BioLiP

PDB

BioLiP

PDB CCD ID:

A1I9E

Number of entries in BioLiP:

Chemical formula:

C40 H41 F3 N6 O5

InChI:

InChI=1S/C40H41F3N6O5/c1-4-27-30(42)10-7-22-13-26(50)14-28(32(22)27)34-33(43)35-29(17-44-34)36(46-38(45-35)54-21-40-11-6-12-48(40)18-23(41)15-40)47-19-24-8-9-25(20-47)49(24)31(51)16-39(3,5-2)37(52)53/h1,7,10,13-14,17,23-25,50H,5-6,8-9,11-12,15-16,18-21H2,2-3H3,(H,52,53)/t23-,24-,25+,39-,40+/m1/s1

InChIKey:

GINOIAWPJHXASS-SWJUONCMSA-N

SMILES:

Software	SMILES
CACTVS 3.385	CC[C](C)(CC(=O)N1[CH]2CC[CH]1CN(C2)c3nc(OC[C]45CCCN4C[CH](F)C5)nc6c(F)c(ncc36)c7cc(O)cc8ccc(F)c(C#C)c78)C(O)=O
OpenEye OEToolkits 2.0.7	CC[C@](C)(CC(=O)N1[C@@H]2CC[C@H]1CN(C2)c3c4cnc(c(c4nc(n3)OC[C@@]56CCCN5C[C@@H](C6)F)F)c7cc(cc8c7c(c(cc8)F)C#C)O)C(=O)O
CACTVS 3.385	CC[C@](C)(CC(=O)N1[C@@H]2CC[C@H]1CN(C2)c3nc(OC[C@@]45CCCN4C[C@H](F)C5)nc6c(F)c(ncc36)c7cc(O)cc8ccc(F)c(C#C)c78)C(O)=O
OpenEye OEToolkits 2.0.7	CCC(C)(CC(=O)N1C2CCC1CN(C2)c3c4cnc(c(c4nc(n3)OCC56CCCN5CC(C6)F)F)c7cc(cc8c7c(c(cc8)F)C#C)O)C(=O)O

Name:

(2~{R})-2-ethyl-4-[(1~{R},5~{S})-3-[7-(8-ethynyl-7-fluoranyl-3-oxidanyl-naphthalen-1-yl)-8-fluoranyl-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]pyrido[4,3-d]pyrimidin-4-yl]-3,8-diazabicyclo[3.2.1]octan-8-yl]-2-methyl-4-oxidanylidene-butanoic acid

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).