SEQ2FUN

BioLiP

What is new in BioLiP2?

BioLiP2 is a major update released in Febuary 2023. New additions and modifications are listed below.
Feature BioLiP2 BioLiP1
Database search Search by name, sequence and structure. Search by name only
Nucleic acid ligands All DNA/RNA ligands regardless of length. Differentiate DNA vs RNA. <30 nucleotides only. Do not differentiate DNA vs RNA.
Nucleic acid sequences Viewable and searchable. Do not include.
Source data mmCIF/PDBx format files from the PDB database. Legacy PDB format files from the PDB database.
Gene Ontology (GO) terms List GO terms and draws directed acyclic graphs for GO terms and their parents. Only list terms.
Information for small molecule ligands PDB ligand ID, chemical formula, InChI, SMILES, crosslinks to external small molecule databases (ChEMBL, DrugBank, ZINC), structure, full name. PDB ligand ID, chemical formula, structure, full name.
Source code Fully open-source. Unavailable.


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