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BioLiP

PDB CCD ID: VAW
Number of entries in BioLiP: 2
Chemical formula: C27 H36 N2 O9
InChI: InChI=1S/C27H36N2O9/c1-3-16-18(9-11-28-10-8-15-12-29-20-7-5-4-6-17(15)20)19(25(34)35-2)14-36-26(16)38-27-24(33)23(32)22(31)21(13-30)37-27/h3-7,12,14,16,18,21-24,26-33H,1,8-11,13H2,2H3/t16-,18+,21-,22-,23+,24-,26+,27+/m1/s1
InChIKey: MYFRJCYMRYXZQB-JVARDMDOSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.5.0COC(=O)C1=COC(C(C1CCNCCc2c[nH]c3c2cccc3)C=C)OC4C(C(C(C(O4)CO)O)O)O
CACTVS 3.341COC(=O)C1=CO[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](C=C)[CH]1CCNCCc3c[nH]c4ccccc34
ACDLabs 10.04O=C(OC)C2=COC(OC1OC(C(O)C(O)C1O)CO)C(\C=C)C2CCNCCc4c3ccccc3nc4
OpenEye OEToolkits 1.5.0COC(=O)C1=CO[C@H]([C@@H]([C@@H]1CCNCCc2c[nH]c3c2cccc3)C=C)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
CACTVS 3.341COC(=O)C1=CO[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](C=C)[C@@H]1CCNCCc3c[nH]c4ccccc34
Name:(2S,3R,4S)-methyl 4-(2-(2-(1H-indol-3-yl)ethylamino)ethyl)-2-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)-3-vinyl-3,4-dihydro-2H-pyran-5-carboxylate;
methyl (2S,3R,4S)-3-ethenyl-2-(beta-D-glucopyranosyloxy)-4-(2-{[2-(1H-indol-3-yl)ethyl]amino}ethyl)-3,4-dihydro-2H-pyran-5-carboxylate
ZINC: ZINC000058650085
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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