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BioLiP

PDB CCD ID: VHH
Number of entries in BioLiP: 4
Chemical formula: C12 H20 N2 O3 S
InChI: InChI=1S/C12H20N2O3S/c1-13-8-7-18-9(5-3-4-6-10(15)16)11(8)14(2)12(13)17/h8-9,11H,3-7H2,1-2H3,(H,15,16)/t8-,9-,11-/m0/s1
InChIKey: PECDAVNFXWSGFV-QXEWZRGKSA-N
SMILES:
SoftwareSMILES
CACTVS 3.370CN1[CH]2CS[CH](CCCCC(O)=O)[CH]2N(C)C1=O
CACTVS 3.370CN1[C@H]2CS[C@@H](CCCCC(O)=O)[C@H]2N(C)C1=O
OpenEye OEToolkits 1.7.2CN1[C@H]2CS[C@H]([C@H]2N(C1=O)C)CCCCC(=O)O
ACDLabs 12.01O=C(O)CCCCC1SCC2N(C(=O)N(C12)C)C
OpenEye OEToolkits 1.7.2CN1C2CSC(C2N(C1=O)C)CCCCC(=O)O
Name:5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid
ZINC: ZINC000095921434

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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