SEQ2FUN

BioLiP
Download all results in tab-seperated text for 24 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5d0f:A (3.3) BS01 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    2 5d0f:A (3.3) BS02 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    3 5d0f:A (3.3) BS03 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    4 5d0f:A (3.3) BS04 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    5 5d0f:A (3.3) BS05 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    6 5d0f:A (3.3) BS06 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    7 5d0f:A (3.3) BS07 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    8 5d0f:A (3.3) BS08 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    9 5d0f:A (3.3) BS09 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    10 5d0f:A (3.3) BS10 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    11 5d0f:A (3.3) BS11 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    12 5d0f:B (3.3) BS01 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    13 5d0f:B (3.3) BS02 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    14 5d0f:B (3.3) BS03 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    15 5d0f:B (3.3) BS04 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    16 5d0f:B (3.3) BS05 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    17 5d0f:B (3.3) BS06 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    18 5d0f:B (3.3) BS07 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    19 5d0f:B (3.3) BS08 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    20 5d0f:B (3.3) BS09 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    21 5d0f:B (3.3) BS10 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    22 5d0f:B (3.3) BS11 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    23 5d0f:B (3.3) BS12 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    24 5d0f:B (3.3) BS13 GLC 2.4.1.25
    3.2.1.33    		 GO:0004134 ... Q6FSK0 27088557
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).