWP7 21647777
    180072 3qvf:A (1.85) BS01 ADP 2.7.4.26 GO:0004349 ... Q56187 21728358
    180073 3qvf:A (1.85) BS02 FV1 2.7.4.26 GO:0004349 ... Q56187 21728358
    180074 3qvh:A (1.85) BS01 ADP 2.7.4.26 GO:0004349 ... Q56187 21728358
    180075 3qvi:A (2.5) BS01 K95 3.4.23.39 GO:0004190 ... Q9Y006 21928835
    180076 3qvi:C (2.5) BS01 K95 3.4.23.39 GO:0004190 ... Q9Y006 21928835
    180077 3qvi:C (2.5) BS02 K95 3.4.23.39 GO:0004190 ... Q9Y006 21928835
    180078 3qvi:D (2.5) BS01 K95 3.4.23.39 GO:0004190 ... Q9Y006 21928835
    180079 3qvi:D (2.5) BS02 K95 3.4.23.39 GO:0004190 ... Q9Y006 21928835
    180080 3qvk:A (1.999) BS01 2AL ? GO:0036348 ... A6T9E8 21616082
    180081 3qvk:B (1.999) BS01 2AL ? GO:0036348 ... A6T9E8 21616082
    180082 3qvl:A (1.822) BS01 5HY ? GO:0036348 ... A6T9E8 21616082
    180083 3qvl:B (1.822) BS01 5HY ? GO:0036348 ... A6T9E8 21616082
    180084 3qvn:A (2.6) BS01 MN 1.15.1.1 GO:0004784 ... Q96UT6 22077216
    180085 3qvo:A (2.3) BS01 MNB N/A N/A N/A N/A
    180086 3qvp:A (1.2) BS01 FAD 1.1.3.4 GO:0005576 ... P13006 21568312
    180087 3qvq:A (1.602) BS01 G3P N/A GO:0006629 ... N/A N/A
    180088 3qvq:A (1.602) BS02 MG N/A GO:0006629 ... N/A N/A
    180089 3qvq:B (1.602) BS01 G3P N/A GO:0006629 ... N/A N/A
    180090 3qvq:B (1.602) BS02 MG N/A GO:0006629 ... N/A N/A
    180091 3qvq:B (1.602) BS03 MG N/A GO:0006629 ... N/A N/A
    180092 3qvq:C (1.602) BS01 G3P N/A GO:0006629 ... N/A N/A
    180093 3qvq:C (1.602) BS02 MG N/A GO:0006629 ... N/A N/A
    180094 3qvq:C (1.602) BS03 MG N/A GO:0006629 ... N/A N/A
    180095 3qvq:D (1.602) BS01 G3P N/A GO:0006629 ... N/A N/A
    180096 3qvq:D (1.602) BS02 MG N/A GO:0006629 ... N/A N/A
    180097 3qvq:D (1.602) BS03 MG N/A GO:0006629 ... N/A N/A
    180098 3qvr:A (1.3) BS01 FAD 1.1.3.4 GO:0005576 ... P13006 21568312
    180099 3qvs:A (1.7) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180100 3qvs:A (1.7) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180101 3qvs:A (1.7) BS03 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180102 3qvt:A (2.0) BS01 NAI 5.5.1.4 GO:0004512 ... O28480 22261071
    180103 3qvt:A (2.0) BS02 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180104 3qvt:A (2.0) BS03 KPG 5.5.1.4 GO:0004512 ... O28480 22261071
    180105 3qvu:A (2.5) BS01 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    180106 3qvu:A (2.5) BS02 A3P 2.8.2.1 GO:0004062 ... P50225 21723874
    180107 3qvu:B (2.5) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 21723874
    180108 3qvu:B (2.5) BS02 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    180109 3qvv:A (2.35) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 21723874
    180110 3qvv:A (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    180111 3qvv:B (2.35) BS01 A3P 2.8.2.1 GO:0004062 ... P50225 21723874
    180112 3qvv:B (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    180113 3qvw:A (2.0) BS01 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180114 3qvw:A (2.0) BS02 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180115 3qvx:A (1.9) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180116 3qvx:A (1.9) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180117 3qvy:A (2.3) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180118 3qvy:A (2.3) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180119 3qvy:A (2.3) BS03 ZN N/A GO:0005506 ... N/A 21648390
    180120 3qvy:A (2.3) BS04 ZN N/A GO:0005506 ... N/A 21648390
    180121 3qvy:B (2.3) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180122 3qvy:B (2.3) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180123 3qvy:B (2.3) BS03 ME7 N/A GO:0005506 ... N/A 21648390
    180124 3qvy:C (2.3) BS01 ME7 N/A GO:0005506 ... N/A 21648390
    180125 3qvy:C (2.3) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180126 3qvy:C (2.3) BS03 HEM N/A GO:0005506 ... N/A 21648390
    180127 3qvy:C (2.3) BS04 ZN N/A GO:0005506 ... N/A 21648390
    180128 3qvy:C (2.3) BS05 ZN N/A GO:0005506 ... N/A 21648390
    180129 3qvy:D (2.3) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180130 3qvy:D (2.3) BS02 ME7 N/A GO:0005506 ... N/A 21648390
    180131 3qvy:D (2.3) BS03 HEM N/A GO:0005506 ... N/A 21648390
    180132 3qvz:A (2.64) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180133 3qvz:A (2.64) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180134 3qvz:A (2.64) BS03 CU N/A GO:0005506 ... N/A 21648390
    180135 3qvz:A (2.64) BS04 ZN N/A GO:0005506 ... N/A 21648390
