SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    188601 3tcg:E (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188602 3tcg:F (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188603 3tcg:G (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188604 3tcg:H (2.0) BS01 peptide ? GO:0006857 ... P23843 21983341
    188605 3tcm:A (2.71) BS01 DCS 2.6.1.2 GO:0004021 ... P52894 22750542
    188606 3tcm:B (2.71) BS01 DCS 2.6.1.2 GO:0004021 ... P52894 22750542
    188607 3tcp:A (2.69) BS01 CKJ 2.7.10.1 GO:0004672 ... Q12866 22662287 BindingDB: IC50=2.9nM, Ki=4.3nM
    188608 3tcp:B (2.69) BS01 CKJ 2.7.10.1 GO:0004672 ... Q12866 22662287 BindingDB: IC50=2.9nM, Ki=4.3nM
    188609 3tcp:B (2.69) BS02 CA 2.7.10.1 GO:0004672 ... Q12866 22662287
    188610 3tcs:A (1.88) BS01 MG ? GO:0000287 ... Q161M1 N/A
    188611 3tcs:A (1.88) BS02 MG ? GO:0000287 ... Q161M1 N/A
    188612 3tcs:A (1.88) BS03 DAL ? GO:0000287 ... Q161M1 N/A
    188613 3tcs:B (1.88) BS01 MG ? GO:0000287 ... Q161M1 N/A
    188614 3tcs:B (1.88) BS02 MG ? GO:0000287 ... Q161M1 N/A
    188615 3tcs:B (1.88) BS03 DAL ? GO:0000287 ... Q161M1 N/A
    188616 3tct:A (1.3) BS01 3MI ? GO:0001523 ... P02766 22645360 MOAD: Kd=3nM
    BindingDB: IC50=3100nM, Kd=274nM
    188617 3tct:B (1.3) BS01 3MI ? GO:0001523 ... P02766 22645360 MOAD: Kd=3nM
    BindingDB: IC50=3100nM, Kd=274nM
    188618 3tcx:B (3.6) BS01 MG ? N/A P20701 N/A
    188619 3tcx:D (3.6) BS01 MG ? N/A P20701 N/A
    188620 3tcx:F (3.6) BS01 MG ? N/A P20701 N/A
    188621 3tcx:H (3.6) BS01 MG ? N/A P20701 N/A
    188622 3tcx:J (3.6) BS01 MG ? N/A P20701 N/A
    188623 3tcx:L (3.6) BS01 MG ? N/A P20701 N/A
    188624 3tcx:N (3.6) BS01 MG ? N/A P20701 N/A
    188625 3tcx:P (3.6) BS01 MG ? N/A P20701 N/A
    188626 3tcx:R (3.6) BS01 MG ? N/A P20701 N/A
    188627 3tcx:T (3.6) BS01 MG ? N/A P20701 N/A
    188628 3tcx:V (3.6) BS01 MG ? N/A P20701 N/A
    188629 3tcx:X (3.6) BS01 MG ? N/A P20701 N/A
    188630 3tcx:Z (3.6) BS01 MG ? N/A P20701 N/A
    188631 3tcx:b (3.6) BS01 MG ? N/A P20701 N/A
    188632 3tcy:A (1.55) BS01 PHE 1.14.16.1 GO:0004497 ... P30967 23860686
    188633 3tcy:A (1.55) BS02 CO 1.14.16.1 GO:0004497 ... P30967 23860686
    188634 3tcz:A (2.1) BS01 R2Z 5.2.1.8 GO:0000413 ... Q13526 22670809
    188635 3td3:A (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596
    188636 3td3:B (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596
    188637 3td3:C (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596
    188638 3td3:D (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=0.59uM
    188639 3td3:E (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=0.59uM
    188640 3td3:F (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=0.59uM
    188641 3td3:G (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=0.59uM
    188642 3td3:H (1.59) BS01 GLY ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=0.59uM
    188643 3td4:A (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188644 3td4:B (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188645 3td4:C (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188646 3td4:D (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188647 3td4:E (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188648 3td4:F (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188649 3td4:G (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188650 3td4:H (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    188651 3td5:A (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188652 3td5:B (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188653 3td5:C (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188654 3td5:D (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188655 3td5:E (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188656 3td5:F (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188657 3td5:G (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188658 3td5:H (2.0) BS01 peptide ? GO:0016020 ... Q6RYW5 21965596
