SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    192401 3uim:A (2.2) BS01 ANP 2.7.10.1
    2.7.11.1
    GO:0004672 ... Q94F62 22547027
    192402 3uiq:A (1.879) BS01 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192403 3uiq:A (1.879) BS02 dna 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192404 3uiq:A (1.879) BS03 DUP 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192405 3uiq:A (1.879) BS04 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192406 3uiq:A (1.879) BS05 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192407 3uiq:A (1.879) BS06 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192408 3uiq:A (1.879) BS07 CA 2.7.7.7
    3.1.11.-
    GO:0000166 ... Q38087 22238207
    192409 3uiv:H (2.2) BS01 308 ? GO:0003677 ... P02768 N/A
    192410 3uiw:A (2.601) BS01 GSH ? GO:0001755 ... Q6DH06 N/A
    192411 3uiw:B (2.601) BS01 GSH ? GO:0001755 ... Q6DH06 N/A
    192412 3uix:A (2.2) BS01 Q17 2.7.11.1 GO:0004672 ... P11309 22306408 MOAD: ic50=0.151uM
    192413 3uix:A (2.2) BS02 CA 2.7.11.1 GO:0004672 ... P11309 22306408
    192414 3uj0:A (3.6) BS01 I3P ? GO:0005220 ... P29994 22286060 BindingDB: Kd=8.7nM, EC50=209nM
    192415 3uj0:B (3.6) BS01 I3P ? GO:0005220 ... P29994 22286060 BindingDB: Kd=8.7nM, EC50=209nM
    192416 3uj2:A (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192417 3uj2:B (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192418 3uj2:C (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192419 3uj2:D (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192420 3uj2:E (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192421 3uj2:F (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192422 3uj2:G (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192423 3uj2:H (2.0) BS01 MG 4.2.1.11 GO:0000015 ... B0MAG5 N/A
    192424 3uj6:A (1.974) BS01 SAM 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192425 3uj7:A (1.549) BS01 SAM 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192426 3uj7:B (1.549) BS01 SAM 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192427 3uj8:A (1.351) BS01 SFG 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192428 3uj9:A (1.24) BS01 PC 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061 MOAD: Kd=23.4uM
    192429 3uja:A (1.466) BS01 OPE 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192430 3ujb:A (1.521) BS01 OPE 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192431 3ujb:A (1.521) BS02 SAH 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192432 3ujb:B (1.521) BS01 OPE 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192433 3ujb:B (1.521) BS02 SAH 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061
    192434 3ujc:A (1.19) BS01 PC 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061 MOAD: Kd=26uM
    192435 3ujd:A (1.5) BS01 PC 2.1.1.103 GO:0000139 ... Q8IDQ9 22117061 MOAD: Kd=20.2uM
    192436 3uje:A (1.55) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192437 3uje:A (1.55) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    192438 3uje:B (1.55) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192439 3uje:B (1.55) BS02 PEP 4.2.1.11 GO:0000015 ... P09104 22437160
    192440 3ujf:A (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192441 3ujf:A (2.1) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    192442 3ujf:B (2.1) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192443 3ujf:B (2.1) BS02 PEP 4.2.1.11 GO:0000015 ... P09104 22437160
    192444 3ujg:B (2.6) BS01 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 22116026
    192445 3ujg:B (2.6) BS02 MG 3.1.3.16 GO:0004722 ... Q9CAJ0 22116026
    192446 3ujh:A (2.1) BS01 G6Q N/A GO:0004347 ... N/A N/A
    192447 3ujh:B (2.1) BS01 G6Q N/A GO:0004347 ... N/A N/A
    192448 3uji:H (1.6) BS01 peptide N/A N/A N/A 22164215
    192449 3uji:H (1.6) BS02 FUC N/A N/A N/A 22164215
    192450 3uji:L (1.6) BS01 peptide N/A N/A N/A 22164215
    192451 3ujj:H (2.0) BS01 peptide N/A N/A N/A 22164215
    192452 3ujj:L (2.0) BS01 peptide N/A N/A N/A 22164215
    192453 3ujk:A (1.9) BS01 MG 3.1.3.16 GO:0004722 ... O04719 22116026
    192454 3ujk:A (1.9) BS02 MG 3.1.3.16 GO:0004722 ... O04719 22116026
    192455 3ujk:A (1.9) BS03 MG 3.1.3.16 GO:0004722 ... O04719 22116026
    192456 3ujl:A (2.5) BS01 A8S ? GO:0004864 ... O80992 22116026
    192457 3ujl:B (2.5) BS01 MG 3.1.3.16 GO:0004722 ... O04719 22116026
    192458 3ujl:B (2.5) BS02 MG 3.1.3.16 GO:0004722 ... O04719 22116026
    192459 3ujm:A (2.741) BS01 EPE ? N/A Q9VFT4 22414690
    192460 3ujm:B (2.741) BS01 EPE ? N/A Q9VFT4 22414690
    192461 3ujn:A (2.98) BS01 ADP 6.3.5.3 GO:0004642 ... P74881 22683785
    192462 3ujn:A (2.98) BS02 MG 6.3.5.3 GO:0004642 ... P74881 22683785
