SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19401 1hb3:A (1.4) BS01 SCV 1.21.3.1 GO:0005506 ... P05326 11755401
    19402 1hb3:A (1.4) BS02 FE2 1.21.3.1 GO:0005506 ... P05326 11755401
    19403 1hb4:A (1.5) BS01 SCV 1.21.3.1 GO:0005506 ... P05326 11755401
    19404 1hb4:A (1.5) BS02 FE2 1.21.3.1 GO:0005506 ... P05326 11755401
    19405 1hba:A (2.1) BS01 HEM ? GO:0004601 ... P69905 1567857
    19406 1hba:B (2.1) BS01 HEM ? GO:0004601 ... P68871 1567857
    19407 1hba:C (2.1) BS01 HEM ? GO:0004601 ... P69905 1567857
    19408 1hba:D (2.1) BS01 HEM ? GO:0004601 ... P68871 1567857
    19409 1hbb:A (1.9) BS01 HEM ? GO:0004601 ... P69905 1567857
    19410 1hbb:B (1.9) BS01 HEM ? GO:0004601 ... P68871 1567857
    19411 1hbb:C (1.9) BS01 HEM ? GO:0004601 ... P69905 1567857
    19412 1hbb:D (1.9) BS01 HEM ? GO:0004601 ... P68871 1567857
    19413 1hbg:A (1.5) BS01 HEM ? GO:0019825 ... P02216 2585515
    19414 1hbh:A (2.2) BS01 HEM ? GO:0004601 ... P80043 7623382
    19415 1hbh:B (2.2) BS01 HEM ? GO:0004601 ... P80044 7623382
    19416 1hbh:C (2.2) BS01 HEM ? GO:0004601 ... P80043 7623382
    19417 1hbh:D (2.2) BS01 HEM ? GO:0004601 ... P80044 7623382
    19418 1hbi:A (1.7) BS01 HEM ? GO:0005737 ... P02213 7929217
    19419 1hbi:A (1.7) BS02 OXY ? GO:0005737 ... P02213 7929217
    19420 1hbi:A (1.7) BS03 HEM ? GO:0005737 ... P02213 7929217
    19421 1hbi:B (1.7) BS01 HEM ? GO:0005737 ... P02213 7929217
    19422 1hbi:B (1.7) BS02 HEM ? GO:0005737 ... P02213 7929217
    19423 1hbi:B (1.7) BS03 OXY ? GO:0005737 ... P02213 7929217
    19424 1hbj:A (2.5) BS01 FBQ 3.1.1.7 GO:0001507 ... P04058 11563919 BindingDB: IC50=11000nM
    19425 1hbk:A (2.0) BS01 COA ? GO:0000062 ... Q8IK57 11491287
    19426 1hbm:A (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19427 1hbm:A (1.8) BS02 SHT 2.8.4.1 GO:0005737 ... P11558 11491299
    19428 1hbm:A (1.8) BS03 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19429 1hbm:A (1.8) BS04 SHT 2.8.4.1 GO:0005737 ... P11558 11491299
    19430 1hbm:B (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19431 1hbm:B (1.8) BS02 SHT 2.8.4.1 GO:0005737 ... P11560 11491299
    19432 1hbm:C (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19433 1hbm:D (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19434 1hbm:D (1.8) BS02 SHT 2.8.4.1 GO:0005737 ... P11558 11491299
    19435 1hbm:D (1.8) BS03 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19436 1hbm:D (1.8) BS04 SHT 2.8.4.1 GO:0005737 ... P11558 11491299
    19437 1hbm:E (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19438 1hbm:E (1.8) BS02 SHT 2.8.4.1 GO:0005737 ... P11560 11491299
    19439 1hbm:F (1.8) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19440 1hbn:A (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19441 1hbn:A (1.16) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19442 1hbn:A (1.16) BS03 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19443 1hbn:A (1.16) BS04 MG 2.8.4.1 GO:0005737 ... P11558 11491299
    19444 1hbn:A (1.16) BS05 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19445 1hbn:A (1.16) BS06 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19446 1hbn:B (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19447 1hbn:B (1.16) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19448 1hbn:B (1.16) BS03 COM 2.8.4.1 GO:0005737 ... P11560 11491299
