SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    191601 3ube:K (2.15) BS02 SIA ? GO:0019031 ... C3W5S1 22072785
    191602 3ubf:A (2.5) BS01 ZN ? GO:0005509 ... O15943 22171007
    191603 3ubf:A (2.5) BS02 ZN ? GO:0005509 ... O15943 22171007
    191604 3ubf:A (2.5) BS03 ZN ? GO:0005509 ... O15943 22171007
    191605 3ubf:A (2.5) BS04 ZN ? GO:0005509 ... O15943 22171007
    191606 3ubf:A (2.5) BS05 ZN ? GO:0005509 ... O15943 22171007
    191607 3ubf:A (2.5) BS06 ZN ? GO:0005509 ... O15943 22171007
    191608 3ubf:A (2.5) BS07 CA ? GO:0005509 ... O15943 22171007
    191609 3ubg:A (2.502) BS01 CA ? GO:0005509 ... O15943 22171007
    191610 3ubg:A (2.502) BS02 CA ? GO:0005509 ... O15943 22171007
    191611 3ubg:A (2.502) BS03 CA ? GO:0005509 ... O15943 22171007
    191612 3ubg:B (2.502) BS01 CA ? GO:0005509 ... O15943 22171007
    191613 3ubg:B (2.502) BS02 CA ? GO:0005509 ... O15943 22171007
    191614 3ubg:B (2.502) BS03 CA ? GO:0005509 ... O15943 22171007
    191615 3ubh:A (2.7) BS01 CA ? GO:0005509 ... O15943 22171007
    191616 3ubh:A (2.7) BS02 CA ? GO:0005509 ... O15943 22171007
    191617 3ubh:A (2.7) BS03 CA ? GO:0005509 ... O15943 22171007
    191618 3ubh:A (2.7) BS04 CA ? GO:0005509 ... O15943 22171007
    191619 3ubh:A (2.7) BS05 CA ? GO:0005509 ... O15943 22171007
    191620 3ubh:A (2.7) BS06 CA ? GO:0005509 ... O15943 22171007
    191621 3ubj:C (2.25) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191622 3ubj:G (2.25) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191623 3ubj:I (2.25) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191624 3ubj:K (2.25) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191625 3ubl:A (2.0) BS01 GSH ? GO:0004364 ... Q8F2Y8 N/A
    191626 3ubl:B (2.0) BS01 GSH ? GO:0004364 ... Q8F2Y8 N/A
    191627 3ubm:A (1.992) BS01 COA 2.8.3.16 GO:0003824 ... A9X6P7 22374910
    191628 3ubm:B (1.992) BS01 COA 2.8.3.16 GO:0003824 ... A9X6P7 22374910
    191629 3ubm:C (1.992) BS01 COA 2.8.3.16 GO:0003824 ... A9X6P7 22374910
    191630 3ubm:D (1.992) BS01 COA 2.8.3.16 GO:0003824 ... A9X6P7 22374910
    191631 3ubn:A (2.5079) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191632 3ubn:C (2.5079) BS01 GAL ? GO:0019031 ... C3W5S1 22072785
    191633 3ubn:C (2.5079) BS02 SIA ? GO:0019031 ... C3W5S1 22072785
    191634 3ubn:E (2.5079) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191635 3ubn:G (2.5079) BS01 GAL ? GO:0019031 ... C3W5S1 22072785
    191636 3ubn:G (2.5079) BS02 SIA ? GO:0019031 ... C3W5S1 22072785
    191637 3ubn:I (2.5079) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191638 3ubn:K (2.5079) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191639 3ubo:A (2.601) BS01 ADN 2.7.1.4 GO:0008865 ... Q92T17 N/A
    191640 3ubo:A (2.601) BS02 ADP 2.7.1.4 GO:0008865 ... Q92T17 N/A
    191641 3ubo:B (2.601) BS01 ADN 2.7.1.4 GO:0008865 ... Q92T17 N/A
    191642 3ubo:B (2.601) BS02 ADP 2.7.1.4 GO:0008865 ... Q92T17 N/A
    191643 3ubp:C (2.0) BS01 NI 3.5.1.5 GO:0005737 ... P41020 10368287
    191644 3ubp:C (2.0) BS02 NI 3.5.1.5 GO:0005737 ... P41020 10368287
    191645 3ubp:C (2.0) BS03 2PA 3.5.1.5 GO:0005737 ... P41020 10368287
    191646 3ubq:C (2.0) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191647 3ubq:I (2.0) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191648 3ubq:K (2.0) BS01 SIA ? GO:0019031 ... C3W5S1 22072785
