SEQ2FUN

BioLiP

PDB CCD ID: A1BE1
Number of entries in BioLiP: 0
Chemical formula: C75 H102 Co N19 O14 P
InChI: InChI=1S/C62H90N13O14P.C13H13N6.Co/c1-29-20-39-40(21-30(29)2)75(28-70-39)57-52(84)53(41(27-76)87-57)89-90(85,86)88-31(3)26-69-49(83)18-19-59(8)37(22-46(66)80)56-62(11)61(10,25-48(68)82)36(14-17-45(65)79)51(74-62)33(5)55-60(9,24-47(67)81)34(12-15-43(63)77)38(71-55)23-42-58(6,7)35(13-16-44(64)78)50(72-42)32(4)54(59)73-56;1-2-10-3-5-11(6-4-10)12-9-19(18-17-12)8-7-16-13(14)15;/h20-21,23,28,31,34-37,41,52-53,56-57,76,84H,12-19,22,24-27H2,1-11H3,(H15,63,64,65,66,67,68,69,71,72,73,74,77,78,79,80,81,82,83,85,86);3-6,9H,7-8H2,(H4,14,15,16);/q;;+4/p-1/t31-,34-,35-,36-,37+,41-,52-,53-,56-,57+,59-,60+,61+,62+;;/m1../s1
InChIKey: LZCOEQPAIIHENT-WZHZPDAFSA-M
SMILES:
SoftwareSMILES
CACTVS 3.385C[CH](CNC(=O)CC[C]1(C)[CH](CC(N)=O)[CH]2[N+]3=C1C(=C4[CH](CCC(N)=O)C(C)(C)C5=[N+]4[Co]36(C#Cc7ccc(cc7)c8cn(CCNC(N)=N)nn8)[N]9C(=C(C)C%10=[N+]6C(=C5)[CH](CCC(N)=O)[C]%10(C)CC(N)=O)[CH](CCC(N)=O)[C](C)(CC(N)=O)[C]29C)C)O[P](O)(=O)O[CH]%11[CH](O)[CH](O[CH]%11CO)n%12cnc%13cc(C)c(C)cc%12%13
OpenEye OEToolkits 3.1.0.0Cc1cc2c(cc1C)n(cn2)C3C(C(C(O3)CO)OP(=O)(O)OC(C)CNC(=O)CCC4(C(C5C6(C(C(C7=C(C8=[N+]9C(=CC1=[N+]2[Co]9(N76)([N+]5=C4C(=C2C(C1(C)C)CCC(=O)N)C)C#Cc1ccc(cc1)c1cn(nn1)CCNC(=N)N)C(C8(C)CC(=O)N)CCC(=O)N)C)CCC(=O)N)(C)CC(=O)N)C)CC(=O)N)C)O
CACTVS 3.385C[C@H](CNC(=O)CC[C@]1(C)[C@@H](CC(N)=O)[C@H]2[N@+]3=C1C(=C4[C@@H](CCC(N)=O)C(C)(C)C5=[N@@+]4[Co]36(C#Cc7ccc(cc7)c8cn(CCNC(N)=N)nn8)[N@]9C(=C(C)C%10=[N@+]6C(=C5)[C@@H](CCC(N)=O)[C@]%10(C)CC(N)=O)[C@@H](CCC(N)=O)[C@](C)(CC(N)=O)[C@]29C)C)O[P](O)(=O)O[C@H]%11[C@@H](O)[C@H](O[C@@H]%11CO)n%12cnc%13cc(C)c(C)cc%12%13
OpenEye OEToolkits 3.1.0.0[H]/N=C(\N)/NCCn1cc(nn1)c2ccc(cc2)C#C[Co]345N6C7=C(C8=[N+]3C(=CC9=[N+]4C(=C(C1=[N+]5[C@@H]([C@]6([C@@]([C@@H]7CCC(=O)N)(C)CC(=O)N)C)[C@@H]([C@@]1(C)CCC(=O)NCC(C)OP(=O)(O)O[C@@H]1[C@H](O[C@@H]([C@@H]1O)n1cnc2c1cc(c(c2)C)C)CO)CC(=O)N)C)[C@H](C9(C)C)CCC(=O)N)[C@H]([C@]8(C)CC(=O)N)CCC(=O)N)C
Name:ethynyl-4-(4-phenyl-2,3,4-triazole)-guanidinium-cobalamin;
3-[(3~{R},4~{S},5~{S},9~{S},10~{S},15~{S},19~{R},20~{R},21~{R})-4,9,20-tris(2-azanyl-2-oxidanylidene-ethyl)-5,15-bis(3-azanyl-3-oxidanylidene-propyl)-1-[2-[4-[1-(2-carbamimidamidoethyl)-1,2,3-triazol-4-yl]phenyl]ethynyl]-19-[3-[2-[[(2~{R},3~{S},4~{R},5~{S})-5-[5,6-di(methyl)benzimidazol-1-yl]-4-$l^{1}-oxidanyl-2-($l^{1}-oxidanylmethyl)oxolan-3-yl]oxy-$l^{1}-oxidanyl-phosphoryl]oxypropylamino]-3-oxidanylidene-propyl]-3,4,7,9,14,14,17,19-octamethyl-2-aza-22,23,24-triazonia-1$l^{5}-cobaltaoctacyclo[11.9.1.1^{1,8}.0^{2,6}.0^{3,21}.0^{16,23}.0^{18,22}.0^{11,24}]tetracosa-6,8(24),11,13(23),16,18(22)-hexaen-10-yl]propanamide
Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).