    19449 1hbn:C (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19450 1hbn:D (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19451 1hbn:D (1.16) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19452 1hbn:D (1.16) BS03 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19453 1hbn:D (1.16) BS04 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19454 1hbn:D (1.16) BS05 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19455 1hbn:E (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19456 1hbn:E (1.16) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19457 1hbn:E (1.16) BS03 COM 2.8.4.1 GO:0005737 ... P11560 11491299
    19458 1hbn:F (1.16) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19459 1hbn:F (1.16) BS02 MG 2.8.4.1 GO:0005737 ... P11562 11491299
    19460 1hbo:A (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19461 1hbo:A (1.78) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19462 1hbo:A (1.78) BS03 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19463 1hbo:A (1.78) BS04 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19464 1hbo:A (1.78) BS05 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19465 1hbo:B (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19466 1hbo:B (1.78) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19467 1hbo:B (1.78) BS03 COM 2.8.4.1 GO:0005737 ... P11560 11491299
    19468 1hbo:C (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19469 1hbo:D (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19470 1hbo:D (1.78) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19471 1hbo:D (1.78) BS03 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19472 1hbo:D (1.78) BS04 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19473 1hbo:D (1.78) BS05 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19474 1hbo:E (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19475 1hbo:E (1.78) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19476 1hbo:F (1.78) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19477 1hbp:A (1.9) BS01 RTL ? GO:0005501 ... P18902 8496140
    19478 1hbr:A (2.3) BS01 HEM ? GO:0005344 ... P02001 10037733
    19479 1hbr:B (2.3) BS01 HEM ? GO:0005344 ... P02112 10037733
    19480 1hbr:C (2.3) BS01 HEM ? GO:0005344 ... P02001 10037733
    19481 1hbr:D (2.3) BS01 HEM ? GO:0005344 ... P02112 10037733
    19482 1hbs:A (3.0) BS01 HEM ? GO:0004601 ... P69905 4008491
    19483 1hbs:B (3.0) BS01 HEM ? GO:0004601 ... P68871 4008491
    19484 1hbs:C (3.0) BS01 HEM ? GO:0004601 ... P69905 4008491
    19485 1hbs:D (3.0) BS01 HEM ? GO:0004601 ... P68871 4008491
    19486 1hbs:E (3.0) BS01 HEM ? GO:0004601 ... P69905 4008491
    19487 1hbs:F (3.0) BS01 HEM ? GO:0004601 ... P68871 4008491
    19488 1hbs:G (3.0) BS01 HEM ? GO:0004601 ... P69905 4008491
    19489 1hbs:H (3.0) BS01 HEM ? GO:0004601 ... P68871 4008491
    19490 1hbt:H (2.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 7547884
    19491 1hbt:H (2.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 7547884
    19492 1hbu:A (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19493 1hbu:A (1.9) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19494 1hbu:A (1.9) BS03 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19495 1hbu:A (1.9) BS04 MG 2.8.4.1 GO:0005737 ... P11558 11491299
    19496 1hbu:A (1.9) BS05 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19497 1hbu:A (1.9) BS06 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19498 1hbu:B (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19499 1hbu:B (1.9) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19500 1hbu:B (1.9) BS03 COM 2.8.4.1 GO:0005737 ... P11560 11491299
