SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    181401 3rbc:O (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181402 3rbc:O (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181403 3rbc:P (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181404 3rbc:P (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181405 3rbc:Q (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181406 3rbc:Q (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181407 3rbc:R (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181408 3rbc:R (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181409 3rbc:S (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181410 3rbc:S (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181411 3rbc:T (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181412 3rbc:T (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181413 3rbc:U (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181414 3rbc:U (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181415 3rbc:V (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181416 3rbc:V (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181417 3rbc:W (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181418 3rbc:W (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181419 3rbc:X (2.7) BS01 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181420 3rbc:X (2.7) BS02 FE 1.16.3.1 GO:0004322 ... P07798 22424302
    181421 3rbd:A (2.502) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181422 3rbd:A (2.502) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181423 3rbd:A (2.502) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181424 3rbd:A (2.502) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181425 3rbd:A (2.502) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181426 3rbd:A (2.502) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181427 3rbd:B (2.502) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181428 3rbd:B (2.502) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181429 3rbd:B (2.502) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181430 3rbd:B (2.502) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181431 3rbd:B (2.502) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181432 3rbd:B (2.502) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181433 3rbe:A (2.8) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181434 3rbe:A (2.8) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181435 3rbe:A (2.8) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181436 3rbe:A (2.8) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181437 3rbe:A (2.8) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181438 3rbe:A (2.8) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181439 3rbe:B (2.8) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181440 3rbe:B (2.8) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181441 3rbe:B (2.8) BS03 DGT 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181442 3rbe:B (2.8) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181443 3rbe:B (2.8) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181444 3rbe:B (2.8) BS06 CA 2.7.7.7 GO:0000287 ... Q97W02 21645853
    181445 3rbf:A (2.9) BS01 PLP 4.1.1.28 GO:0004058 ... P20711 22143761
    181446 3rbh:A (2.301) BS01 CA ? GO:0009279 ... P18895 21778407
    181447 3rbh:A (2.301) BS02 C8E ? GO:0009279 ... P18895 21778407
    181448 3rbh:A (2.301) BS03 C8E ? GO:0009279 ... P18895 21778407
    181449 3rbh:B (2.301) BS01 CA ? GO:0009279 ... P18895 21778407
    181450 3rbh:B (2.301) BS02 C8E ? GO:0009279 ... P18895 21778407
    181451 3rbh:B (2.301) BS03 C8E ? GO:0009279 ... P18895 21778407
    181452 3rbh:B (2.301) BS04 C8E ? GO:0009279 ... P18895 21778407
    181453 3rbh:B (2.301) BS05 C8E ? GO:0009279 ... P18895 21778407
    181454 3rbh:C (2.301) BS01 C8E ? GO:0009279 ... P18895 21778407
    181455 3rbh:C (2.301) BS02 CA ? GO:0009279 ... P18895 21778407
    181456 3rbh:C (2.301) BS03 C8E ? GO:0009279 ... P18895 21778407
    181457 3rbh:C (2.301) BS04 C8E ? GO:0009279 ... P18895 21778407
    181458 3rbh:D (2.301) BS01 C8E ? GO:0009279 ... P18895 21778407
    181459 3rbh:D (2.301) BS02 CA ? GO:0009279 ... P18895 21778407
    181460 3rbh:D (2.301) BS03 C8E ? GO:0009279 ... P18895 21778407
    181461 3rbh:D (2.301) BS04 C8E ? GO:0009279 ... P18895 21778407
    181462 3rbh:D (2.301) BS05 C8E ? GO:0009279 ... P18895 21778407
    181463 3rbh:D (2.301) BS06 C8E ? GO:0009279 ... P18895 21778407
    181464 3rbh:D (2.301) BS07 C8E ? GO:0009279 ... P18895 21778407
    181465 3rbh:D (2.301) BS08 C8E ? GO:0009279 ... P18895 21778407
    181466 3rbh:D (2.301) BS09 C8E ? GO:0009279 ... P18895 21778407
    181467 3rbh:D (2.301) BS10 C8E ? GO:0009279 ... P18895 21778407
