BioLiP

PDB

BioLiP

PDB CCD ID:

GPP

Number of entries in BioLiP:

Chemical formula:

C10 H20 O7 P2

InChI:

InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+

InChIKey:

GVVPGTZRZFNKDS-JXMROGBWSA-N

SMILES:

Software	SMILES
OpenEye OEToolkits 1.5.0	CC(=CCCC(=CCOP(=O)(O)OP(=O)(O)O)C)C
OpenEye OEToolkits 1.5.0	CC(=CCC/C(=C/CO[P@@](=O)(O)OP(=O)(O)O)/C)C
CACTVS 3.341	CC(C)=CCCC(/C)=C/CO[P@](O)(=O)O[P](O)(O)=O
CACTVS 3.341	CC(C)=CCCC(C)=CCO[P](O)(=O)O[P](O)(O)=O
ACDLabs 10.04	O=P(OP(=O)(OC/C=C(/CC\C=C(/C)C)C)O)(O)O

Name:

GERANYL DIPHOSPHATE

ChEMBL:

CHEMBL41342

DrugBank:

DB02552

ZINC:

ZINC000008215849

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).