BioLiP

PDB

BioLiP

PDB CCD ID:

DDX

Number of entries in BioLiP:

Chemical formula:

C5 H9 O6 P

InChI:

InChI=1S/C5H9O6P/c6-5-2-1-4(11-5)3-10-12(7,8)9/h1-2,4-6H,3H2,(H2,7,8,9)/t4-,5-/m0/s1

InChIKey:

BSKKIMXBXBXIKI-WHFBIAKZSA-N

SMILES:

Software	SMILES
ACDLabs 10.04	O=P(OCC1OC(O)C=C1)(O)O
CACTVS 3.341	O[C@H]1O[C@H](CO[P](O)(O)=O)C=C1
OpenEye OEToolkits 1.5.0	C1=CC(OC1COP(=O)(O)O)O
CACTVS 3.341	O[CH]1O[CH](CO[P](O)(O)=O)C=C1
OpenEye OEToolkits 1.5.0	C1=C[C@H](O[C@@H]1COP(=O)(O)O)O

Name:

2',3'-DEHYDRO-2',3'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE

ZINC:

ZINC000058631944

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).