    181468 3rbm:A (2.61) BS01 MG ? GO:0004161 ... A5K4U6 22392982
    181469 3rbm:A (2.61) BS02 MG ? GO:0004161 ... A5K4U6 22392982
    181470 3rbm:A (2.61) BS03 B73 ? GO:0004161 ... A5K4U6 22392982
    181471 3rbm:A (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982
    181472 3rbm:B (2.61) BS01 B73 ? GO:0004161 ... A5K4U6 22392982
    181473 3rbm:B (2.61) BS02 MG ? GO:0004161 ... A5K4U6 22392982
    181474 3rbm:B (2.61) BS03 MG ? GO:0004161 ... A5K4U6 22392982
    181475 3rbm:B (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982
    181476 3rbm:C (2.61) BS01 MG ? GO:0004161 ... A5K4U6 22392982
    181477 3rbm:C (2.61) BS02 MG ? GO:0004161 ... A5K4U6 22392982
    181478 3rbm:C (2.61) BS03 MG ? GO:0004161 ... A5K4U6 22392982
    181479 3rbm:C (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982
    181480 3rbm:C (2.61) BS05 B73 ? GO:0004161 ... A5K4U6 22392982
    181481 3rbm:D (2.61) BS01 B73 ? GO:0004161 ... A5K4U6 22392982
    181482 3rbm:D (2.61) BS02 MG ? GO:0004161 ... A5K4U6 22392982
    181483 3rbm:D (2.61) BS03 MG ? GO:0004161 ... A5K4U6 22392982
    181484 3rbm:D (2.61) BS04 B73 ? GO:0004161 ... A5K4U6 22392982
    181485 3rbq:A (2.0) BS01 peptide ? N/A Q13432 21642972
    181486 3rbq:B (2.0) BS01 peptide ? N/A Q13432 21642972
    181487 3rbq:C (2.0) BS01 peptide ? N/A Q13432 21642972
    181488 3rbq:D (2.0) BS01 peptide ? N/A Q13432 21642972
    181489 3rbq:E (2.0) BS01 peptide ? N/A Q13432 21642972
    181490 3rbq:F (2.0) BS01 peptide ? N/A Q13432 21642972
    181491 3rbu:A (1.6) BS01 ZN 3.4.17.21 GO:0004180 ... Q04609 22178733
    181492 3rbu:A (1.6) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 22178733
    181493 3rbu:A (1.6) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 22178733
    181494 3rbu:A (1.6) BS04 G88 3.4.17.21 GO:0004180 ... Q04609 22178733 MOAD: Ki=370pM
    BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM, EC50=0.620000nM
    181495 3rbv:A (1.9) BS01 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181496 3rbv:A (1.9) BS02 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181497 3rbx:A (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181498 3rbx:A (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181499 3rbx:B (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181500 3rbx:B (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181501 3rbx:C (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181502 3rbx:C (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181503 3rbx:D (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181504 3rbx:D (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181505 3rbx:E (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181506 3rbx:E (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181507 3rbx:F (2.8) BS01 CA ? GO:0006813 ... O27564 N/A
    181508 3rbx:F (2.8) BS02 CA ? GO:0006813 ... O27564 N/A
    181509 3rbz:A (3.4) BS01 CA ? GO:0005886 ... O27564 N/A
    181510 3rbz:A (3.4) BS02 CA ? GO:0005886 ... O27564 N/A
    181511 3rbz:B (3.4) BS01 CA ? GO:0005886 ... O27564 N/A
    181512 3rbz:B (3.4) BS02 CA ? GO:0005886 ... O27564 N/A
    181513 3rbz:C (3.4) BS01 CA ? GO:0005886 ... O27564 N/A
    181514 3rbz:C (3.4) BS02 CA ? GO:0005886 ... O27564 N/A
    181515 3rbz:D (3.4) BS01 CA ? GO:0005886 ... O27564 N/A
    181516 3rbz:D (3.4) BS02 CA ? GO:0005886 ... O27564 N/A
    181517 3rc0:A (2.19) BS01 peptide 2.1.1.- GO:0005515 ... Q8TBK2 21515635
    181518 3rc0:A (2.19) BS02 SAM 2.1.1.- GO:0005515 ... Q8TBK2 21515635
    181519 3rc0:B (2.19) BS01 peptide 2.1.1.- GO:0005515 ... Q8TBK2 21515635
    181520 3rc0:B (2.19) BS02 SAM 2.1.1.- GO:0005515 ... Q8TBK2 21515635
    181521 3rc1:A (1.71) BS01 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181522 3rc1:A (1.71) BS02 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181523 3rc1:A (1.71) BS03 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181524 3rc2:A (1.8) BS01 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181525 3rc2:A (1.8) BS02 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181526 3rc2:A (1.8) BS03 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181527 3rc3:A (2.08) BS01 ANP 3.6.4.13 GO:0003724 ... Q8IYB8 22101826
    181528 3rc4:A (1.5) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 21507982
    181529 3rc4:A (1.5) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 21507982
    181530 3rc5:A (1.6) BS01 peptide 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 21507982
    181531 3rc5:A (1.6) BS02 ZN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0006508 ... P26664 21507982
    181532 3rc6:A (1.3) BS01 ZN 3.4.21.98
    3.6.1.15
    3.6.4.13
    GO:0006508 ... A8DG50 21507982
