SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    187001 3sxn:B (2.03) BS01 COA ? GO:0008080 ... A0QY29 22547814
    187002 3sxn:C (2.03) BS01 COA ? GO:0008080 ... A0QY29 22547814
    187003 3sxn:D (2.03) BS01 COA ? GO:0008080 ... A0QY29 22547814
    187004 3sxn:E (2.03) BS01 COA ? GO:0008080 ... A0QY29 22547814
    187005 3sxn:F (2.03) BS01 COA ? GO:0008080 ... A0QY29 22547814
    187006 3sxp:A (2.55) BS01 NAD 5.1.3.20 GO:0005975 ... B5Z7L9 21979583
    187007 3sxp:B (2.55) BS01 NAD 5.1.3.20 GO:0005975 ... B5Z7L9 21979583
    187008 3sxp:C (2.55) BS01 NAD 5.1.3.20 GO:0005975 ... B5Z7L9 21979583
    187009 3sxp:D (2.55) BS01 NAD 5.1.3.20 GO:0005975 ... B5Z7L9 21979583
    187010 3sxp:E (2.55) BS01 NAD 5.1.3.20 GO:0005975 ... B5Z7L9 21979583
    187011 3sxq:A (1.9) BS01 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187012 3sxq:A (1.9) BS02 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187013 3sxq:A (1.9) BS03 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187014 3sxq:A (1.9) BS04 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187015 3sxq:A (1.9) BS05 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187016 3sxq:A (1.9) BS06 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187017 3sxq:A (1.9) BS07 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187018 3sxq:A (1.9) BS08 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187019 3sxq:A (1.9) BS09 CA 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187020 3sxq:A (1.9) BS10 CO 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187021 3sxq:B (1.9) BS01 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187022 3sxq:B (1.9) BS02 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187023 3sxq:B (1.9) BS03 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187024 3sxq:B (1.9) BS04 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187025 3sxq:B (1.9) BS05 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187026 3sxq:B (1.9) BS06 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187027 3sxq:B (1.9) BS07 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187028 3sxq:B (1.9) BS08 HEC 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187029 3sxq:B (1.9) BS09 CA 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187030 3sxq:B (1.9) BS10 CO 1.7.2.2 GO:0019645 ... E7EDQ7 22935005
    187031 3sxr:A (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P51813 21883956 BindingDB: Kd=1.4nM
    187032 3sxr:B (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P51813 21883956 BindingDB: Kd=1.4nM
    187033 3sxs:A (1.89) BS01 PP2 2.7.10.2 GO:0004672 ... P51813 21883956
    187034 3sxt:A (1.81) BS01 CA 1.-.-.- GO:0004130 ... Q51658 N/A
    187035 3sxt:A (1.81) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 N/A
    187036 3sxt:A (1.81) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 N/A
    187037 3sxt:B (1.81) BS01 CA 1.-.-.- GO:0004130 ... Q51658 N/A
    187038 3sxt:B (1.81) BS02 HEC 1.-.-.- GO:0004130 ... Q51658 N/A
    187039 3sxt:B (1.81) BS03 HEC 1.-.-.- GO:0004130 ... Q51658 N/A
    187040 3sxu:A (1.85) BS01 peptide 2.7.7.7 GO:0003677 ... P28905 21857649
    187041 3sxv:A (2.1) BS01 HEM 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    187042 3sxv:A (2.1) BS02 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    187043 3sxv:A (2.1) BS03 ZN 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    187044 3sxv:A (2.1) BS04 3TR 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    187045 3sxv:A (2.1) BS05 3TR 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    187046 3sxx:A (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187047 3sxx:B (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187048 3sxx:C (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187049 3sxx:D (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187050 3sxx:E (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187051 3sxx:F (1.27) BS01 CO 1.4.3.21 GO:0005507 ... P12807 22691777