    188659 3td7:A (2.21) BS01 FAD 1.8.3.2 GO:0016491 ... Q5UP54 23209798
    188660 3td8:A (1.8) BS01 NDP 1.5.1.3 GO:0003729 ... P16184 22505410
    188661 3td8:A (1.8) BS02 D2R 1.5.1.3 GO:0003729 ... P16184 22505410 MOAD: ic50=1.2nM
    BindingDB: IC50=1.2nM
    188662 3td9:A (1.9) BS01 PHE ? N/A Q9X0L9 N/A
    188663 3tda:A (2.67) BS01 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188664 3tda:A (2.67) BS02 PN0 1.14.14.- GO:0004497 ... P10635 25555909
    188665 3tda:A (2.67) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188666 3tda:A (2.67) BS04 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188667 3tda:B (2.67) BS01 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188668 3tda:B (2.67) BS02 PN0 1.14.14.- GO:0004497 ... P10635 25555909
    188669 3tda:B (2.67) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188670 3tda:C (2.67) BS01 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188671 3tda:C (2.67) BS02 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188672 3tda:C (2.67) BS03 PN0 1.14.14.- GO:0004497 ... P10635 25555909
    188673 3tda:C (2.67) BS04 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188674 3tda:D (2.67) BS01 HEM 1.14.14.- GO:0004497 ... P10635 25555909
    188675 3tda:D (2.67) BS02 PN0 1.14.14.- GO:0004497 ... P10635 25555909
    188676 3tda:D (2.67) BS03 ZN 1.14.14.- GO:0004497 ... P10635 25555909
    188677 3tdb:A (2.267) BS01 3TB 5.2.1.8 GO:0000413 ... Q13526 22670809
    188678 3tdc:A (2.41) BS01 0EU 6.4.1.2 GO:0003989 ... O00763 21944854 MOAD: ic50=5.4nM
    BindingDB: IC50=5.4nM
    188679 3tdd:K (2.7) BS01 BFO 3.4.25.1 GO:0004298 ... P30656 21946808
    188680 3tdd:Y (2.7) BS01 BFO 3.4.25.1 GO:0004298 ... P30656 21946808
    188681 3tdf:A (1.99) BS01 2KT 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188682 3tdf:B (1.99) BS01 2KT 4.3.3.7 GO:0005737 ... D0CFC3 N/A
    188683 3tdh:C (2.3) BS01 AMP ? GO:0004679 ... P12904 22019086 MOAD: Kd=55uM
    188684 3tdi:A (2.3) BS01 peptide ? N/A Q12395 21940857
    188685 3tdi:B (2.3) BS01 peptide ? N/A Q12395 21940857
    188686 3tdj:A (1.95) BS01 GLU ? GO:0015276 ... P19491 21895609
    188687 3tdj:A (1.95) BS02 3TJ ? GO:0015276 ... P19491 21895609
    188688 3tdj:A (1.95) BS03 3TJ ? GO:0015276 ... P19491 21895609
    188689 3tdj:B (1.95) BS01 3TJ ? GO:0015276 ... P19491 21895609
    188690 3tdj:B (1.95) BS02 3TJ ? GO:0015276 ... P19491 21895609
    188691 3tdj:B (1.95) BS03 GLU ? GO:0015276 ... P19491 21895609
    188692 3tdk:A (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188693 3tdk:A (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188694 3tdk:B (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188695 3tdk:B (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188696 3tdk:C (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188697 3tdk:C (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188698 3tdk:D (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188699 3tdk:D (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188700 3tdk:E (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188701 3tdk:E (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188702 3tdk:F (2.8) BS01 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188703 3tdk:F (2.8) BS02 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188704 3tdk:G (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188705 3tdk:G (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188706 3tdk:H (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188707 3tdk:H (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188708 3tdk:I (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188709 3tdk:I (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188710 3tdk:J (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188711 3tdk:J (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188712 3tdk:K (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188713 3tdk:K (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188714 3tdk:L (2.8) BS01 NAD 1.1.1.22 GO:0001702 ... O60701 21984906
    188715 3tdk:L (2.8) BS02 UPG 1.1.1.22 GO:0001702 ... O60701 21984906
    188716 3tdl:A (2.6) BS01 11D ? GO:0003677 ... P02768 21997768
    188717 3tdl:A (2.6) BS02 11D ? GO:0003677 ... P02768 21997768
    188718 3tdm:A (2.4) BS01 PO4 N/A GO:0000105 ... N/A 21978247
    188719 3tdm:B (2.4) BS01 PO4 N/A GO:0000105 ... N/A 21978247
    188720 3tdm:C (2.4) BS01 PO4 N/A GO:0000105 ... N/A 21978247
    188721 3tdm:D (2.4) BS01 PO4 N/A GO:0000105 ... N/A 21978247
    188722 3tdp:A (2.99) BS01 ZN ? GO:0005886 ... Q186B7 22407320
    188723 3tdp:B (2.99) BS01 ZN ? GO:0005886 ... Q186B7 22407320
    188724 3tdp:D (2.99) BS01 ZN ? GO:0005886 ... Q186B7 22407320
    188725 3tdp:E (2.99) BS01 ZN ? GO:0005886 ... Q186B7 22407320
    188726 3tdt:A (2.0) BS01 COA 2.3.1.117 GO:0005737 ... P56220 9671504
    188727 3tdt:A (2.0) BS02 26P 2.3.1.117 GO:0005737 ... P56220 9671504
    188728 3tdu:A (1.5) BS01 peptide ? N/A Q96GG9 21940857
    188729 3tdu:B (1.5) BS01 peptide ? N/A Q96GG9 21940857
    188730 3tdv:A (2.2) BS01 GDP ? N/A P96762 22367198
    188731 3tdv:A (2.2) BS02 MG ? N/A P96762 22367198
    188732 3tdv:A (2.2) BS03 MG ? N/A P96762 22367198
    188733 3tdv:B (2.2) BS01 GDP ? N/A P96762 22367198
    188734 3tdv:B (2.2) BS02 MG ? N/A P96762 22367198
    188735 3tdv:B (2.2) BS03 MG ? N/A P96762 22367198
    188736 3tdw:A (1.7) BS01 GDP ? N/A P96762 22367198
    188737 3tdw:A (1.7) BS02 MG ? N/A P96762 22367198
    188738 3tdw:A (1.7) BS03 MG ? N/A P96762 22367198
    188739 3tdz:A (2.0) BS01 peptide ? N/A Q96GG9 21940857
    188740 3tdz:B (2.0) BS01 peptide ? N/A Q96GG9 21940857
    188741 3te4:A (1.46) BS01 ACO 2.3.1.87 GO:0016747 ... Q94521 22716280
    188742 3te5:C (2.5) BS01 NAI ? GO:0004679 ... P12904 22019086
    188743 3te7:A (1.7) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 21859103
    188744 3te7:A (1.7) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 21859103
    188745 3te7:A (1.7) BS03 TE7 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=59nM
    BindingDB: IC50=3200nM
    188746 3te7:A (1.7) BS04 TE7 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=59nM
    BindingDB: IC50=3200nM
    188747 3te7:B (1.7) BS01 TE7 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=59nM
    BindingDB: IC50=3200nM
    188748 3te7:B (1.7) BS02 TE7 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=59nM
    BindingDB: IC50=3200nM
    188749 3te7:B (1.7) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 21859103
    188750 3te7:B (1.7) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 21859103
