SEQ2FUN

BioLiP
Download all results in tab-seperated text for 57 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1izl:0 (3.7) BS01 HEM ? GO:0005506 ... P0A387 12518057
    2 1izl:A (3.7) BS01 CLA 1.10.3.9 GO:0005506 ... P51765 12518057
    3 1izl:A (3.7) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 12518057
    4 1izl:B (3.7) BS01 CLA ? GO:0009521 ... Q8DIQ1 12518057
    5 1izl:B (3.7) BS02 CLA ? GO:0009521 ... Q8DIQ1 12518057
    6 1izl:B (3.7) BS03 CLA ? GO:0009521 ... Q8DIQ1 12518057
    7 1izl:B (3.7) BS04 CLA ? GO:0009521 ... Q8DIQ1 12518057
    8 1izl:B (3.7) BS05 CLA ? GO:0009521 ... Q8DIQ1 12518057
    9 1izl:B (3.7) BS06 CLA ? GO:0009521 ... Q8DIQ1 12518057
    10 1izl:B (3.7) BS07 CLA ? GO:0009521 ... Q8DIQ1 12518057
    11 1izl:B (3.7) BS08 CLA ? GO:0009521 ... Q8DIQ1 12518057
    12 1izl:B (3.7) BS09 CLA ? GO:0009521 ... Q8DIQ1 12518057
    13 1izl:C (3.7) BS01 peptide ? GO:0005737 ... Q8DIF8 12518057
    14 1izl:C (3.7) BS02 CLA ? GO:0005737 ... Q8DIF8 12518057
    15 1izl:C (3.7) BS03 CLA ? GO:0005737 ... Q8DIF8 12518057
    16 1izl:C (3.7) BS04 CLA ? GO:0005737 ... Q8DIF8 12518057
    17 1izl:C (3.7) BS05 CLA ? GO:0005737 ... Q8DIF8 12518057
    18 1izl:C (3.7) BS06 CLA ? GO:0005737 ... Q8DIF8 12518057
    19 1izl:C (3.7) BS07 CLA ? GO:0005737 ... Q8DIF8 12518057
    20 1izl:C (3.7) BS08 CLA ? GO:0005737 ... Q8DIF8 12518057
    21 1izl:C (3.7) BS09 CLA ? GO:0005737 ... Q8DIF8 12518057
    22 1izl:C (3.7) BS10 CLA ? GO:0005737 ... Q8DIF8 12518057
    23 1izl:C (3.7) BS11 CLA ? GO:0005737 ... Q8DIF8 12518057
    24 1izl:D (3.7) BS01 PHO 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    25 1izl:D (3.7) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    26 1izl:D (3.7) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    27 1izl:D (3.7) BS04 PLA 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    28 1izl:E (3.7) BS01 peptide ? GO:0005506 ... Q8DIP0 12518057
    29 1izl:J (3.7) BS01 MN 1.10.3.9 GO:0005506 ... P51765 12518057
    30 1izl:J (3.7) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 12518057
    31 1izl:J (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 12518057
    32 1izl:L (3.7) BS01 CLA ? GO:0009521 ... Q8DIQ1 12518057
    33 1izl:L (3.7) BS02 CLA ? GO:0009521 ... Q8DIQ1 12518057
    34 1izl:L (3.7) BS03 CLA ? GO:0009521 ... Q8DIQ1 12518057
    35 1izl:L (3.7) BS04 CLA ? GO:0009521 ... Q8DIQ1 12518057
    36 1izl:L (3.7) BS05 CLA ? GO:0009521 ... Q8DIQ1 12518057
    37 1izl:L (3.7) BS06 CLA ? GO:0009521 ... Q8DIQ1 12518057
    38 1izl:L (3.7) BS07 CLA ? GO:0009521 ... Q8DIQ1 12518057
    39 1izl:L (3.7) BS08 CLA ? GO:0009521 ... Q8DIQ1 12518057
    40 1izl:L (3.7) BS09 CLA ? GO:0009521 ... Q8DIQ1 12518057
    41 1izl:L (3.7) BS10 CLA ? GO:0009521 ... Q8DIQ1 12518057
    42 1izl:M (3.7) BS01 peptide ? GO:0005737 ... Q8DIF8 12518057
    43 1izl:M (3.7) BS02 CLA ? GO:0005737 ... Q8DIF8 12518057
    44 1izl:M (3.7) BS03 CLA ? GO:0005737 ... Q8DIF8 12518057
    45 1izl:M (3.7) BS04 CLA ? GO:0005737 ... Q8DIF8 12518057
    46 1izl:M (3.7) BS05 CLA ? GO:0005737 ... Q8DIF8 12518057
    47 1izl:M (3.7) BS06 CLA ? GO:0005737 ... Q8DIF8 12518057
    48 1izl:M (3.7) BS07 CLA ? GO:0005737 ... Q8DIF8 12518057
    49 1izl:M (3.7) BS08 CLA ? GO:0005737 ... Q8DIF8 12518057
    50 1izl:M (3.7) BS09 CLA ? GO:0005737 ... Q8DIF8 12518057
    51 1izl:M (3.7) BS10 CLA ? GO:0005737 ... Q8DIF8 12518057
    52 1izl:N (3.7) BS01 peptide 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    53 1izl:N (3.7) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    54 1izl:N (3.7) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    55 1izl:N (3.7) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    56 1izl:N (3.7) BS05 PLA 1.10.3.9 GO:0005506 ... Q8CM25 12518057
    57 1izl:V (3.7) BS01 HEM ? GO:0005506 ... P0A387 12518057
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).