    191649 3ubr:A (2.59) BS01 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191650 3ubr:A (2.59) BS02 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191651 3ubr:A (2.59) BS03 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191652 3ubr:A (2.59) BS04 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191653 3ubr:A (2.59) BS05 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191654 3ubr:A (2.59) BS06 CA 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191655 3ubr:A (2.59) BS07 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191656 3ubr:B (2.59) BS01 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191657 3ubr:B (2.59) BS02 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191658 3ubr:B (2.59) BS03 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191659 3ubr:B (2.59) BS04 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191660 3ubr:B (2.59) BS05 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191661 3ubr:B (2.59) BS06 HEC 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191662 3ubr:B (2.59) BS07 CA 1.7.2.2 GO:0005506 ... Q8EAC7 22382353
    191663 3ubt:A (2.502) BS01 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191664 3ubt:A (2.502) BS02 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191665 3ubt:A (2.502) BS03 ATP 2.1.1.37 GO:0003677 ... P20589 23012373
    191666 3ubt:B (2.502) BS01 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191667 3ubt:B (2.502) BS02 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191668 3ubt:B (2.502) BS03 ATP 2.1.1.37 GO:0003677 ... P20589 23012373
    191669 3ubt:Y (2.502) BS01 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191670 3ubt:Y (2.502) BS02 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191671 3ubt:Y (2.502) BS03 dna 2.1.1.37 GO:0003677 ... P20589 23012373
    191672 3ubt:Y (2.502) BS04 ATP 2.1.1.37 GO:0003677 ... P20589 23012373
    191673 3ubt:Y (2.502) BS05 ATP 2.1.1.37 GO:0003677 ... P20589 23012373
    191674 3ubv:A (3.2) BS01 HEM ? GO:0008941 ... B3DUZ7 22415930
    191675 3ubv:D (3.2) BS01 HEM ? GO:0008941 ... B3DUZ7 22415930
    191676 3ubv:G (3.2) BS01 HEM ? GO:0008941 ... B3DUZ7 22415930
    191677 3ubw:A (1.9) BS01 peptide ? GO:0000165 ... P62258 22151054
    191678 3ubw:A (1.9) BS02 6SP ? GO:0000165 ... P62258 22151054
    191679 3ubx:A (3.1) BS01 09N ? N/A P11609 22110136
    191680 3ubx:D (3.1) BS01 09N ? N/A P11609 22110136
    191681 3ubx:I (3.1) BS01 09N N/A N/A N/A 22110136
    191682 3ubx:L (3.1) BS01 09N N/A N/A N/A 22110136
    191683 3uby:A (2.0) BS01 dna 3.2.2.21 GO:0003677 ... P29372 22148158
    191684 3uby:A (2.0) BS02 dna 3.2.2.21 GO:0003677 ... P29372 22148158
    191685 3uc3:A (1.9) BS01 CO 2.7.11.1 GO:0004672 ... Q39193 22160701
    191686 3uc5:A (1.7) BS01 ATP 2.7.7.3 GO:0003824 ... P9WPA5 23151631
    191687 3ucb:A (1.38) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 22404139 MOAD: Kd=41nM
    191688 3ucb:B (1.38) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 22404139 MOAD: Kd=41nM
    191689 3ucb:B (1.38) BS02 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 22404139 MOAD: Kd=41nM
    191690 3ucc:A (1.5) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    191691 3ucc:A (1.5) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    191692 3ucc:B (1.5) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    191693 3ucc:B (1.5) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    191694 3ucd:A (1.41) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    191695 3ucd:A (1.41) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    191696 3ucd:B (1.41) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    191697 3ucd:B (1.41) BS02 PEP 4.2.1.11 GO:0000015 ... P09104 22437160
    191698 3uce:A (1.798) BS01 NDP ? GO:0016491 ... Q7MBY8 23311896
    191699 3uce:B (1.798) BS01 NDP ? GO:0016491 ... Q7MBY8 23311896
    191700 3uce:C (1.798) BS01 NDP ? GO:0016491 ... Q7MBY8 23311896
    191701 3uce:D (1.798) BS01 NDP ? GO:0016491 ... Q7MBY8 23311896