    181533 3rc7:A (2.0) BS01 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181534 3rc7:A (2.0) BS02 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181535 3rc7:A (2.0) BS03 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181536 3rc8:A (2.9) BS01 rna 3.6.4.13 GO:0003724 ... Q8IYB8 22101826
    181537 3rc9:A (1.91) BS01 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181538 3rc9:A (1.91) BS02 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181539 3rc9:A (1.91) BS03 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181540 3rc9:A (1.91) BS04 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181541 3rcb:A (2.49) BS01 NAP 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181542 3rcb:A (2.49) BS02 PO4 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181543 3rcb:A (2.49) BS03 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181544 3rcb:A (2.49) BS04 TLO 1.1.1.384 GO:0000166 ... B3TMR8 21598943
    181545 3rcc:A (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181546 3rcc:A (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181547 3rcc:A (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181548 3rcc:B (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181549 3rcc:B (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181550 3rcc:C (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181551 3rcc:C (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181552 3rcc:D (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181553 3rcc:D (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181554 3rcc:E (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181555 3rcc:E (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181556 3rcc:F (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181557 3rcc:F (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181558 3rcc:G (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181559 3rcc:G (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181560 3rcc:G (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181561 3rcc:H (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181562 3rcc:H (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181563 3rcc:H (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181564 3rcc:I (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181565 3rcc:I (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181566 3rcc:J (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181567 3rcc:J (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181568 3rcc:K (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181569 3rcc:K (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181570 3rcc:L (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181571 3rcc:L (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181572 3rcc:M (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181573 3rcc:M (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181574 3rcc:N (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181575 3rcc:N (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181576 3rcc:N (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181577 3rcc:O (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181578 3rcc:O (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181579 3rcc:P (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181580 3rcc:P (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181581 3rcc:P (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181582 3rcc:Q (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181583 3rcc:Q (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181584 3rcc:Q (3.1) BS03 ZN ? N/A Q8DZY1 21912586
    181585 3rcc:R (3.1) BS01 ZN ? N/A Q8DZY1 21912586
    181586 3rcc:R (3.1) BS02 ZN ? N/A Q8DZY1 21912586
    181587 3rcd:A (3.21) BS01 03P 2.7.10.1 GO:0004672 ... P04626 22003817 BindingDB: IC50=17nM
    181588 3rcd:C (3.21) BS01 03P 2.7.10.1 GO:0004672 ... P04626 22003817 BindingDB: IC50=17nM
    181589 3rce:A (3.4) BS01 peptide 2.4.99.19 GO:0000287 ... B9KDD4 21677752
    181590 3rce:A (3.4) BS02 MG 2.4.99.19 GO:0000287 ... B9KDD4 21677752
    181591 3rce:A (3.4) BS03 MG 2.4.99.19 GO:0000287 ... B9KDD4 21677752
    181592 3rcf:A (1.15) BS01 BS4 5.2.1.8 GO:0000413 ... P30405 27652979
    181593 3rcf:A (1.15) BS02 BS4 5.2.1.8 GO:0000413 ... P30405 27652979
    181594 3rch:B (2.8) BS01 PLP 4.1.1.28 GO:0004058 ... P20711 22143761
    181595 3rci:X (1.44) BS01 M3I 5.2.1.8 GO:0000413 ... P30405 27652979
    181596 3rci:X (1.44) BS02 M3I 5.2.1.8 GO:0000413 ... P30405 27652979
    181597 3rci:X (1.44) BS03 M3I 5.2.1.8 GO:0000413 ... P30405 27652979
    181598 3rci:X (1.44) BS04 M3I 5.2.1.8 GO:0000413 ... P30405 27652979
    181599 3rcj:A (1.7) BS01 3RC 2.7.11.1 GO:0004672 ... O15530 21625704 MOAD: ic50=0.8uM
    181600 3rck:X (1.26) BS01 1FP 5.2.1.8 GO:0000413 ... P30405 27652979

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).