    180136 3qvz:B (2.64) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180137 3qvz:B (2.64) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180138 3qvz:C (2.64) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180139 3qvz:C (2.64) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180140 3qvz:C (2.64) BS03 CU N/A GO:0005506 ... N/A 21648390
    180141 3qvz:D (2.64) BS01 ME7 N/A GO:0005506 ... N/A 21648390
    180142 3qvz:D (2.64) BS02 ZN N/A GO:0005506 ... N/A 21648390
    180143 3qvz:D (2.64) BS03 HEM N/A GO:0005506 ... N/A 21648390
    180144 3qw0:A (1.84) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180145 3qw0:A (1.84) BS02 ME9 N/A GO:0005506 ... N/A 21648390
    180146 3qw0:A (1.84) BS03 ZN N/A GO:0005506 ... N/A 21648390
    180147 3qw0:B (1.84) BS01 HEM N/A GO:0005506 ... N/A 21648390
    180148 3qw0:B (1.84) BS02 ME9 N/A GO:0005506 ... N/A 21648390
    180149 3qw0:B (1.84) BS03 ZN N/A GO:0005506 ... N/A 21648390
    180150 3qw0:C (1.84) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180151 3qw0:C (1.84) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180152 3qw0:D (1.84) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180153 3qw0:D (1.84) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180154 3qw1:A (2.7) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180155 3qw1:A (2.7) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180156 3qw1:B (2.7) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180157 3qw1:B (2.7) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180158 3qw1:C (2.7) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180159 3qw1:C (2.7) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180160 3qw1:C (2.7) BS03 LCY N/A GO:0005506 ... N/A 21648390
    180161 3qw1:D (2.7) BS01 ZN N/A GO:0005506 ... N/A 21648390
    180162 3qw1:D (2.7) BS02 HEM N/A GO:0005506 ... N/A 21648390
    180163 3qw1:D (2.7) BS03 ZN N/A GO:0005506 ... N/A 21648390
    180164 3qw2:A (2.59) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180165 3qw2:A (2.59) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180166 3qw2:B (2.59) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180167 3qw2:B (2.59) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180168 3qw2:C (2.59) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180169 3qw2:C (2.59) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180170 3qw2:D (2.59) BS01 PO4 5.5.1.4 GO:0004512 ... O28480 22261071
    180171 3qw2:D (2.59) BS02 NAD 5.5.1.4 GO:0004512 ... O28480 22261071
    180172 3qw4:B (3.0) BS01 U5P 4.1.1.23 GO:0004588 ... H9ABT8 21507942
    180173 3qw4:B (3.0) BS02 U5P 4.1.1.23 GO:0004588 ... H9ABT8 21507942
    180174 3qw4:C (3.0) BS01 U5P 4.1.1.23 GO:0004588 ... H9ABT8 21507942
    180175 3qw4:C (3.0) BS02 U5P 4.1.1.23 GO:0004588 ... H9ABT8 21507942
    180176 3qw4:C (3.0) BS03 U5P 4.1.1.23 GO:0004588 ... H9ABT8 21507942
    180177 3qw5:A (1.6) BS01 peptide 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180178 3qw5:A (1.6) BS02 ZN 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180179 3qw6:A (1.6) BS01 peptide 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180180 3qw6:A (1.6) BS02 ZN 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180181 3qw7:A (1.5) BS01 peptide 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180182 3qw7:A (1.5) BS02 ZN 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180183 3qw8:A (1.6) BS01 peptide 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180184 3qw8:A (1.6) BS02 ZN 3.4.24.69 GO:0004222 ... P0DPI1 22525749
    180185 3qw9:A (2.0) BS01 MAN ? N/A P26342 21402931
    180186 3qwb:A (1.59) BS01 NDP 1.6.5.5 GO:0003960 ... P38230 21820057
    180187 3qwb:B (1.59) BS01 NDP 1.6.5.5 GO:0003960 ... P38230 21820057
    180188 3qwb:C (1.59) BS01 NDP 1.6.5.5 GO:0003960 ... P38230 21820057
    180189 3qwb:D (1.59) BS01 NDP 1.6.5.5 GO:0003960 ... P38230 21820057
    180190 3qwc:H (1.75) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    180191 3qwc:H (1.75) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 22366545
    180192 3qwc:H (1.75) BS03 98P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=55.4uM
    180193 3qwf:A (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180194 3qwf:B (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180195 3qwf:C (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180196 3qwf:D (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180197 3qwf:E (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180198 3qwf:F (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180199 3qwf:G (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506
    180200 3qwf:H (1.88) BS01 NAP 1.1.1.62 GO:0016614 ... O93874 21929506

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).