    191702 3ucj:A (1.85) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191703 3ucj:A (1.85) BS02 AZM 4.2.1.1 GO:0004089 ... Q96554 22162771 MOAD: Ki=1uM
    191704 3ucj:A (1.85) BS03 AZM 4.2.1.1 GO:0004089 ... Q96554 22162771 MOAD: Ki=1uM
    191705 3ucj:B (1.85) BS01 AZM 4.2.1.1 GO:0004089 ... Q96554 22162771 MOAD: Ki=1uM
    191706 3ucj:B (1.85) BS02 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191707 3ucj:B (1.85) BS03 AZM 4.2.1.1 GO:0004089 ... Q96554 22162771 MOAD: Ki=1uM
    191708 3uck:A (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191709 3uck:A (2.5) BS02 PO4 4.2.1.1 GO:0004089 ... Q96554 22162771
    191710 3uck:A (2.5) BS03 PO4 4.2.1.1 GO:0004089 ... Q96554 22162771
    191711 3uck:B (2.5) BS01 PO4 4.2.1.1 GO:0004089 ... Q96554 22162771
    191712 3uck:B (2.5) BS02 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191713 3uck:B (2.5) BS03 PO4 4.2.1.1 GO:0004089 ... Q96554 22162771
    191714 3ucl:A (2.36) BS01 FAD 1.14.13.22 GO:0004499 ... C0STX7 22506764
    191715 3ucl:A (2.36) BS02 NAP 1.14.13.22 GO:0004499 ... C0STX7 22506764 MOAD: Ki=0.165mM
    191716 3ucl:A (2.36) BS03 CYH 1.14.13.22 GO:0004499 ... C0STX7 22506764
    191717 3ucm:A (2.513) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191718 3ucm:B (2.513) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191719 3ucm:B (2.513) BS02 SCN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191720 3ucm:B (2.513) BS03 SCN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191721 3ucn:A (2.25) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191722 3ucn:A (2.25) BS02 AZI 4.2.1.1 GO:0004089 ... Q96554 22162771
    191723 3ucn:B (2.25) BS01 AZI 4.2.1.1 GO:0004089 ... Q96554 22162771
    191724 3ucn:B (2.25) BS02 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191725 3uco:A (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191726 3uco:B (2.5) BS01 ZN 4.2.1.1 GO:0004089 ... Q96554 22162771
    191727 3ucp:A (1.76) BS01 HEC ? GO:0016491 ... F8UWD6 22682743
    191728 3ucp:A (1.76) BS02 HEC ? GO:0016491 ... F8UWD6 22682743
    191729 3ucp:A (1.76) BS03 HEC ? GO:0016491 ... F8UWD6 22682743
    191730 3ucp:A (1.76) BS04 HEC ? GO:0016491 ... F8UWD6 22682743
    191731 3ucp:A (1.76) BS05 HEC ? GO:0016491 ... F8UWD6 22682743
    191732 3ucp:A (1.76) BS06 HEC ? GO:0016491 ... F8UWD6 22682743
    191733 3ucp:A (1.76) BS07 HEC ? GO:0016491 ... F8UWD6 22682743
    191734 3ucp:A (1.76) BS08 HEC ? GO:0016491 ... F8UWD6 22682743
    191735 3ucp:A (1.76) BS09 HEC ? GO:0016491 ... F8UWD6 22682743
    191736 3ucp:A (1.76) BS10 HEC ? GO:0016491 ... F8UWD6 22682743
    191737 3ucp:A (1.76) BS11 HEC ? GO:0016491 ... F8UWD6 22682743
    191738 3ucp:A (1.76) BS12 CA ? GO:0016491 ... F8UWD6 22682743
    191739 3ucp:A (1.76) BS13 MG ? GO:0016491 ... F8UWD6 22682743
    191740 3ucp:A (1.76) BS14 MG ? GO:0016491 ... F8UWD6 22682743
    191741 3uct:A (1.9) BS01 MN ? GO:0005509 ... P0DP23 22803592
    191742 3uct:A (1.9) BS02 MN ? GO:0005509 ... P0DP23 22803592
    191743 3uct:A (1.9) BS03 MN ? GO:0005509 ... P0DP23 22803592
    191744 3uct:A (1.9) BS04 MN ? GO:0005509 ... P0DP23 22803592
    191745 3uct:A (1.9) BS05 ZN ? GO:0005509 ... P0DP23 22803592
    191746 3uct:B (1.9) BS01 MN ? GO:0005509 ... P0DP23 22803592
    191747 3uct:B (1.9) BS02 MN ? GO:0005509 ... P0DP23 22803592
    191748 3uct:B (1.9) BS03 ZN ? GO:0005509 ... P0DP23 22803592
    191749 3uct:B (1.9) BS04 ZN ? GO:0005509 ... P0DP23 22803592
    191750 3uct:B (1.9) BS05 ZN ? GO:0005509 ... P0DP23 22803592
    191751 3ucu:P (2.8) BS01 rna ? GO:0003676 ... P09012 22148472
    191752 3ucw:A (1.76) BS01 MG ? GO:0005509 ... P0DP23 22803592
    191753 3ucw:B (1.76) BS01 MG ? GO:0005509 ... P0DP23 22803592