    192463 3ujo:A (2.0) BS01 ADE ? GO:0030246 ... B3EWQ9 23794513
    192464 3ujo:A (2.0) BS02 GAL ? GO:0030246 ... B3EWQ9 23794513
    192465 3ujo:A (2.0) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192466 3ujo:A (2.0) BS04 CA ? GO:0030246 ... B3EWQ9 23794513
    192467 3ujo:A (2.0) BS05 ADE ? GO:0030246 ... B3EWQ9 23794513
    192468 3ujo:B (2.0) BS01 ADE ? GO:0030246 ... B3EWQ9 23794513
    192469 3ujo:B (2.0) BS02 GAL ? GO:0030246 ... B3EWQ9 23794513
    192470 3ujo:B (2.0) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192471 3ujo:B (2.0) BS04 CA ? GO:0030246 ... B3EWQ9 23794513
    192472 3ujo:C (2.0) BS01 ADE ? GO:0030246 ... B3EWQ9 23794513
    192473 3ujo:C (2.0) BS02 GAL ? GO:0030246 ... B3EWQ9 23794513
    192474 3ujo:C (2.0) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192475 3ujo:C (2.0) BS04 CA ? GO:0030246 ... B3EWQ9 23794513
    192476 3ujo:D (2.0) BS01 ADE ? GO:0030246 ... B3EWQ9 23794513
    192477 3ujo:D (2.0) BS02 ADE ? GO:0030246 ... B3EWQ9 23794513
    192478 3ujo:D (2.0) BS03 GAL ? GO:0030246 ... B3EWQ9 23794513
    192479 3ujo:D (2.0) BS04 MN ? GO:0030246 ... B3EWQ9 23794513
    192480 3ujo:D (2.0) BS05 CA ? GO:0030246 ... B3EWQ9 23794513
    192481 3ujp:A (2.7) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    192482 3ujp:B (2.7) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    192483 3ujp:C (2.7) BS01 MN ? GO:0007155 ... Q79EF9 23519795
    192484 3ujq:A (2.06) BS01 GAL ? GO:0030246 ... B3EWQ9 23794513
    192485 3ujq:A (2.06) BS02 CA ? GO:0030246 ... B3EWQ9 23794513
    192486 3ujq:A (2.06) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192487 3ujq:B (2.06) BS01 GAL ? GO:0030246 ... B3EWQ9 23794513
    192488 3ujq:B (2.06) BS02 CA ? GO:0030246 ... B3EWQ9 23794513
    192489 3ujq:B (2.06) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192490 3ujq:C (2.06) BS01 GAL ? GO:0030246 ... B3EWQ9 23794513
    192491 3ujq:C (2.06) BS02 CA ? GO:0030246 ... B3EWQ9 23794513
    192492 3ujq:C (2.06) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192493 3ujq:D (2.06) BS01 GAL ? GO:0030246 ... B3EWQ9 23794513
    192494 3ujq:D (2.06) BS02 CA ? GO:0030246 ... B3EWQ9 23794513
    192495 3ujq:D (2.06) BS03 MN ? GO:0030246 ... B3EWQ9 23794513
    192496 3ujr:A (1.4) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192497 3ujr:A (1.4) BS02 2PG 4.2.1.11 GO:0000015 ... P09104 22437160
    192498 3ujr:B (1.4) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192499 3ujr:B (1.4) BS02 PEP 4.2.1.11 GO:0000015 ... P09104 22437160
    192500 3ujs:A (1.65) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192501 3ujs:A (1.65) BS02 XSP 4.2.1.11 GO:0000015 ... P09104 22437160 MOAD: Ki=0.004mM
    192502 3ujs:B (1.65) BS01 MG 4.2.1.11 GO:0000015 ... P09104 22437160
    192503 3ujs:B (1.65) BS02 0V5 4.2.1.11 GO:0000015 ... P09104 22437160 MOAD: Ki=0.4mM
    192504 3ujz:A (2.5) BS01 ZN 3.4.24.- GO:0004222 ... O82882 22483117
    192505 3uk0:A (1.49) BS01 ENO ? N/A Q139W5 23606130
    192506 3uk2:A (2.25) BS01 AMP 6.3.2.1 GO:0003824 ... Q2T095 23382856
    192507 3uk2:B (2.25) BS01 AMP 6.3.2.1 GO:0003824 ... Q2T095 23382856
    192508 3uk3:C (2.1) BS01 dna ? N/A O75362 N/A
    192509 3uk3:C (2.1) BS02 dna ? N/A O75362 N/A
    192510 3uk3:C (2.1) BS03 ZN ? N/A O75362 N/A
    192511 3uk3:C (2.1) BS04 ZN ? N/A O75362 N/A
    192512 3uk3:D (2.1) BS01 dna ? N/A O75362 N/A
    192513 3uk3:D (2.1) BS02 dna ? N/A O75362 N/A
    192514 3uk3:D (2.1) BS03 ZN ? N/A O75362 N/A
    192515 3uk3:D (2.1) BS04 ZN ? N/A O75362 N/A
    192516 3uk4:A (1.98) BS01 peptide 3.4.21.- GO:0005576 ... P24627 N/A
    192517 3uk4:A (1.98) BS02 FE 3.4.21.- GO:0005576 ... P24627 N/A
    192518 3uk4:A (1.98) BS03 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    192519 3uk4:A (1.98) BS04 XXD 3.4.21.- GO:0005576 ... P24627 N/A
    192520 3uk6:A (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192521 3uk6:B (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192522 3uk6:C (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192523 3uk6:D (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192524 3uk6:E (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192525 3uk6:F (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192526 3uk6:G (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192527 3uk6:H (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192528 3uk6:I (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192529 3uk6:J (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192530 3uk6:K (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192531 3uk6:L (2.95) BS01 ADP 3.6.4.12 GO:0005524 ... Q9Y230 22748767
    192532 3uk8:A (2.3) BS01 CD 4.2.1.1 N/A Q50EL4 22381359
    192533 3uk8:B (2.3) BS01 CD 4.2.1.1 N/A Q50EL4 22381359