    187052 3sy0:A (1.489) BS01 MG N/A N/A N/A 14625588
    187053 3sy0:A (1.489) BS02 ZN N/A N/A N/A 14625588
    187054 3sy4:A (1.91) BS01 FAD 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187055 3sy5:A (1.321) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 N/A BindingDB: Ki=12400nM
    187056 3sy5:A (1.321) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 N/A BindingDB: Ki=12400nM
    187057 3sy5:B (1.321) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 N/A BindingDB: Ki=12400nM
    187058 3sy5:B (1.321) BS02 UP6 4.1.1.23 GO:0004590 ... O26232 N/A BindingDB: Ki=12400nM
    187059 3sy7:A (2.15) BS01 C8E 3.4.21.- GO:0008236 ... P32722 22272184
    187060 3sy7:A (2.15) BS02 C8E 3.4.21.- GO:0008236 ... P32722 22272184
    187061 3sy7:A (2.15) BS03 C8E 3.4.21.- GO:0008236 ... P32722 22272184
    187062 3sy8:A (2.5) BS01 MG 3.1.4.52 GO:0000160 ... Q9HX69 22753070
    187063 3sy8:B (2.5) BS01 MG 3.1.4.52 GO:0000160 ... Q9HX69 22753070
    187064 3sy8:C (2.5) BS01 MG 3.1.4.52 GO:0000160 ... Q9HX69 22753070
    187065 3sy8:D (2.5) BS01 MG 3.1.4.52 GO:0000160 ... Q9HX69 22753070
    187066 3sy9:A (2.8) BS01 C8E ? GO:0015288 ... Q9I6X0 22272184
    187067 3sy9:A (2.8) BS02 C8E ? GO:0015288 ... Q9I6X0 22272184
    187068 3sy9:A (2.8) BS03 C8E ? GO:0015288 ... Q9I6X0 22272184
    187069 3sy9:A (2.8) BS04 C8E ? GO:0015288 ... Q9I6X0 22272184
    187070 3sy9:A (2.8) BS05 C8E ? GO:0015288 ... Q9I6X0 22272184
    187071 3sy9:B (2.8) BS01 C8E ? GO:0015288 ... Q9I6X0 22272184
    187072 3sy9:B (2.8) BS02 C8E ? GO:0015288 ... Q9I6X0 22272184
    187073 3sy9:B (2.8) BS03 C8E ? GO:0015288 ... Q9I6X0 22272184
    187074 3sy9:B (2.8) BS04 C8E ? GO:0015288 ... Q9I6X0 22272184
    187075 3sy9:C (2.8) BS01 C8E ? GO:0015288 ... Q9I6X0 22272184
    187076 3sy9:C (2.8) BS02 C8E ? GO:0015288 ... Q9I6X0 22272184
    187077 3sy9:C (2.8) BS03 C8E ? GO:0015288 ... Q9I6X0 22272184
    187078 3sy9:D (2.8) BS01 C8E ? GO:0015288 ... Q9I6X0 22272184
    187079 3sya:A (2.98) BS01 NA ? GO:0005242 ... P48542 21962516
    187080 3sya:A (2.98) BS02 PIO ? GO:0005242 ... P48542 21962516
    187081 3syb:A (2.7) BS01 C8E ? GO:0015288 ... Q9HVS0 22272184
    187082 3syb:A (2.7) BS02 C8E ? GO:0015288 ... Q9HVS0 22272184
    187083 3syi:A (2.2001) BS01 FAD 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187084 3sym:A (2.4) BS01 GP0 2.4.1.1 GO:0004645 ... P00489 22296957 MOAD: Ki=27.1uM
    187085 3syn:A (3.063) BS01 peptide ? GO:0003924 ... Q01960 22056770
    187086 3syn:A (3.063) BS02 peptide ? GO:0003924 ... Q01960 22056770
    187087 3syn:A (3.063) BS03 GDP ? GO:0003924 ... Q01960 22056770
    187088 3syn:A (3.063) BS04 AF3 ? GO:0003924 ... Q01960 22056770
    187089 3syn:B (3.063) BS01 peptide ? GO:0003924 ... Q01960 22056770
    187090 3syn:B (3.063) BS02 peptide ? GO:0003924 ... Q01960 22056770
    187091 3syn:B (3.063) BS03 GDP ? GO:0003924 ... Q01960 22056770
    187092 3syn:B (3.063) BS04 AF3 ? GO:0003924 ... Q01960 22056770
    187093 3syn:C (3.063) BS01 peptide ? GO:0003924 ... Q01960 22056770
    187094 3syn:C (3.063) BS02 peptide ? GO:0003924 ... Q01960 22056770
    187095 3syn:C (3.063) BS03 GDP ? GO:0003924 ... Q01960 22056770
    187096 3syn:C (3.063) BS04 AF3 ? GO:0003924 ... Q01960 22056770
    187097 3syn:D (3.063) BS01 peptide ? GO:0003924 ... Q01960 22056770
    187098 3syn:D (3.063) BS02 peptide ? GO:0003924 ... Q01960 22056770
    187099 3syn:D (3.063) BS03 GDP ? GO:0003924 ... Q01960 22056770
    187100 3syn:D (3.063) BS04 AF3 ? GO:0003924 ... Q01960 22056770
