SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    188401 3taf:A (3.0) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188402 3taf:A (3.0) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188403 3taf:B (3.0) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188404 3taf:B (3.0) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188405 3taf:C (3.0) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188406 3taf:C (3.0) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188407 3taf:D (3.0) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188408 3taf:D (3.0) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188409 3tag:A (2.95) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188410 3tag:A (2.95) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188411 3tag:B (2.95) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188412 3tag:B (2.95) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188413 3tag:C (2.95) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188414 3tag:C (2.95) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188415 3tag:D (2.95) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188416 3tag:D (2.95) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22026756
    188417 3tah:A (1.85) BS01 BGO ? GO:0005525 ... Q5M586 22139154
    188418 3tah:A (1.85) BS02 MG ? GO:0005525 ... Q5M586 22139154
    188419 3tah:B (1.85) BS01 BGO ? GO:0005525 ... Q5M586 22139154
    188420 3taj:A (1.7) BS01 NBO 3.4.21.- GO:0005576 ... P24627 N/A
    188421 3taj:A (1.7) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    188422 3taj:A (1.7) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    188423 3tak:A (1.42) BS01 PYR 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188424 3tak:B (1.42) BS01 PYR 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188425 3tal:A (3.15) BS01 MN 3.1.-.- N/A Q8U1N8 22064858
    188426 3tal:A (3.15) BS02 MN 3.1.-.- N/A Q8U1N8 22064858
    188427 3tal:B (3.15) BS01 MN 3.1.-.- N/A Q8U1N8 22064858
    188428 3tal:B (3.15) BS02 MN 3.1.-.- N/A Q8U1N8 22064858
    188429 3tam:A (2.51) BS01 M06 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P04585 22071300
    188430 3tan:A (1.53) BS01 dna N/A GO:0003676 ... N/A 22006298
    188431 3tan:A (1.53) BS02 dna N/A GO:0003676 ... N/A 22006298
    188432 3tan:A (1.53) BS03 GLC N/A GO:0003676 ... N/A 22006298
    188433 3tan:A (1.53) BS04 FRU N/A GO:0003676 ... N/A 22006298
    188434 3tan:A (1.53) BS05 DCP N/A GO:0003676 ... N/A 22006298
    188435 3tao:A (1.45) BS01 PGH 5.3.1.1 GO:0004807 ... P9WG43 22120738 MOAD: Kd=7.28uM
    188436 3tao:A (1.45) BS02 PGH 5.3.1.1 GO:0004807 ... P9WG43 22120738 MOAD: Kd=7.28uM
    188437 3tap:A (1.655) BS01 dna N/A GO:0003676 ... N/A 22006298
    188438 3tap:A (1.655) BS02 dna N/A GO:0003676 ... N/A 22006298
    188439 3tap:A (1.655) BS03 GLC N/A GO:0003676 ... N/A 22006298
    188440 3tap:A (1.655) BS04 FRU N/A GO:0003676 ... N/A 22006298
    188441 3tap:A (1.655) BS05 GLC N/A GO:0003676 ... N/A 22006298
    188442 3taq:A (1.65) BS01 dna N/A GO:0003676 ... N/A 22006298
    188443 3taq:A (1.65) BS02 dna N/A GO:0003676 ... N/A 22006298
    188444 3taq:A (1.65) BS03 GLC N/A GO:0003676 ... N/A 22006298
    188445 3taq:A (1.65) BS04 FRU N/A GO:0003676 ... N/A 22006298
    188446 3taq:A (1.65) BS05 GLC N/A GO:0003676 ... N/A 22006298
    188447 3taq:A (1.65) BS06 MG N/A GO:0003676 ... N/A 22006298
    188448 3tar:A (1.6) BS01 dna N/A GO:0003676 ... N/A 22006298
    188449 3tar:A (1.6) BS02 dna N/A GO:0003676 ... N/A 22006298
    188450 3tar:A (1.6) BS03 GLC N/A GO:0003676 ... N/A 22006298
    188451 3tar:A (1.6) BS04 FRU N/A GO:0003676 ... N/A 22006298
    188452 3tar:A (1.6) BS05 GLC N/A GO:0003676 ... N/A 22006298
    188453 3tas:A (2.3) BS01 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188454 3tas:A (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188455 3tas:A (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188456 3tas:A (2.3) BS04 ZN 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188457 3tas:A (2.3) BS05 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188458 3tas:A (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188459 3tas:B (2.3) BS01 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188460 3tas:B (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188461 3tas:B (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188462 3tas:B (2.3) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188463 3tas:B (2.3) BS05 ZN 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188464 3tas:B (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188465 3tas:C (2.3) BS01 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188466 3tas:C (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188467 3tas:C (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188468 3tas:C (2.3) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188469 3tas:C (2.3) BS05 ZN 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188470 3tas:C (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188471 3tas:C (2.3) BS07 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188472 3tat:A (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188473 3tat:B (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188474 3tat:C (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188475 3tat:D (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188476 3tat:E (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188477 3tat:F (3.5) BS01 PLP 2.6.1.107
    2.6.1.57
    GO:0003824 ... P04693 10417420
    188478 3tav:A (2.15) BS01 MG 3.4.11.18 GO:0004177 ... B1MGB2 25613812
    188479 3tav:A (2.15) BS02 MG 3.4.11.18 GO:0004177 ... B1MGB2 25613812
    188480 3tav:B (2.15) BS01 MG 3.4.11.18 GO:0004177 ... B1MGB2 25613812
    188481 3tav:B (2.15) BS02 MG 3.4.11.18 GO:0004177 ... B1MGB2 25613812
    188482 3taw:A (1.7) BS01 MG ? N/A A6LGN3 N/A
    188483 3tax:A (1.88) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 22082911
    188484 3tax:A (1.88) BS02 UDP 2.4.1.255 GO:0006493 ... O15294 22082911 BindingDB: IC50=1800nM
    188485 3tax:C (1.88) BS01 peptide 2.4.1.255 GO:0006493 ... O15294 22082911
    188486 3tax:C (1.88) BS02 UDP 2.4.1.255 GO:0006493 ... O15294 22082911 BindingDB: IC50=1800nM
    188487 3tay:A (1.85) BS01 MN0 ? GO:0019028 ... P0C6Y8 23035213 MOAD: Kd=0.42mM
    188488 3tay:B (1.85) BS01 MN0 ? GO:0019028 ... P0C6Y8 23035213 MOAD: Kd=0.42mM
    188489 3taz:A (3.2) BS01 MN 3.1.-.- N/A Q8U1N8 22064858
    188490 3taz:B (3.2) BS01 MN 3.1.-.- N/A Q8U1N8 22064858
    188491 3taz:B (3.2) BS02 DA 3.1.-.- N/A Q8U1N8 22064858
    188492 3tb0:A (2.0) BS01 MN0 ? GO:0019028 ... P12473 23035213
    188493 3tb3:B (2.3) BS01 CA 3.4.19.12 GO:0004843 ... Q9Y5K5 21851340
    188494 3tb4:A (1.35) BS01 CA 3.3.2.1 GO:0008908 ... P0C6D3 22993087
    188495 3tb6:A (2.21) BS01 ARB ? GO:0006355 ... P96711 22281747
    188496 3tb6:B (2.21) BS01 ARB ? GO:0006355 ... P96711 22281747
    188497 3tb9:A (2.53) BS01 CDP 1.17.4.1 GO:0000166 ... P21524 22465672
    188498 3tb9:A (2.53) BS02 ANP 1.17.4.1 GO:0000166 ... P21524 22465672
    188499 3tba:A (2.8) BS01 DGT 1.17.4.1 GO:0000166 ... P21524 22465672
    188500 3tba:A (2.8) BS02 ADP 1.17.4.1 GO:0000166 ... P21524 22465672
    188501 3tbb:A (2.3) BS01 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188502 3tbb:A (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188503 3tbb:A (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188504 3tbb:A (2.3) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188505 3tbb:A (2.3) BS05 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188506 3tbb:A (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188507 3tbb:B (2.3) BS01 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188508 3tbb:B (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188509 3tbb:B (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188510 3tbb:B (2.3) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188511 3tbb:B (2.3) BS05 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188512 3tbb:B (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188513 3tbb:C (2.3) BS01 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188514 3tbb:C (2.3) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188515 3tbb:C (2.3) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188516 3tbb:C (2.3) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188517 3tbb:C (2.3) BS05 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188518 3tbb:C (2.3) BS06 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188519 3tbc:A (2.7) BS01 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188520 3tbc:A (2.7) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188521 3tbc:A (2.7) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188522 3tbc:A (2.7) BS04 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188523 3tbc:A (2.7) BS05 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188524 3tbc:B (2.7) BS01 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188525 3tbc:B (2.7) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188526 3tbc:B (2.7) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188527 3tbc:B (2.7) BS04 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188528 3tbc:C (2.7) BS01 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188529 3tbc:C (2.7) BS02 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188530 3tbc:C (2.7) BS03 CU 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188531 3tbc:C (2.7) BS04 OXY 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188532 3tbc:C (2.7) BS05 I75 1.10.3.2 GO:0005507 ... J9PBR2 24870309
