SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    181201 3ra9:A (2.7) BS01 dna ? GO:0005198 ... Q8JQF8 21900159
    181202 3raa:A (3.2) BS01 A ? GO:0005198 ... Q8JQF8 21900159
    181203 3rab:A (2.0) BS01 MG ? GO:0003924 ... P63012 10196122
    181204 3rab:A (2.0) BS02 GNP ? GO:0003924 ... P63012 10196122
    181205 3rad:A (3.35) BS01 dna 5.6.2.2 GO:0003677 ... P72525 27655731
    181206 3rad:A (3.35) BS02 dna 5.6.2.2 GO:0003677 ... P72525 27655731
    181207 3rad:A (3.35) BS03 MG 5.6.2.2 GO:0003677 ... P72525 27655731
    181208 3rad:B (3.35) BS01 dna 5.6.2.2 GO:0003677 ... P72525 27655731
    181209 3rad:B (3.35) BS02 dna 5.6.2.2 GO:0003677 ... P72525 27655731
    181210 3rad:B (3.35) BS03 MG 5.6.2.2 GO:0003677 ... P72525 27655731
    181211 3rad:C (3.35) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181212 3rad:C (3.35) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181213 3rad:C (3.35) BS03 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181214 3rad:C (3.35) BS04 MG 5.6.2.2 GO:0003677 ... Q59961 27655731
    181215 3rad:D (3.35) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181216 3rad:D (3.35) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181217 3rad:D (3.35) BS03 dna 5.6.2.2 GO:0003677 ... Q59961 27655731
    181218 3rad:D (3.35) BS04 MG 5.6.2.2 GO:0003677 ... Q59961 27655731
    181219 3rae:A (2.9) BS01 dna 5.6.2.2 GO:0003677 ... P72525 27050128
    181220 3rae:A (2.9) BS02 dna 5.6.2.2 GO:0003677 ... P72525 27050128
    181221 3rae:A (2.9) BS03 MG 5.6.2.2 GO:0003677 ... P72525 27050128
    181222 3rae:B (2.9) BS01 dna 5.6.2.2 GO:0003677 ... P72525 27050128
    181223 3rae:B (2.9) BS02 dna 5.6.2.2 GO:0003677 ... P72525 27050128
    181224 3rae:B (2.9) BS03 MG 5.6.2.2 GO:0003677 ... P72525 27050128
    181225 3rae:C (2.9) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181226 3rae:C (2.9) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181227 3rae:C (2.9) BS03 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181228 3rae:C (2.9) BS04 MG 5.6.2.2 GO:0003677 ... Q59961 27050128
    181229 3rae:D (2.9) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181230 3rae:D (2.9) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181231 3rae:D (2.9) BS03 dna 5.6.2.2 GO:0003677 ... Q59961 27050128
    181232 3rae:D (2.9) BS04 MG 5.6.2.2 GO:0003677 ... Q59961 27050128
    181233 3raf:A (3.24) BS01 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    181234 3raf:A (3.24) BS02 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    181235 3raf:A (3.24) BS03 MG 5.6.2.2 GO:0003677 ... P72525 N/A
    181236 3raf:B (3.24) BS01 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    181237 3raf:B (3.24) BS02 dna 5.6.2.2 GO:0003677 ... P72525 N/A
    181238 3raf:B (3.24) BS03 MG 5.6.2.2 GO:0003677 ... P72525 N/A
    181239 3raf:C (3.24) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 N/A
    181240 3raf:C (3.24) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 N/A
    181241 3raf:C (3.24) BS03 dna 5.6.2.2 GO:0003677 ... Q59961 N/A
    181242 3raf:C (3.24) BS04 MG 5.6.2.2 GO:0003677 ... Q59961 N/A
    181243 3raf:C (3.24) BS05 PDQ 5.6.2.2 GO:0003677 ... Q59961 N/A
    181244 3raf:D (3.24) BS01 dna 5.6.2.2 GO:0003677 ... Q59961 N/A
    181245 3raf:D (3.24) BS02 dna 5.6.2.2 GO:0003677 ... Q59961 N/A
    181246 3raf:D (3.24) BS03 MG 5.6.2.2 GO:0003677 ... Q59961 N/A
    181247 3raf:D (3.24) BS04 PDQ 5.6.2.2 GO:0003677 ... Q59961 N/A
    181248 3rah:A (1.75) BS01 O1Z 2.7.11.22 GO:0000082 ... P24941 23600925
    181249 3rai:A (1.7) BS01 X85 2.7.11.22 GO:0000082 ... P24941 N/A
    181250 3rak:A (1.75) BS01 03Z 2.7.11.22 GO:0000082 ... P24941 23600925
    181251 3ral:A (1.75) BS01 04Z 2.7.11.22 GO:0000082 ... P24941 23600925
    181252 3ram:A (2.7) BS01 ZN ? GO:0016787 ... N/A 21622555
    181253 3ram:A (2.7) BS02 ZN ? GO:0016787 ... N/A 21622555
    181254 3ram:B (2.7) BS01 ZN ? GO:0016787 ... N/A 21622555
    181255 3ram:B (2.7) BS02 ZN ? GO:0016787 ... N/A 21622555
    181256 3ram:C (2.7) BS01 ZN ? GO:0016787 ... N/A 21622555
    181257 3ram:C (2.7) BS02 ZN ? GO:0016787 ... N/A 21622555
    181258 3ram:D (2.7) BS01 ZN ? GO:0016787 ... N/A 21622555
    181259 3ram:D (2.7) BS02 ZN ? GO:0016787 ... N/A 21622555
    181260 3ran:A (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    181261 3ran:B (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    181262 3ran:C (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    181263 3ran:D (2.15) BS01 GDP 3.6.5.- GO:0000054 ... P62825 9878368
    181264 3rap:R (2.2) BS01 MG 3.6.5.2 GO:0000287 ... P10114 10591105
    181265 3rap:R (2.2) BS02 GTP 3.6.5.2 GO:0000287 ... P10114 10591105
    181266 3rap:S (2.2) BS01 MG 3.6.5.2 GO:0000287 ... P10114 10591105
    181267 3rap:S (2.2) BS02 GTP 3.6.5.2 GO:0000287 ... P10114 10591105