    187101 3syo:A (3.54) BS01 NA ? GO:0005242 ... P48542 21962516
    187102 3syq:A (3.44) BS01 PIO ? GO:0005242 ... P48542 21962516
    187103 3syr:A (2.4) BS01 GPK 2.4.1.1 GO:0004645 ... P00489 22296957 MOAD: Ki=7.9uM
    BindingDB: Ki=5500nM
    187104 3sys:A (1.65) BS01 C8E ? GO:0015288 ... Q9HUR5 22272184
    187105 3sys:A (1.65) BS02 C8E ? GO:0015288 ... Q9HUR5 22272184
    187106 3sys:A (1.65) BS03 C8E ? GO:0015288 ... Q9HUR5 22272184
    187107 3sys:A (1.65) BS04 C8E ? GO:0015288 ... Q9HUR5 22272184
    187108 3sys:A (1.65) BS05 C8E ? GO:0015288 ... Q9HUR5 22272184
    187109 3sys:A (1.65) BS06 C8E ? GO:0015288 ... Q9HUR5 22272184
    187110 3sys:A (1.65) BS07 C8E ? GO:0015288 ... Q9HUR5 22272184
    187111 3sys:A (1.65) BS08 VNL ? GO:0015288 ... Q9HUR5 22272184
    187112 3sys:A (1.65) BS09 VNL ? GO:0015288 ... Q9HUR5 22272184
    187113 3sys:B (1.65) BS01 C8E ? GO:0015288 ... Q9HUR5 22272184
    187114 3sys:B (1.65) BS02 C8E ? GO:0015288 ... Q9HUR5 22272184
    187115 3sys:B (1.65) BS03 C8E ? GO:0015288 ... Q9HUR5 22272184
    187116 3sys:B (1.65) BS04 C8E ? GO:0015288 ... Q9HUR5 22272184
    187117 3sys:B (1.65) BS05 C8E ? GO:0015288 ... Q9HUR5 22272184
    187118 3sys:B (1.65) BS06 C8E ? GO:0015288 ... Q9HUR5 22272184
    187119 3sys:B (1.65) BS07 C8E ? GO:0015288 ... Q9HUR5 22272184
    187120 3sys:B (1.65) BS08 VNL ? GO:0015288 ... Q9HUR5 22272184
    187121 3sys:B (1.65) BS09 VNL ? GO:0015288 ... Q9HUR5 22272184
    187122 3syt:A (2.6511) BS01 GLU 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187123 3syt:A (2.6511) BS02 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187124 3syt:A (2.6511) BS03 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187125 3syt:A (2.6511) BS04 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187126 3syt:A (2.6511) BS05 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187127 3syt:B (2.6511) BS01 GLU 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187128 3syt:B (2.6511) BS02 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187129 3syt:B (2.6511) BS03 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187130 3syt:B (2.6511) BS04 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187131 3syt:B (2.6511) BS05 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187132 3syt:C (2.6511) BS01 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187133 3syt:C (2.6511) BS02 GLU 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187134 3syt:C (2.6511) BS03 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187135 3syt:C (2.6511) BS04 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187136 3syt:C (2.6511) BS05 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187137 3syt:D (2.6511) BS01 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187138 3syt:D (2.6511) BS02 GLU 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187139 3syt:D (2.6511) BS03 NAD 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187140 3syt:D (2.6511) BS04 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187141 3syt:D (2.6511) BS05 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187142 3syu:A (1.95) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 22505257 MOAD: Kd=50uM
    187143 3syy:A (1.9) BS01 MG ? N/A C1D7P6 21893587
    187144 3syy:A (1.9) BS02 MG ? N/A C1D7P6 21893587
    187145 3syz:A (1.952) BS01 dna 2.7.7.7 GO:0001882 ... P19821 22660438
    187146 3syz:A (1.952) BS02 dna 2.7.7.7 GO:0001882 ... P19821 22660438
    187147 3sz0:A (2.1501) BS01 FAD 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187148 3sz0:A (2.1501) BS02 6SE 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187149 3sz0:A (2.1501) BS03 SE 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187150 3sz1:A (2.3) BS01 KNA ? GO:0003677 ... P37231 22391103