    19501 1hbu:C (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19502 1hbu:D (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19503 1hbu:D (1.9) BS02 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19504 1hbu:D (1.9) BS03 F43 2.8.4.1 GO:0005737 ... P11558 11491299
    19505 1hbu:D (1.9) BS04 TP7 2.8.4.1 GO:0005737 ... P11558 11491299
    19506 1hbu:D (1.9) BS05 COM 2.8.4.1 GO:0005737 ... P11558 11491299
    19507 1hbu:E (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11560 11491299
    19508 1hbu:E (1.9) BS02 TP7 2.8.4.1 GO:0005737 ... P11560 11491299
    19509 1hbu:E (1.9) BS03 COM 2.8.4.1 GO:0005737 ... P11560 11491299
    19510 1hbu:F (1.9) BS01 F43 2.8.4.1 GO:0005737 ... P11562 11491299
    19511 1hbv:A (2.3) BS01 GAN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 7650677 MOAD: Ki=430nM
    19512 1hbv:B (2.3) BS01 GAN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 7650677
    19513 1hbx:A (3.15) BS01 dna ? GO:0000981 ... P11831 11406578
    19514 1hbx:A (3.15) BS02 dna ? GO:0000981 ... P11831 11406578
    19515 1hbx:B (3.15) BS01 dna ? GO:0000981 ... P11831 11406578
    19516 1hbx:B (3.15) BS02 dna ? GO:0000981 ... P11831 11406578
    19517 1hbx:D (3.15) BS01 dna ? GO:0000981 ... P11831 11406578
    19518 1hbx:D (3.15) BS02 dna ? GO:0000981 ... P11831 11406578
    19519 1hbx:E (3.15) BS01 dna ? GO:0000981 ... P11831 11406578
    19520 1hbx:E (3.15) BS02 dna ? GO:0000981 ... P11831 11406578
    19521 1hbx:G (3.15) BS01 dna ? GO:0003700 ... P28324 11406578
    19522 1hbx:G (3.15) BS02 dna ? GO:0003700 ... P28324 11406578
    19523 1hbx:H (3.15) BS01 dna ? GO:0003700 ... P28324 11406578
    19524 1hbx:H (3.15) BS02 dna ? GO:0003700 ... P28324 11406578
    19525 1hby:A (2.0) BS01 PO4 3.1.27.- GO:0001525 ... P03950 11468363
    19526 1hbz:A (1.5) BS01 HEM 1.11.1.6 GO:0004096 ... P29422 1426241
    19527 1hc1:A (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19528 1hc1:A (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19529 1hc1:B (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19530 1hc1:B (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19531 1hc1:C (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19532 1hc1:C (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19533 1hc1:D (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19534 1hc1:D (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19535 1hc1:E (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19536 1hc1:E (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19537 1hc1:F (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19538 1hc1:F (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19539 1hc7:A (2.43) BS01 ZN 6.1.1.15 GO:0000166 ... Q5SM28 11399074
    19540 1hc7:B (2.43) BS01 ZN 6.1.1.15 GO:0000166 ... Q5SM28 11399074
    19541 1hc7:C (2.43) BS01 ZN 6.1.1.15 GO:0000166 ... Q5SM28 11399074
    19542 1hc7:D (2.43) BS01 ZN 6.1.1.15 GO:0000166 ... Q5SM28 11399074
    19543 1hc8:A (2.8) BS01 rna ? GO:0003735 ... P56210 12054794
    19544 1hc8:B (2.8) BS01 rna ? GO:0003735 ... P56210 12054794
    19545 1hc9:A (1.8) BS01 peptide ? GO:0005515 ... P60616 11683996
    19546 1hc9:B (1.8) BS01 peptide ? GO:0005515 ... P60615 11683996
    19547 1hca:A (2.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    19548 1hcb:A (1.6) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00915 8057362
    19549 1hcb:A (1.6) BS02 BCT 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00915 8057362 BindingDB: Ki=12000000nM