    188533 3tbd:A (1.8) BS01 CA ? N/A Q96CW9 22041449
    188534 3tbe:A (2.85) BS01 ETM 3.4.22.- N/A Q8E0S7 22033482
    188535 3tbe:B (2.85) BS01 ETM 3.4.22.- N/A Q8E0S7 22033482
    188536 3tbe:C (2.85) BS01 ETM 3.4.22.- N/A Q8E0S7 22033482
    188537 3tbe:D (2.85) BS01 ETM 3.4.22.- N/A Q8E0S7 22033482
    188538 3tbe:E (2.85) BS01 ETM 3.4.22.- N/A Q8E0S7 22033482
    188539 3tbg:A (2.1) BS01 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188540 3tbg:A (2.1) BS02 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188541 3tbg:A (2.1) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188542 3tbg:A (2.1) BS04 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188543 3tbg:A (2.1) BS05 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188544 3tbg:B (2.1) BS01 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188545 3tbg:B (2.1) BS02 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188546 3tbg:B (2.1) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188547 3tbg:B (2.1) BS04 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188548 3tbg:C (2.1) BS01 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188549 3tbg:C (2.1) BS02 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188550 3tbg:C (2.1) BS03 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188551 3tbg:C (2.1) BS04 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188552 3tbg:C (2.1) BS05 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188553 3tbg:D (2.1) BS01 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188554 3tbg:D (2.1) BS02 RTZ 1.14.14.- GO:0004497 ... P10635 25555909
    188555 3tbg:D (2.1) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188556 3tbg:D (2.1) BS04 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188557 3tbh:A (1.68) BS01 peptide 2.5.1.47 GO:0004124 ... G1C2I2 N/A
    188558 3tbk:A (2.14) BS01 ANP 3.6.4.13 GO:0003676 ... Q6Q899 21979817
    188559 3tbm:A (1.797) BS01 FES ? GO:0043231 ... Q8XVB9 21949752
    188560 3tbm:B (1.797) BS01 FES ? GO:0043231 ... Q8XVB9 21949752
    188561 3tbn:A (1.15) BS01 FES ? GO:0005737 ... Q2W014 21949752
    188562 3tbn:A (1.15) BS02 FES ? GO:0005737 ... Q2W014 21949752
    188563 3tbo:A (1.5) BS01 FES ? GO:0005737 ... A3MW14 21949752
    188564 3tbs:A (2.49) BS01 peptide ? N/A P01899 N/A
    188565 3tbs:D (2.49) BS01 peptide ? N/A P01899 N/A
    188566 3tbt:A (2.3) BS01 peptide ? N/A P01899 N/A
    188567 3tbt:D (2.3) BS01 peptide ? N/A P01899 N/A
    188568 3tbt:G (2.3) BS01 peptide ? N/A P01899 N/A
    188569 3tbt:J (2.3) BS01 peptide ? N/A P01899 N/A
    188570 3tbv:A (2.1) BS01 peptide ? N/A P01899 N/A
    188571 3tbv:C (2.1) BS01 peptide ? N/A P01899 N/A
    188572 3tbv:E (2.1) BS01 peptide ? N/A P01899 N/A
    188573 3tbv:G (2.1) BS01 peptide ? N/A P01899 N/A
    188574 3tbw:A (2.15) BS01 peptide ? N/A P01899 N/A
    188575 3tbw:C (2.15) BS01 peptide ? N/A P01899 N/A
    188576 3tbw:E (2.15) BS01 peptide ? N/A P01899 N/A
    188577 3tbw:G (2.15) BS01 peptide ? N/A P01899 N/A
    188578 3tby:A (2.5) BS01 peptide ? N/A P01899 N/A
    188579 3tby:D (2.5) BS01 peptide ? N/A P01899 N/A
    188580 3tby:G (2.5) BS01 peptide ? N/A P01899 N/A
    188581 3tby:J (2.5) BS01 peptide ? N/A P01899 N/A
    188582 3tc3:A (1.5) BS01 MN 3.-.-.- GO:0004519 ... Q4J9T1 23221644
    188583 3tc3:B (1.5) BS01 MN 3.-.-.- GO:0004519 ... Q4J9T1 23221644
    188584 3tc5:A (1.4) BS01 3T5 5.2.1.8 GO:0000413 ... Q13526 21797253
    188585 3tc8:A (1.06) BS01 ZN ? GO:0008270 ... A6LHT4 N/A
    188586 3tc8:B (1.06) BS01 ZN ? GO:0008270 ... A6LHT4 N/A
    188587 3tce:A (2.6) BS01 LYZ 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188588 3tce:B (2.6) BS01 LYZ 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188589 3tcf:A (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188590 3tcf:B (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188591 3tcf:C (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188592 3tcf:D (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188593 3tcf:E (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188594 3tcf:F (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188595 3tcf:G (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188596 3tcf:H (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188597 3tcg:A (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188598 3tcg:B (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188599 3tcg:C (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188600 3tcg:D (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).