    191754 3ucw:C (1.76) BS01 MG ? GO:0005509 ... P0DP23 22803592
    191755 3ucw:D (1.76) BS01 MG ? GO:0005509 ... P0DP23 22803592
    191756 3ucy:A (1.8) BS01 MG ? GO:0005509 ... P0DP23 22803592
    191757 3ucy:A (1.8) BS02 ZN ? GO:0005509 ... P0DP23 22803592
    191758 3ucy:A (1.8) BS03 ZN ? GO:0005509 ... P0DP23 22803592
    191759 3ucz:P (2.8) BS01 rna ? GO:0003676 ... P09012 22148472
    191760 3ud3:P (3.1) BS01 rna ? GO:0003676 ... P09012 22148472
    191761 3ud4:P (2.7) BS01 rna ? GO:0003676 ... P09012 22148472
    191762 3ud5:A (2.0) BS01 J1A 2.7.6.3 GO:0000287 ... P26281 22169600 BindingDB: Kd=>150000nM, IC50=>100000nM
    191763 3ud6:A (2.091) BS01 3NK N/A GO:0004425 ... N/A 22075445
    191764 3ud7:B (2.8) BS01 IDY ? GO:0001658 ... P05230 23240683
    191765 3ud7:B (2.8) BS02 GNS ? GO:0001658 ... P05230 23240683
    191766 3ud8:A (2.37) BS01 IDY ? GO:0001658 ... P05230 23240683
    191767 3ud8:A (2.37) BS02 GNX ? GO:0001658 ... P05230 23240683
    191768 3ud9:B (2.34) BS01 IDY ? GO:0001658 ... P05230 23240683
    191769 3ud9:B (2.34) BS02 SGN ? GO:0001658 ... P05230 23240683
    191770 3uda:B (2.51) BS01 IDY ? GO:0001658 ... P05230 23240683
    191771 3uda:B (2.51) BS02 SUS ? GO:0001658 ... P05230 23240683
    191772 3udd:A (1.95) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 22260203
    191773 3udd:A (1.95) BS02 34M 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 22260203 BindingDB: Kd=79nM
    191774 3udd:B (1.95) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 22260203
    191775 3udd:B (1.95) BS02 34M 2.4.2.-
    2.4.2.30
    GO:0003950 ... O95271 22260203 BindingDB: Kd=79nM
    191776 3ude:A (1.881) BS01 J1B 2.7.6.3 GO:0000287 ... P26281 22169600
    191777 3udg:A (2.4) BS01 dna ? GO:0003697 ... Q9RY51 22570477
    191778 3udg:A (2.4) BS02 dna ? GO:0003697 ... Q9RY51 22570477
    191779 3udg:A (2.4) BS03 TMP ? GO:0003697 ... Q9RY51 22570477
    191780 3udg:B (2.4) BS01 dna ? GO:0003697 ... Q9RY51 22570477
    191781 3udg:B (2.4) BS02 dna ? GO:0003697 ... Q9RY51 22570477
    191782 3udg:B (2.4) BS03 dna ? GO:0003697 ... Q9RY51 22570477
    191783 3udg:B (2.4) BS04 TMP ? GO:0003697 ... Q9RY51 22570477
    191784 3udg:C (2.4) BS01 dna ? GO:0003697 ... Q9RY51 22570477
    191785 3udg:C (2.4) BS02 dna ? GO:0003697 ... Q9RY51 22570477
    191786 3udg:C (2.4) BS03 TMP ? GO:0003697 ... Q9RY51 22570477
    191787 3udh:A (1.7) BS01 091 3.4.23.46 GO:0004190 ... P56817 22468999 MOAD: Kd=1.4mM
    191788 3udh:A (1.7) BS02 ZN 3.4.23.46 GO:0004190 ... P56817 22468999
    191789 3udi:A (2.6) BS01 PNM 2.4.1.129
    3.4.16.4
    GO:0008658 ... G1C794 22050378
    191790 3udi:B (2.6) BS01 PNM 2.4.1.129
    3.4.16.4
    GO:0008658 ... G1C794 22050378
    191791 3udj:A (1.8) BS01 092 3.4.23.46 GO:0004190 ... P56817 22468999 MOAD: ic50=242uM
    191792 3udj:A (1.8) BS02 ZN 3.4.23.46 GO:0004190 ... P56817 22468999
    191793 3udk:A (2.51) BS01 095 3.4.23.46 GO:0004190 ... P56817 22468999
    191794 3udk:A (2.51) BS02 ZN 3.4.23.46 GO:0004190 ... P56817 22468999
    191795 3udk:A (2.51) BS03 ZN 3.4.23.46 GO:0004190 ... P56817 22468999
    191796 3udl:A (2.174) BS01 KLI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 21145235
    191797 3udl:B (2.174) BS01 KLI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 21145235
    191798 3udl:C (2.174) BS01 KLI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 21145235
    191799 3udl:D (2.174) BS01 KLI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 21145235
    191800 3udm:A (1.94) BS01 09A 3.4.23.46 GO:0004190 ... P56817 22468999 MOAD: ic50=33uM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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