    188751 3te9:A (1.8) BS01 F6R 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    188752 3te9:B (1.8) BS01 PO4 2.2.1.2 GO:0004801 ... Q5NFX0 24531488
    188753 3tea:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=9nM
    188754 3tea:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=9nM
    188755 3tea:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756
    188756 3tea:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756
    188757 3tec:E (2.0) BS01 CA 3.4.21.66 GO:0004252 ... P04072 1993669
    188758 3tec:E (2.0) BS02 CA 3.4.21.66 GO:0004252 ... P04072 1993669
    188759 3tec:E (2.0) BS03 CA 3.4.21.66 GO:0004252 ... P04072 1993669
    188760 3ted:A (2.0) BS01 dna 3.6.4.- N/A P32657 N/A
    188761 3ted:A (2.0) BS02 dna 3.6.4.- N/A P32657 N/A
    188762 3teg:A (2.2044) BS01 DAH 6.1.1.20 GO:0000049 ... O95363 22035791
    188763 3teh:A (2.8524) BS01 DAH 6.1.1.20 GO:0000049 ... P27001 22035791
    188764 3teh:B (2.8524) BS01 DAH 6.1.1.20 GO:0000049 ... P27002 22035791
    188765 3tei:A (2.404) BS01 peptide 2.7.11.24 GO:0000165 ... P28482 23047924
    188766 3tei:A (2.404) BS02 ANP 2.7.11.24 GO:0000165 ... P28482 23047924
    188767 3tel:A (1.8) BS01 ZTP ? GO:0006260 ... Q4K376 21964069
    188768 3tel:A (1.8) BS02 MN ? GO:0006260 ... Q4K376 21964069
    188769 3tem:A (1.45) BS01 ZN 1.10.5.1 GO:0001512 ... P16083 21859103
    188770 3tem:A (1.45) BS02 FAD 1.10.5.1 GO:0001512 ... P16083 21859103
    188771 3tem:A (1.45) BS03 6A1 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=14nM
    188772 3tem:A (1.45) BS04 6A1 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=14nM
    188773 3tem:B (1.45) BS01 6A1 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=14nM
    188774 3tem:B (1.45) BS02 6A1 1.10.5.1 GO:0001512 ... P16083 21859103 MOAD: ic50=14nM
    188775 3tem:B (1.45) BS03 ZN 1.10.5.1 GO:0001512 ... P16083 21859103
    188776 3tem:B (1.45) BS04 FAD 1.10.5.1 GO:0001512 ... P16083 21859103
    188777 3ten:A (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188778 3ten:B (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188779 3ten:C (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188780 3ten:D (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188781 3ten:E (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188782 3ten:F (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188783 3ten:G (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188784 3ten:H (2.6) BS01 ZN 3.13.1.5 GO:0004089 ... G0WXL9 22012399
    188785 3tep:A (2.03) BS01 MG ? GO:0006260 ... Q4K376 21964069
    188786 3tep:A (2.03) BS02 ZTP ? GO:0006260 ... Q4K376 21964069
    188787 3tew:A (1.45) BS01 CA ? GO:0005515 ... P13423 22063095
    188788 3tew:A (1.45) BS02 CA ? GO:0005515 ... P13423 22063095
    188789 3tew:A (1.45) BS03 MXE ? GO:0005515 ... P13423 22063095
    188790 3tew:A (1.45) BS04 MXE ? GO:0005515 ... P13423 22063095
    188791 3tex:A (1.7) BS01 CA ? GO:0005515 ... P13423 22063095
    188792 3tex:A (1.7) BS02 CA ? GO:0005515 ... P13423 22063095
    188793 3tey:A (2.12) BS01 CA ? GO:0005515 ... P13423 22063095
    188794 3tey:A (2.12) BS02 CA ? GO:0005515 ... P13423 22063095
    188795 3tez:A (1.83) BS01 CA ? GO:0005515 ... P13423 22063095
    188796 3tez:A (1.83) BS02 CA ? GO:0005515 ... P13423 22063095
    188797 3tez:A (1.83) BS03 MXE ? GO:0005515 ... P13423 22063095
    188798 3tez:A (1.83) BS04 MXE ? GO:0005515 ... P13423 22063095
    188799 3tf0:A (1.743) BS01 HEM ? GO:0020037 ... Q8RBX6 21997213
    188800 3tf0:A (1.743) BS02 OXY ? GO:0020037 ... Q8RBX6 21997213

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).