SEQ2FUN

BioLiP
Download all results in tab-seperated text for 17 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4hlq:B (3.3) BS01 MG 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    2 4hlq:B (3.3) BS02 GDP 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    3 4hlq:B (3.3) BS03 BEF 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    4 4hlq:D (3.3) BS01 MG 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    5 4hlq:D (3.3) BS02 GDP 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    6 4hlq:D (3.3) BS03 BEF 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    7 4hlq:F (3.3) BS01 MG 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    8 4hlq:F (3.3) BS02 GDP 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    9 4hlq:F (3.3) BS03 BEF 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    10 4hlq:G (3.3) BS01 BEF ? GO:0005096 ... Q96BZ9 23236136
    11 4hlq:H (3.3) BS01 MG 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    12 4hlq:H (3.3) BS02 GDP 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    13 4hlq:H (3.3) BS03 BEF 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    14 4hlq:I (3.3) BS01 BEF ? GO:0005096 ... Q96BZ9 23236136
    15 4hlq:J (3.3) BS01 MG 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    16 4hlq:J (3.3) BS02 GDP 3.6.5.2 GO:0003924 ... Q9H0U4 23236136
    17 4hlq:J (3.3) BS03 BEF 3.6.5.2 GO:0003924 ... Q9H0U4 23236136

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).