    19550 1hch:A (1.57) BS01 HEM 1.11.1.7 GO:0004601 ... P00433 12024218
    19551 1hch:A (1.57) BS02 CA 1.11.1.7 GO:0004601 ... P00433 12024218
    19552 1hch:A (1.57) BS03 CA 1.11.1.7 GO:0004601 ... P00433 12024218
    19553 1hch:A (1.57) BS04 O 1.11.1.7 GO:0004601 ... P00433 12024218
    19554 1hck:A (1.9) BS01 MG 2.7.11.22 GO:0000082 ... P24941 8917641
    19555 1hck:A (1.9) BS02 ATP 2.7.11.22 GO:0000082 ... P24941 8917641
    19556 1hcm:A (2.5) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 11373294
    19557 1hcm:A (2.5) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 11373294
    19558 1hcm:B (2.5) BS01 HEC 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 11373294
    19559 1hcm:B (2.5) BS02 DHE 1.7.2.1
    1.7.99.1
    GO:0009055 ... P72181 11373294
    19560 1hco:A (2.7) BS01 HEM ? GO:0004601 ... P69905 7373648
    19561 1hco:B (2.7) BS01 HEM ? GO:0004601 ... P68871 7373648
    19562 1hcp:A (-1.00) BS01 ZN ? GO:0003700 ... P03372 16100953
    19563 1hcp:A (-1.00) BS02 ZN ? GO:0003700 ... P03372 16100953
    19564 1hcq:A (2.4) BS01 dna ? GO:0003700 ... P03372 8221895
    19565 1hcq:A (2.4) BS02 dna ? GO:0003700 ... P03372 8221895
    19566 1hcq:A (2.4) BS03 ZN ? GO:0003700 ... P03372 8221895
    19567 1hcq:A (2.4) BS04 ZN ? GO:0003700 ... P03372 8221895
    19568 1hcq:B (2.4) BS01 dna ? GO:0003700 ... P03372 8221895
    19569 1hcq:B (2.4) BS02 dna ? GO:0003700 ... P03372 8221895
    19570 1hcq:B (2.4) BS03 ZN ? GO:0003700 ... P03372 8221895
    19571 1hcq:B (2.4) BS04 ZN ? GO:0003700 ... P03372 8221895
    19572 1hcq:E (2.4) BS01 dna ? GO:0003700 ... P03372 8221895
    19573 1hcq:E (2.4) BS02 dna ? GO:0003700 ... P03372 8221895
    19574 1hcq:E (2.4) BS03 ZN ? GO:0003700 ... P03372 8221895
    19575 1hcq:E (2.4) BS04 ZN ? GO:0003700 ... P03372 8221895
    19576 1hcq:F (2.4) BS01 dna ? GO:0003700 ... P03372 8221895
    19577 1hcq:F (2.4) BS02 dna ? GO:0003700 ... P03372 8221895
    19578 1hcq:F (2.4) BS03 ZN ? GO:0003700 ... P03372 8221895
    19579 1hcq:F (2.4) BS04 ZN ? GO:0003700 ... P03372 8221895
    19580 1hcr:A (2.3) BS01 dna ? GO:0000150 ... P03013 8278807
    19581 1hcr:A (2.3) BS02 dna ? GO:0000150 ... P03013 8278807
    19582 1hcs:B (-1.00) BS01 peptide 2.7.10.2 N/A P12931 7532003
    19583 1hct:B (-1.00) BS01 peptide 2.7.10.2 N/A P12931 7532003
    19584 1hcx:A (2.6) BS01 TPT 3.5.1.28 N/A P06653 11694890
    19585 1hcx:A (2.6) BS02 CHT 3.5.1.28 N/A P06653 11694890
    19586 1hcx:A (2.6) BS03 CHT 3.5.1.28 N/A P06653 11694890
    19587 1hcx:A (2.6) BS04 CHT 3.5.1.28 N/A P06653 11694890
    19588 1hcx:B (2.6) BS01 CHT 3.5.1.28 N/A P06653 11694890
    19589 1hcx:B (2.6) BS02 CHT 3.5.1.28 N/A P06653 11694890
    19590 1hcy:A (3.2) BS01 CU ? GO:0005576 ... P04254 2585484
    19591 1hcy:A (3.2) BS02 CU ? GO:0005576 ... P04254 2585484
    19592 1hcz:A (1.96) BS01 HEM ? GO:0005506 ... P36438 8762139
    19593 1hda:A (2.2) BS01 HEM ? GO:0005344 ... P01966 8411160
    19594 1hda:B (2.2) BS01 HEM ? GO:0005344 ... P02070 8411160
    19595 1hda:C (2.2) BS01 HEM ? GO:0005344 ... P01966 8411160
    19596 1hda:D (2.2) BS01 HEM ? GO:0005344 ... P02070 8411160
    19597 1hdb:A (2.2) BS01 HEM ? GO:0004601 ... P69905 8639677
    19598 1hdb:B (2.2) BS01 HEM ? GO:0004601 ... P68871 8639677
    19599 1hdb:C (2.2) BS01 HEM ? GO:0004601 ... P69905 8639677
    19600 1hdb:D (2.2) BS01 HEM ? GO:0004601 ... P68871 8639677

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).