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BioLiP

PDB CCD ID: A1ICD
Number of entries in BioLiP: 2
Chemical formula: C24 H29 N5 Ni O6 S
InChI: InChI=1S/C24H27N5O2S.Ni.2H2O.2O/c1-29(20(30)7-3-2-6-19-23-18(14-32-19)27-24(31)28-23)13-16-10-12-26-22-17(16)9-8-15-5-4-11-25-21(15)22;;;;;/h4-5,8-12,18-19,23H,2-3,6-7,13-14H2,1H3,(H2,27,28,31);;2*1H2;;/q;+4;;;2*-1/p-2/t18-,19-,23-;;;;;/m0...../s1
InChIKey: FBTOJTGKJUIUQP-ZJHXQHFDSA-L
SMILES:
SoftwareSMILES
OpenEye OEToolkits 2.0.7CN(Cc1cc[n+]2c3c1ccc4c3[n+](ccc4)[Ni]2(O)(O)([O-])[O-])C(=O)CCCC[C@H]5[C@@H]6[C@H](CS5)NC(=O)N6
CACTVS 3.385CN(Cc1cc[n+]2c3c1ccc4ccc[n+](c34)[Ni]2(O)(O)([O-])[O-])C(=O)CCCC[C@@H]5SC[C@@H]6NC(=O)N[C@H]56
OpenEye OEToolkits 2.0.7CN(Cc1cc[n+]2c3c1ccc4c3[n+](ccc4)[Ni]2(O)(O)([O-])[O-])C(=O)CCCCC5C6C(CS5)NC(=O)N6
CACTVS 3.385CN(Cc1cc[n+]2c3c1ccc4ccc[n+](c34)[Ni]2(O)(O)([O-])[O-])C(=O)CCCC[CH]5SC[CH]6NC(=O)N[CH]56
Name:N-methyl-N-[(4,4,6,6-tetrahydroxy-4,6-dioxido-1,3,3a,5,6a-tetrahydrothien[3,4-d]imidazol-4-ium-2-yl)methyl]-5-(2,4,4-trihydroxy-2-keto-3,3a,5,6-tetrahydro-1H-thien[3,4-d]imidazol-4-ium-6-yl

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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