BioLiP

PDB

BioLiP

PDB CCD ID:

3D5

Number of entries in BioLiP:

Chemical formula:

C18 H24 N4 O

InChI:

InChI=1S/C18H24N4O/c19-10-2-1-5-17(18(20)23)22-12-14-6-8-15(9-7-14)16-4-3-11-21-13-16/h3-4,6-9,11,13,17,22H,1-2,5,10,12,19H2,(H2,20,23)/t17-/m1/s1

InChIKey:

KSWNFCZKQDWGEE-QGZVFWFLSA-N

SMILES:

Software	SMILES
CACTVS 3.385	NCCCC[C@@H](NCc1ccc(cc1)c2cccnc2)C(N)=O
ACDLabs 12.01	O=C(N)C(NCc2ccc(c1cccnc1)cc2)CCCCN
OpenEye OEToolkits 1.9.2	c1cc(cnc1)c2ccc(cc2)CNC(CCCCN)C(=O)N
CACTVS 3.385	NCCCC[CH](NCc1ccc(cc1)c2cccnc2)C(N)=O
OpenEye OEToolkits 1.9.2	c1cc(cnc1)c2ccc(cc2)CN[C@H](CCCCN)C(=O)N

Name:

N~2~-[4-(pyridin-3-yl)benzyl]-D-lysinamide

ZINC:

ZINC000230470932

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).