    181268 3raq:A (2.25) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181269 3raq:A (2.25) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181270 3raq:A (2.25) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181271 3raq:A (2.25) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181272 3raq:A (2.25) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181273 3raq:A (2.25) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181274 3raq:B (2.25) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181275 3raq:B (2.25) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181276 3raq:B (2.25) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181277 3raq:B (2.25) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181278 3raq:B (2.25) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181279 3raq:B (2.25) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181280 3rar:A (2.19) BS01 IAN 3.1.1.3 GO:0004806 ... P20261 N/A
    181281 3ras:A (2.55) BS01 NDP 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181282 3ras:A (2.55) BS02 FM5 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181283 3ras:A (2.55) BS03 DCV 1.1.1.267 GO:0000287 ... P9WNS1 21561155 BindingDB: Ki=1500nM, Kd=360nM
    181284 3ras:A (2.55) BS04 MN 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181285 3ras:B (2.55) BS01 NDP 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181286 3ras:B (2.55) BS02 FM5 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181287 3ras:B (2.55) BS03 DCV 1.1.1.267 GO:0000287 ... P9WNS1 21561155 BindingDB: Ki=1500nM, Kd=360nM
    181288 3ras:B (2.55) BS04 MN 1.1.1.267 GO:0000287 ... P9WNS1 21561155
    181289 3rav:A (1.9) BS01 RAV ? GO:0005506 ... P02791 N/A
    181290 3raw:A (2.09) BS01 3RA 2.7.12.1 GO:0004672 ... P49761 N/A
    181291 3raw:B (2.09) BS01 3RA 2.7.12.1 GO:0004672 ... P49761 N/A
    181292 3rax:A (1.891) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181293 3rax:A (1.891) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181294 3rax:A (1.891) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181295 3rax:A (1.891) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181296 3rax:A (1.891) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181297 3rax:A (1.891) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181298 3rax:B (1.891) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181299 3rax:B (1.891) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181300 3rax:B (1.891) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181301 3rax:B (1.891) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181302 3rax:B (1.891) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181303 3rax:B (1.891) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181304 3ray:A (1.73) BS01 ZN 2.1.1.- N/A Q9NQV5 N/A
    181305 3rb0:A (3.225) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181306 3rb0:A (3.225) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181307 3rb0:A (3.225) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181308 3rb0:A (3.225) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181309 3rb0:A (3.225) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181310 3rb0:A (3.225) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181311 3rb0:B (3.225) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181312 3rb0:B (3.225) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181313 3rb0:B (3.225) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181314 3rb0:B (3.225) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181315 3rb0:B (3.225) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181316 3rb0:B (3.225) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181317 3rb3:A (2.8) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181318 3rb3:A (2.8) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181319 3rb3:A (2.8) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181320 3rb3:A (2.8) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181321 3rb3:A (2.8) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181322 3rb3:A (2.8) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181323 3rb4:A (2.805) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181324 3rb4:A (2.805) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181325 3rb4:A (2.805) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181326 3rb4:A (2.805) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181327 3rb4:A (2.805) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181328 3rb4:A (2.805) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181329 3rb4:B (2.805) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181330 3rb4:B (2.805) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181331 3rb4:B (2.805) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181332 3rb4:B (2.805) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181333 3rb4:B (2.805) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181334 3rb4:B (2.805) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181335 3rb5:A (2.35) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181336 3rb5:A (2.35) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181337 3rb5:A (2.35) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181338 3rb5:A (2.35) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181339 3rb5:B (2.35) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181340 3rb5:B (2.35) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181341 3rb5:B (2.35) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181342 3rb5:B (2.35) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181343 3rb6:A (2.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181344 3rb6:A (2.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181345 3rb6:A (2.7) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181346 3rb6:A (2.7) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181347 3rb6:A (2.7) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181348 3rb6:A (2.7) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181349 3rb6:B (2.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181350 3rb6:B (2.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181351 3rb6:B (2.7) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181352 3rb6:B (2.7) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181353 3rb6:B (2.7) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181354 3rb6:B (2.7) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181355 3rb7:A (2.9) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181356 3rb7:A (2.9) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181357 3rb7:A (2.9) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181358 3rb7:A (2.9) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181359 3rb7:B (2.9) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181360 3rb7:B (2.9) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181361 3rb7:B (2.9) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181362 3rb7:B (2.9) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181363 3rb7:E (2.9) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181364 3rb7:E (2.9) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181365 3rb7:E (2.9) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181366 3rb7:E (2.9) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181367 3rb7:G (2.9) BS01 CA ? GO:0007154 ... Q9VDG5 22000518
    181368 3rb7:G (2.9) BS02 CA ? GO:0007154 ... Q9VDG5 22000518
    181369 3rb7:G (2.9) BS03 CA ? GO:0007154 ... Q9VDG5 22000518
    181370 3rb7:G (2.9) BS04 CA ? GO:0007154 ... Q9VDG5 22000518
    181371 3rb8:A (2.6) BS01 GDP 3.6.5.- GO:0000166 ... B3FK34 22726436
    181372 3rba:A (1.59) BS01 COD 2.7.7.3 GO:0003824 ... P9WPA5 N/A
    181373 3rbc:A (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181374 3rbc:A (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181375 3rbc:B (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181376 3rbc:B (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181377 3rbc:C (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181378 3rbc:C (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181379 3rbc:D (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181380 3rbc:D (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181381 3rbc:E (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181382 3rbc:E (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181383 3rbc:F (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181384 3rbc:F (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181385 3rbc:G (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181386 3rbc:G (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181387 3rbc:H (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181388 3rbc:H (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181389 3rbc:I (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181390 3rbc:I (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181391 3rbc:J (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181392 3rbc:J (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181393 3rbc:K (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181394 3rbc:K (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181395 3rbc:L (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181396 3rbc:L (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181397 3rbc:M (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181398 3rbc:M (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181399 3rbc:N (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181400 3rbc:N (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).