    187151 3sz1:A (2.3) BS02 KNA ? GO:0003677 ... P37231 22391103
    187152 3sz1:B (2.3) BS01 LU2 ? GO:0003677 ... P37231 22391103
    187153 3sz1:B (2.3) BS02 MYR ? GO:0003677 ... P37231 22391103 BindingDB: IC50=21000nM
    187154 3sz2:A (2.15) BS01 dna 2.7.7.7 GO:0001882 ... P19821 22660438
    187155 3sz2:A (2.15) BS02 dna 2.7.7.7 GO:0001882 ... P19821 22660438
    187156 3sz3:A (1.5) BS01 TRP 6.1.1.2 GO:0000166 ... Q9KNV7 N/A
    187157 3sz4:A (2.59) BS01 MG ? N/A C1D7P6 21893587
    187158 3sz4:A (2.59) BS02 D5M ? N/A C1D7P6 21893587
    187159 3sz5:A (2.8) BS01 dna ? N/A C1D7P6 21893587
    187160 3sz5:A (2.8) BS02 MG ? N/A C1D7P6 21893587
    187161 3sz5:A (2.8) BS03 MG ? N/A C1D7P6 21893587
    187162 3sz9:A (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187163 3sz9:B (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187164 3sz9:C (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187165 3sz9:D (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187166 3sz9:E (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187167 3sz9:F (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187168 3sz9:G (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187169 3sz9:H (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038
    187170 3szb:A (1.51) BS01 I1E 1.2.1.5 GO:0004028 ... P30838 22021038
    187171 3szb:B (1.51) BS01 I1E 1.2.1.5 GO:0004028 ... P30838 22021038
    187172 3szc:A (2.2) BS01 FAD 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187173 3szc:A (2.2) BS02 DCQ 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187174 3szd:A (2.311) BS01 C8E ? GO:0015288 ... Q9I6P8 22272184
    187175 3szd:A (2.311) BS02 C8E ? GO:0015288 ... Q9I6P8 22272184
    187176 3szd:B (2.311) BS01 C8E ? GO:0015288 ... Q9I6P8 22272184
    187177 3szd:B (2.311) BS02 C8E ? GO:0015288 ... Q9I6P8 22272184
    187178 3szd:B (2.311) BS03 C8E ? GO:0015288 ... Q9I6P8 22272184
    187179 3szf:A (2.0994) BS01 FAD 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187180 3szf:A (2.0994) BS02 DCQ 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187181 3szf:A (2.0994) BS03 S3H 1.8.5.4 GO:0003955 ... B7JBP8 22542586
    187182 3szg:A (2.25) BS01 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187183 3szg:A (2.25) BS02 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187184 3szg:A (2.25) BS03 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187185 3szg:A (2.25) BS04 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187186 3szg:B (2.25) BS01 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187187 3szg:B (2.25) BS02 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187188 3szg:B (2.25) BS03 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187189 3szg:B (2.25) BS04 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187190 3szg:C (2.25) BS01 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187191 3szg:C (2.25) BS02 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187192 3szg:C (2.25) BS03 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187193 3szg:C (2.25) BS04 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187194 3szg:D (2.25) BS01 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187195 3szg:D (2.25) BS02 DND 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187196 3szg:D (2.25) BS03 AMP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187197 3szg:D (2.25) BS04 POP 6.3.5.1 GO:0003952 ... P9WJJ3 22280445
    187198 3szj:A (1.45) BS01 BTN ? GO:0009374 ... Q12QS6 22493427
    187199 3szj:B (1.45) BS01 BTN ? GO:0009374 ... Q12QS6 22493427
    187200 3szk:A (3.01) BS01 HEM ? GO:0004601 ... P69905 21917915

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).