    192534 3uk9:A (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192535 3uk9:A (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192536 3uk9:B (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192537 3uk9:B (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192538 3uk9:C (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192539 3uk9:C (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192540 3uk9:D (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192541 3uk9:D (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192542 3uk9:E (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192543 3uk9:E (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192544 3uk9:F (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192545 3uk9:F (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192546 3uk9:G (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192547 3uk9:G (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192548 3uk9:H (3.11) BS01 CA ? GO:0030246 ... B3EWQ9 23794513
    192549 3uk9:H (3.11) BS02 MN ? GO:0030246 ... B3EWQ9 23794513
    192550 3uka:A (2.64) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192551 3uka:B (2.64) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192552 3uka:C (2.64) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192553 3uka:D (2.64) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192554 3ukd:A (1.9) BS01 ADP 2.7.4.14 GO:0000287 ... P20425 9280438
    192555 3ukd:A (1.9) BS02 C5P 2.7.4.14 GO:0000287 ... P20425 9280438
    192556 3ukd:A (1.9) BS03 AF3 2.7.4.14 GO:0000287 ... P20425 9280438
    192557 3ukf:A (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192558 3ukf:A (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192559 3ukf:B (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192560 3ukf:B (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192561 3ukf:C (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192562 3ukf:C (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192563 3ukf:D (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192564 3ukf:D (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192565 3ukf:E (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192566 3ukf:E (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192567 3ukf:F (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192568 3ukf:F (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192569 3ukf:G (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192570 3ukf:G (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192571 3ukf:H (2.5) BS01 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192572 3ukf:H (2.5) BS02 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192573 3ukg:A (2.95) BS01 dna ? GO:0000723 ... P11938 22139930
    192574 3ukg:A (2.95) BS02 dna ? GO:0000723 ... P11938 22139930
    192575 3ukg:A (2.95) BS03 CA ? GO:0000723 ... P11938 22139930
    192576 3ukh:A (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192577 3ukh:A (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192578 3ukh:B (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192579 3ukh:B (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192580 3ukh:C (2.3) BS01 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192581 3ukh:C (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192582 3ukh:D (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192583 3ukh:D (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192584 3ukh:E (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192585 3ukh:E (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192586 3ukh:F (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192587 3ukh:F (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192588 3ukh:G (2.3) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192589 3ukh:G (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192590 3ukh:H (2.3) BS01 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192591 3ukh:H (2.3) BS02 GDU 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192592 3ukj:A (1.6) BS01 ENO ? N/A Q2IU40 23606130
    192593 3ukk:A (2.75) BS01 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192594 3ukk:A (2.75) BS02 UDP 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192595 3ukk:B (2.75) BS01 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192596 3ukk:B (2.75) BS02 UDP 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192597 3ukk:C (2.75) BS01 FAD 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192598 3ukk:C (2.75) BS02 UDP 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192599 3ukk:D (2.75) BS01 FDA 5.4.99.9 GO:0008767 ... Q4W1X2 22334662
    192600 3ukk:D (2.75) BS02 UDP 5.4.99.9 GO:0008767 ... Q4W1X2 22334662

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).